similar to: Sweave: R chunk inside caption?

I created a tex file following the example in the Sweave help which produced the following files in my working directory. Sweave-test-1-006.eps Sweave-test-1-006.pdf Sweave-test-1-007.eps Sweave-test-1-007.pdf Sweave-test-1.tex When I run latex on this, I get a latex error, log file below. I am running R 2.1.1 on Windows XP. I have installed "small MiKTeX" and I have added

Hello Folks, When I run the document below through sweave, rgui.exe/rsession.exe leaves a file handle open to the sweave-001.pdf graphic (as verified by process explorer). Pdflatex.exe then crashes (with a Permission Denied error) because the graphic file is locked. This only seems to happen when there is an error in the sweave document. When there are no errors, no file handles are left open.

An Sweave file, 'test.Rnw': \documentclass{article} \title{Sweave minimal} \author{MK} \begin{document} \maketitle We try Sweave: <<1>>= data(airquality) summary(airquality) x <- airquality[1, 1] @ I try Sexpr: \Sexpr{x} We plot: \begin{center} <<2, fig=TRUE, echo=FALSE >>= boxplot(Ozone ~ Month, data = airquality) @ \end{center} \end{document} I check the

I think I've gotten my Emacs/Sweave/R system set up correctly, thanks to Vincent and Jim, but I haven't been successful getting my first document produced. I'm trying to use one of Friedrich Leisch's examples, http://www.ci.tuwien.ac.at/~leisch/Sweave/example-1.Snw. I cut and pasted the text into a document sweaveexample.Rnw in Emacs. It seemed to be processed successfully with R:

Hi, I created a Sweave file (see below). when I want to convert tex file generated from it into pdf, I get error message as follows: > texi2dvi("test.tex", pdf=TRUE) Error in texi2dvi("test.tex", pdf = TRUE) : Running 'texi2dvi' on 'test.tex' failed. LaTeX errors: ! Undefined control sequence. l.8 \begin {Schunk} ? ! Interruption. !

I'm trying to learn Sweave. So far things are going well with the chunks of code identified by << >>= But I'm having trouble with the in-line text use of \Sexpr. Here is a short example .Rnw file: \documentclass[12pt]{article} \usepackage[margin=1.25in]{geometry} \usepackage{graphicx} \usepackage{Sweave} \begin{document} <<test>>= pnorm(1) @ \Sexpr{2+6}

R users, I'm at a loss with a problem considering running .tex files produced by Sweave. When I run (R 2.7.0): --------------------------------------------------- #Taken from ?Sweave testfile <- system.file("Sweave", "Sweave-test-1.Rnw", package = "utils") ## enforce par(ask=FALSE) options(device.ask.default=FALSE) ## create a LaTeX file Sweave(testfile)

Dear R-help, I would like to include the documentation of an R function in an *.rnw document processed by Sweave. Because I'm sharing my *.rnw files with colleagues under Linux and Windows (I'm on Mac OS X), I would like a pure R solution. The naive approach doesn't work, because Sweaving this *.rnw file: -------- tmp.rnw -------- \documentclass{article} \begin{document}

Dear All, I try to use Sweave to make a document. But when I use the Sweave() command on it and build a pdf with pdflatex (3.141592-1.40.3) my apostrophes are replaced by some gibberish (an 'a' with a hat on it, a capital A with a arc pointing upwards on it and a capital Y with two points on it). If I manually replace the apostrophes using the keyboard, I get a different looking

Dear R-community, I'm using Sweave to produce reports. The reports require the "axis" command. When I run axis the program returns NULL as well as creating the axis. > plot(1:4, rnorm(4), axes=FALSE) > axis(1, 1:4, LETTERS[1:4]) NULL > So, my Sweave tex files have \begin{Schunk} \begin{Soutput} NULL \end{Soutput} \end{Schunk} in front of each graphic that requires

Hi there, I'm rying to 'turn' an Schunk in an .Rnw file(Xemacs-21.4.13, ESS-5.2.8, R-2.1, miktex-2.4.1705). Has anyone got the isorot package to work with Sweave? JC example test.Rnw: \documentclass[a4paper]{article} \usepackage{Sweave} \usepackage{isorot} \rotdriver{dvips} \clockwise \title{Sweave Example 1} \author{apologies to Friedrich Leisch } \begin{document} \maketitle

Hello all, Sometimes I get to make an R code chunk (in Sweave) which is longer then the margins of the page. Is there a way to force it to "go to the next line" (in Sweave) once that happens? Here are two cases this happens in the resulting .tex file (one is a "hard" case, and the other is simpler) \begin{Schunk} \begin{Sinput} >

Hi list, I was using Sweave and was wondering if anyone has had any luck changing the font colors of the code chunks. For instance, in my .Rnw preample I tried including: === \usepackage[usenames]{colors} \definecolor{darkred}{rgb}{0.545,0,0} \definecolor{midnightblue}{rgb}{0.098,0.098,0.439} \DefineVerbatimEnvironment{Sinput}{Verbatim}{fontshape=sl,formatcom={\color{midnightblue}}}

I find Sweave very useful and I was trying to combine it with the latex package fancyvrb. I was trying to get line numbering and labels in order to reference the lines where particular commands occur. Unfortunately, I haven't been able to figure out how to do it. Maybe somebody can help me. The following is a sample Rnw file: the first part shows what I would like to get, the second what I

Is there an elegant way to get Sweave to center graphics by default? I'd like to use \centerline{\includegraphics{}} etc. to save some vertical space that \begin{center} ... \end{center} uses, and I'd like to avoid centering with each <<fig=T>>= Thanks Frank -- Frank E Harrell Jr Professor and Chair School of Medicine Department of

Dear useRs-- I have been using Sweave with miktex for years, but on a new install on Windows XP, miktex seems to be hung up on single quotes. See example below. Digging through stackexchange, I found using \usepackage[noae]{Sweave} in the tex file solved the problem. My questions are: --Why would this happen? I have the ae package installed. --If inserting [noae] is the solution, how do I

In an Sweave slide, I want to use sem::read.moments() and sem::specify.model(), which work by using scan() to read the following lines, up to the first blank line. However, Sweave throws an error: > Sweave("sem-thurstone.Rnw") Writing to file sem-thurstone.tex Processing code chunks ... 1 : term hide (label=arrests-setup) 2 : echo term hide (label=thurstone-data) Error:

Dear all, I have trouble with R-beta sweaving files that include definitions with \SweaveInput in combination with keep.source = TRUE Symptom: SInput is taken from too far down the input file (the shift is the number of lines of the included file). Is that known? Searching didn't turn up anything, yet I think there are more people than just me using keep.source. Example: $

I have found a quite strange (to me) behaviour in Sweave. It only occurs in the following situation: 1. define a variable in one chunk 2. use it within a subsequent figure-generating chunk 3. delete it at the end of that same chunk Then the Sweave driver chokes, not finding the variable name when generating the figure Example: % document bug2.Rnw \documentclass{article} \usepackage{Sweave}

Dear developers, I have come across a (somewhat strange) change in the encoding of Sweave output from R-2.9.2pat to R-2.10.0beta (apparently specific to Rgui) on Windows installations. Of course, the NEWS file contains quite a few changes concerning encoding, but I was not able to locate an entry which explains the observed behaviour. I am not very familiar with encodings/locales/codepages,