similar to: Question on EBImage package

Hi, I have an S4 class directly derived from 'array' as shown in the code below (EBImage package of Bioconductor 2.1, devel), it simply contains array adding a couple of slots: setClass ("Image", representation (colormode="integer", filename="character", compression="character", resolution="numeric", features="list" ),

Hello, Working with Windows 7 in a HP laptop with R-2.10.1 I download and installed ImageMagick-6.3.7.7-Q16-Windows-dll.exe and GTK 2.12.9-win32-2, then downloaded and installed from local file EBImage_3.2.0.zip and I got: > library(EBImage) Loading required package: abind Error in inDL(x, as.logical(local), as.logical(now), ...) : unable to load shared library

Hello all I've just spent a few joyless hours trying to get EBImage to install in R. I'm running Ubuntu (Hardy Heron), fully updated (including R and Imagemagick). EBImage installation seems to work, but when I 'library(EBImage)' I get the following: - - - - Error in dyn.load(file, DLLpath = DLLpath, ...) : unable to load shared library '/home/qilin/R/i486-pc-linux-

Hi group, I've spent half a day trying to figure this out and searched through different forums. I've tried to load EBImage but am getting the following problem: >Error in inDL(x, as.logical(local), as.logical(now), ...) : > cannot initialize ImageMagick >Error: package/namespace load failed for 'EBImage' My path is like this: C:\\Program

On Wed, Aug 13, 2008 at 6:56 AM, Laurent Gautier <lgautier@gmail.com> wrote: > There is a chance that further changes in the handling of plotting > devices event appear; > I think that there is an ongoing effort to bring new features for R-2.8. > > What about bumping that to r-devel ? (Sorry if you already did and I missed > it). > The solution you came up with could be

Hello, I've been having some trouble working with the aroma package and have realized that it's my ebimage is at the root of the problem. The package builds but during testing it fails because of an undefined symbol as seen below: installing to /usr/local/lib64/R/library/EBImage/libs ** R ** inst ** preparing package for lazy loading ** help *** installing help indices **

Hi, on Windows XP Pro with R version 2.7.1 Patched (2008-06-27 r46012) the 'Cairo' and the 'EBImage' packages does not play well together. Loading EBImage before Cairo cause the following to happen: # Rterm --vanilla > library(EBImage); > library(Cairo) Error in inDL(x, as.logical(local), as.logical(now), ...) : unable to load shared library

Dear all, Following a suggestion by Henrik Bengtsson I installed EBImage/biocondutor package. I also installed ImageMagick and GTK software because EBImage need it. After look at EBImage I find a function that compute Haralick texture on images. I tryed to run it with following simulated image, but I get error. myimage<-as.Image(matrix(sample(100*100),nc=100)) image(myimage)

Dear R users, In last R News, a new package was appeared. EBimage image processing package seems so powerful. But in R News, it is used for the images of cells under microscope. So, i wonder whether there is anyone who use this package for materials science applications such as determination of mean diameter of particles, fibers or pores, estimation of porosity or covering factor. Sincerely...

Hello, I try to write a bash skript and I want to use the variables from my bash skript into R. Ist that possible? My bash skript creates lots of *.data files. I want forward these files directly into R (in x.data.bz2), so that R creates a few data automatically also in PDF. For example: bash created files: hello.data , world.data how R created these files in pdf? please look my plot.R

Dear all, I'm pleased to announce the release on CRAN of the "mmand" package (for Mathematical Morphology in Any Number of Dimensions). It provides functions for performing mathematical morphology (erode, dilate, etc.), smoothing, and other kernel-based operations on array-like objects of any dimensionality. The package is centred around a flexible function called morph(), which can

Dear all, I'm pleased to announce the release on CRAN of the "mmand" package (for Mathematical Morphology in Any Number of Dimensions). It provides functions for performing mathematical morphology (erode, dilate, etc.), smoothing, and other kernel-based operations on array-like objects of any dimensionality. The package is centred around a flexible function called morph(), which can

I am trying to create a set of wavelets in frequency space--namely Cauchy wavelets for an intensity analysis (von Tscharner, 2000). The wavelets are defined by the following formula: [(f/cf)^(cf*scale)]*[e^((-f/cf)+1)^(cf*scale)] where *f *is frequency of length *n*, *cf* is center frequency (defined below) and is an array of *j *columns and *n* row, and scale is a constant. cf = (1/scale)*(j

Hi, I am analyzing a data set with greater than 1000 independent cases (collected in an unrestricted manner), where each case has 3 variables associated with it: one, a factor variable with 0/1 levels (called XX), another factor variable with 8 levels (X) and a third response variable with two levels (Y: 0/1). I am trying to see if X1 has an effect on the relationship between X2 and the

I''m trying to display a generated .png plot via send_data(), but it results in a server error "invalid byte sequence in US-ASCII" error. I''m pretty sure this means that I need to specify the encoding somewhere, but I haven''t been able to figure out where or how to do so. Some particulars: I''m running gnuplot through a pipe to generate a plot in .png

Hi R community I have a question. I'll explain my situation. I have to build a climate model to obtain monthly and annual temperature from 2004 to 2008 from a specif area in Almeria (Spain). To build this climate model, I will use Multiple regression. My dependant variable will be monthly and annual temperature and independant variables will be Latitute, Longitude and Altitude and I will work

Hi, I am working on writing some S4 classes that represent multidimensional (brain) image data. I would like these classes to support standard array indexing. I have been studying the Matrix and EBImage (http://www.bioconductor.org/packages/1.9/bioc/html/EBImage.html) packages to see how this is done. When using objects of the "array" class directly, R distinguishes between the calls:

Dear Sir/Madam, I am using R-Image in an MSc statistics dissertation and have found, in various EBImage manuals a functions - bwimage, which I would like to use, however I can't find it within my version of R. Could you tell me if the function has changed or what I need to do to be able to use it. Many thanks Alice [[alternative HTML version deleted]]

Hi, I am looking for a R package which is capable to process and analysis pictures of tissues (stained) in an automatic way. I had a look on biops and EBImage (Bioconductor) but they are not automatic... Did you already use/know a such package ? Thanks, - Martial _________________________________________________________________ Tchattez en direct en en vidéo avec vos amis !

Sorry I meant bwlabel on this message Alice --- On Wed, 24/6/09, aliceduggan@btopenworld.com <aliceduggan@btopenworld.com> wrote: From: aliceduggan@btopenworld.com <aliceduggan@btopenworld.com> Subject: bwimage To: r-help@r-project.org Date: Wednesday, 24 June, 2009, 12:34 PM Dear Sir/Madam, I am using R-Image in an MSc statistics dissertation and have found, in various