similar to: latex \subfloat{} incompatible with sweave/knitr code

Hi there! I have found a trange problem with getting pairs()-plots to show properly in latex \subfloat environments. If i generate images of these plots with pdf() and include them in subfloats, they will either show up in grayscale, or sometimes the datapoints of the pairplots are missing. Mind you, the PDFs themselves are properly colored and look perfectly fine, both as pdf-image in acrobat

I am using Sweave to generate a document in which ggplot2 figures are embedded. I am using the following code in a particular plot within a subfloat environment: <<qplotARbosreg, echo = FALSE, fig = TRUE>>= print(qplot(bosday2, Arday2, data= arbostimearonlyNArm, colour=factor(bos2), shape=factor(bos2), size=factor(cumARscore), position="jitter", main="Days to BOS by

Dear R helpers, I am using knitr to run analysis with R and edit my document with Latex. I am wondering whether there is a way to include 2 or more pictures per chunk and being able to refer them in the text independently and eventually whether it is possible to give them different captions. Let me give you an example.Rnw: \documentclass{article} \title{Example} \author{FS} \begin{document}

The owner of a folder (userid gdunn01) is unable to make any changes to it (rename / delete) through Samba despite being listed as having read/write perms. I'm using winbind for username mapping. I feel like I'm missing something simple. ma21cab5# wbinfo -t checking the trust secret via RPC calls succeeded ma21cab5# ls -ld asdfas/ drwxr-xr-x 2 gdunn01 Domain Users 512 Jun 22 08:50

http://bugzilla.mindrot.org/show_bug.cgi?id=585 Summary: sshd core dumping on IRIX 6.5.18 with VerifyReverseMapping enabled Product: Portable OpenSSH Version: -current Platform: MIPS OS/Version: IRIX Status: NEW Severity: major Priority: P2 Component: sshd AssignedTo:

We're using Samba 3.0.21a-1 on a CentOS 4.2 server (kernel 2.6.9-22.0.2.ELsmp); everything works more or less fine, it's functioning as the PDC with an OpenLDAP back end (setup essentially straight from the Idealx.org playbook), etc. We're trying to mount Windows shares to back them up, and getting "permission denied" errors when trying to read certain files from those

Hi all, after installing samba 2.2.5 (on Solaris8 running NIS+) it is not possible to create user entries in smbpasswd. I generated the smbpasswd file by # cat /dev/null | /samba/samba-2.2.5/source/script/mksmbpasswd.sh > /usr/local/samba/private/smbpasswd ----- then tried to create user entry "dummy" in smbpasswd by (user "dummy" exists under NIS+) # smbpasswd -a dummy

Hola. Pare que RStudio y el paquete markdown no nos terminamos de entender. - Creo un fichero Rmd, con el botón: "Kntr to Html" (ctr+Shift+Y), se pre-visualiza genial: formulas (, highlight_code,...)... todo bien. Pero quiero ponerle un TOC tb, así que como en su día me comento Jose Luis Cañadas en este foro, hago un desde el fichero md que crea la previsualización ("Kntr to

I'm writing a book using Sweave which includes Unicode characters which R's postscript and pdf graphics devices don't handle properly. The cairo graphics device does handle these characters properly. Thus I'd like to be able to instruct Sweave to use cairo (either sometimes or always) to produce graphics when it processes R code. Is this possible? Many thanks, Roger Levy --

Question for R users under unix: Do you ever edit figs created by R using xfig or some other program? I tried to edit a figure with xfig (a program which I find quite horrible by the way) and it said it couldn't read it in. I guess xfig has no capability of reading postscript files? Can anyone tell me how to do it, or perhaps suggest another freeware structured drawing program for use in

The knitr package version 0.5 is on CRAN now. It has gone through extensive development in the past few months, and about 200 issues were solved (https://github.com/yihui/knitr/issues) thanks to the feedback of users, which greatly improved the quality and usefulness of this package. For a complete list of changes, see https://github.com/yihui/knitr/blob/master/NEWS Most notable new features are:

The knitr package version 0.5 is on CRAN now. It has gone through extensive development in the past few months, and about 200 issues were solved (https://github.com/yihui/knitr/issues) thanks to the feedback of users, which greatly improved the quality and usefulness of this package. For a complete list of changes, see https://github.com/yihui/knitr/blob/master/NEWS Most notable new features are:

Hello guys, I'm new to knitr and to R in general. I'm using RStudio and knitr, both the latest version. I am trying to produce an html page with multiple graph, which has a url reference to each of them that bring us lower on the page. For those produce separately it is pretty easy, since I just include the html location like I did for graph 1. But in a loop, I am struggling to

Hola a todos. Voy a hacer una pregunta sin mucha importancia, pero quería saber si a alguien más le pasa. Acabo de actualizar el paquete knitr y resulta que antes, al pasar un chunk a pdf, coloreaba en naranja los parámetros de las funciones. Por ejemplo si ponía modelo <- glm( var1 ~ var2, data=datos, family=binomial) data y family los colereaba en naranja, pero ahora ya no. Los

I'd say it is an expert-only option. If you do not understand what it means, I strongly recommend you not to set it. Similarly, you set the root_dir option and I don't know why you did it, but it is a typo anyway (should be root.dir). Regards, Yihui -- https://yihui.name On Fri, Jun 9, 2017 at 4:50 AM, <G.Maubach at gmx.de> wrote: > Hi Yi, > > many thanks for your reply.

Hola, estoy usando knitr en un documento latex, pero me gustaría aumentar el tamaño de la fuente del "output" (creo que por defecto usa "normalsize"). Alguien puede decirme como cambiar esta opción. Muchas gracias. Manuel [[alternative HTML version deleted]]

Muchas gracias Daniel. Era eso lo que buscaba. El 13/12/2013 14:18, daniel escribió: > Manuel, > Los cambios los puedes hacer desde el chunk > << size = 'LARGE' >> > o lo puedes hacer para todos los chunk cambiando las opciones de éstos dentro de un chunk de código > opts_chunk$set(comment=NA, fig.width=6, fig.height=6, size='Large')), > No

A mi también me compila en RStudio en Mac. Parece que el problema no está en el documento. Un saludo Gregorio El 23 de diciembre de 2013, 6:50, <morales@us.es> escribió: > Hola, no se si es este el sitio apropiado para mi consulta, pero igual > alguien también ha tenido el mismo problema. > > Estoy preparando un documento con knitr a través de Tinn-R y WinEdt. Todo > va

Hola: El 24/12/13 10:36, morales en us.es escribió: > > > Si, por eso no sabie muy bien si el problema se podía resolver en la > lista de R. Me da la impresión que es algún tipo de incompatibilidad > entre los paquetes de > > latex y los valores por defecto que usa knitr > para producir el resultado. Como dije antes, lo que no me cuadra es que > sólo sea con la

Dear Mick, Note that both knitr and rmarkdown are listed under Suggests: both are required to compile the vignette. Installing rmarkdown should solve the problem. If not, please provide more information. OS, R version, digest version, ... Best regards, ir. Thierry Onkelinx Instituut voor natuur- en bosonderzoek / Research Institute for Nature and Forest team Biometrie & Kwaliteitszorg / team