similar to: R crashes when printing a named numeric vector of a specific class - Bug?

Hello, I'm most grateful for your time to read this. I have a uber size 30GB file of 6 million records and 3000 (mostly categorical data) columns in csv format. I want to bootstrap subsamples for multinomial regression, but it's proving difficult even with my 64GB RAM in my machine and twice that swap file , the process becomes super slow and halts. I'm thinking about generating

With reference to R News News: R version 3.0.0 (Masked Marvel) has been released on 2013-04-03. R version 2.15.3 (Security Blanket) has been released on 2013-03-01 R version 2.15.2 (Trick or Treat) .... R version 2.15.1 ("Roasted Marshmallows") ... R version 2.15.0 ("Easter Beagle") R version 2.14.0 ("Great Pumpkin") Dear R help List, How are these version types

Happy 2013! Can someone with more knowledge of edge case scoping/eval rules explain what is happening below? Happens in all the versions of R I have on hand. Behavior itself is confusing, but ?as.environment also provides no clue. The term used in that doc is 'search list', which is ambiguous, but the see also section mentions search(), so I would *think* that is what is intended.

Hi, I'm trying to get a package to pass through "R CMD check --as-cran" and have run into a problem that gives me no idea where to look to fix it. I'm running R version 15.1 on a Windows 7 64-bit machine, with the current set of Rtools. An attempt to check the package dies at the following step: * checking running R code from vignettes ... 'SIBER.Rnw'

Hi, Using R 2.15.1 on Windows 7. Have installed both versions 32 and 64bit. In both of them among others I have installed a package rgenoud When I open R gui of 32bit and write library(rgenoud) it responds by showing a functional rgenoud version 5.7-8. The same it does on Rgui 64bit. Now I am working in cygwin (v. 1.12.4.0) with xwin. Normally before when I had installed a package, I only had

( A similar problem is also reported by Sebastian P. Luque with library(maptools) library(trip) in the vignette as below ). I am writing a vignette which loads RMySQL and RPostgreSQL. This produces the warning: Loading required package: DBI Warning in .simpleDuplicateClass(def, prev) : A specification for class ?dbObjectId? in package ?RPostgreSQL? seems equivalent to one from package

> ?prompt [SNIP] ## Create a help file for each function in the .GlobalEnv: for(f in ls()) if(is.function(get(f))) prompt(name = f) > foo <- function(x) { cat(x, '\n')} > prompt(name="foo") Error in utils:::prompt(object, filename = filename, name = name, ...) : argument "object" is missing, with no default > version platform

Hi, I am trying to use the gettext() function to translate some text. I have never used this function before, so, it's entirely possible that I am doing something wrong. The issue that I am encountering is that gettext() properly translates some text, but not some other. Natural language was compiled in my R (installed from the Debian repositories): $ R R version 2.15.1 (2012-06-22) --

Hi, I am trying to use the gettext() function to translate some text. I have never used this function before, so, it's entirely possible that I am doing something wrong. The issue that I am encountering is that gettext() properly translates some text, but not some other. Natural language was compiled in my R (installed from the Debian repositories): $ R R version 2.15.1 (2012-06-22) --

Hello, I spent a lot of a time on a weird bug, and I just managed to narrow it down. In parallel code (here with parallel::mclappy, but I got it doMC/multicore too), if the library(tcltk) is loaded, R hangs when trying to open a DB connection. I got the same behaviour on two different computers, one dual-core, and one 2 xeon quad-core. Here's the code: library(parallel) library(RSQLite)

Hello everyone im trying to install Rmpi library on centos 6. I have already installed mpich2 1.4 [root@localhost ~]# R --version > R version 2.15.1 (2012-06-22) -- "Roasted Marshmallows" > Copyright (C) 2012 The R Foundation for Statistical Computing > ISBN 3-900051-07-0 > Platform: x86_64-redhat-linux-gnu (64-bit) [root@localhost ~]# mpich2version > MPICH2 Version:

I am installing R 2.15.1 onto RHEL 6, using gcc 4.7.0 with Intel MKL 10.3.7 and the following environment: export BLAS_LIBS="-Wl,--start-group /usr/caen/intel-12.1/mkl/lib/intel64/libmkl_gf_lp64.a /usr/caen/intel-12.1/mkl/lib/intel64/libmkl_sequential.a /usr/caen/intel-12.1/mkl/lib/intel64/libmkl_core.a -Wl,--end-group -lpthread" export LAPACK_LIBS="-Wl,--start-group

> From: Duncan Murdoch <murdoch.duncan at gmail.com> > Let's try it: > > > m <- (2/5)*2^32 > > m > 2^31 > [1] FALSE > > x <- sample(m, 1000000, replace = TRUE) > > table(x %% 2) > > 0 1 > 399850 600150 > > Since m is an even number, the true proportions of evens and odds should > be exactly 0.5.

I have been trying to install RMySQL on Windows 7 following the procedure at: http://biostat.mc.vanderbilt.edu/wiki/Main/RMySQL I think I have properly installed RTools and created a proper Renviron.site file saying: MYSQL_HOME="C:/Program Files/MySQL/MySQL Server 5.5" When I try to install the packages from source, I get warnings that suggest I'm still not quite "with the

I have installed Sweave as recommended. http://lifeasclay.wordpress.com/tag/sweave/. Placing a test.Rnw file, for instance, in "/Library/Frameworks/R.framework/Versions/2.15/Resources/library/utils/Sweave" generates test.tex files that generate pdf files with LaTeX. To be honest, placing Rnw files seem to make sense. The "exams" package does require not this step. It uses

Dear All, I'm trying to track down a very erratic bug in some fortran; I have an example that quite consistently segfaults on windoz, and more sporadically on mac, all in the course of doing some bootstrap calculations, varying the set.seed call, but I'm now trying to see what is going on on our redhat system: R version 2.15.1 (2012-06-22) -- "Roasted Marshmallows"

Hi, I'm using the XML package to scrape data and I'm trying to figure out how to eliminate the memory leak I'm currently experiencing. In the searches I've done, it sounds like the existence of the leak is fairly well known. What isn't as clear is exactly how to solve it. The general process I'm using is this: require(XML) myFunction <- function(URL) { html

In help(gc) I read, "...the primary purpose of calling 'gc' is for the report on memory usage". What memory usage does gc() report? And more importantly, which memory uses does it NOT report? Because I see one answer from gc(): used (Mb) gc trigger (Mb) max used (Mb) Ncells 14875922 794.5 21754962 1161.9 17854776 953.6 Vcells 59905567 457.1 84428913 644.2

Dear All, I need to do something relatively simple: generate a map of Europe and paint the various states with different colors (only 3-4 are needed) according to a rule. I would like to keep it as simple as possible and the script resorting to the sp package that I found at http://bit.ly/Oc71ub is exactly what I am looking for (I need to repeat the exercise with Europe instead of

In ?Sweave, it refers to Sweave User Manual. In the doc folder of utils package, I see "Sweave.pdf". However, I can't find it from within R > vignette("Sweave User Manual") Warning message: vignette ?Sweave User Manual? not found > browseVignettes("utils") No vignettes found by browseVignettes("utils") > library(help=utils) does not