similar to: questions on R CMD INSTALL et al

Hello, After reinstalling the whole OS and R as well, I tried to update.packages() and get the follwing error message: concerning the mgcv update: atlas2-base is installed and blas as well (on debian). I haven't found lf77blas, I assume it's a library or something similar associated with blas. any suggestion how to solve that, thanks Martin * Installing *source* package

Hi I just upgraded my debian/stable to R 2.7.1 via apt-get install r-base r-base-core r-base-dev, and then began to update.packages() > update.packages(lib.loc="/usr/local/lib/R/site-library") > update.packages(lib.loc="/usr/lib/R/library") but I get: .... * Installing *source* package 'mgcv' ... ** libs gcc -std=gnu99 -I/usr/share/R/include -fpic -g

Qusetion #1 ********* Model selection in GAM can be done by using: 1. step.gam {gam} : A directional stepwise search 2. gam {mgcv} : Smoothness estimation using GCV or UBRE/AIC criterion Suppose my model starts with a additive model (linear part + spline part). Using gam() {mgcv} i got estimated degrees of freedom(edf) for the smoothing splines. Now I want to use the functional form of my model

Updating my 1.8.0 R installation (>update.packages() ) I obtain the following (SORRY FOR THE LENGTH OF THE LOG BUT IT HELPS!!!): ................ downloaded 135Kb KernSmooth : Version 2.22-11 in /usr/lib/R/library Version 2.22-12 on CRAN Update (y/N)? y mgcv : Version 0.9-3.1 in /usr/lib/R/library Version 0.9-6 on CRAN Update (y/N)? y trying URL

Greetings I run into a compilation error when updating to mgcv_1.1-7 in R 2.0.0 on OS X 10.3. Note that other pacakges have compiled nicely. Some details are given below, but in short it looks like it's seeking for /usr/local/lib/powerpc-apple-darwin6.8/3.4.2/ which I don't have. But I do have /usr/lib/gcc/darwin/3.3 i.e a lower version of GCC in a different directory. More

Sending again. Can somebody please take a look and let me know is this is doable? Folks, We have glusters with version 3.8.13 and we are using that for RMAN backups. We get errors/warnings, RMAN-03009: failure of backup command on C1 channel at 03/28/2018 16:55:43 ORA-19510: failed to set size of 184820 blocks for file

Hola a toda la comunidad R, el siguiente problema tengo para hacer funcionar el paquete Spatstat. Tengo instalado R version 2.15.0, y Ubuntu 12.04 los cuales ya lo actualice. El paquete (spatstat) esta instalado pero puntualmente es problema es asi: / > library("spatstat") Loading required package: mgcv Error : .onLoad failed in loadNamespace() for ''Matrix'',

With the standard setup unchanged from 2.7.2, I am seeing make[3]: Leaving directory `/tmp/buildd/r-base-2.8.0~20081005/po' make[2]: Leaving directory `/tmp/buildd/r-base-2.8.0~20081005/po' you should 'make docs' now ... make[2]: Entering directory `/tmp/buildd/r-base-2.8.0~20081005/doc' make[3]: Entering directory `/tmp/buildd/r-base-2.8.0~20081005/doc/manual' make[3]:

Hi, When attempting to restore to LINUX RHEL5 - OCFS2 filesystem received the following error during RMAN restore for nearly all of the datafiles attempted to restore with exception of a couple of smaller datafiles which were smaller < 2GB. ORA-19870: error reading backup piece /db/dumps/TR1_1/rmanbackup/TR1_88_1 ORA-19502: write error on file "/db/devices/db1/PR2/pr2_1/pr2.data1",

Afternoon, We have an ocfs2 release 1.4 filesystem shared between two nodes (RHEL5). The filesystem in question is used exclusively for Oracle RMAN backups. A df -h shows the following: [root at imsthdb07 ~]# df -h /data/orabackup Filesystem Size Used Avail Use% Mounted on /dev/mapper/eva_mpio_myserver07_08_oracle_bkup0 250G

Dear list, I do apologize if these are basic questions. I am fitting some GAM models using the mgcv package and following the model selection criteria proposed by Wood and Augustin (2002, Ecol. Model. 157, p. 157-177). One criterion to decide if a term should be dropped from a model is if the estimated degrees of freedom (EDF) for the term are close to their lower limit. What would be the

We're using RMAN to back up our 9.2 RAC database to an OCFS v1 volume. We have an existing shell script that we use for copying files from disk to tape via tar, one file at a time. (Don't ask why. It's a legacy script. Long story.) We're tweaking this script to use --o_direct when tarring the file to tape and that seems to be working fine: # tape device is /dev/nst0 $ tar

Hi, In the help files in the ?mgcv package for the gam.control() function, there is an option irls.reg. The help files describe this option as: For most models this should be 0. The iteratively re-weighted least squares method by which GAMs are fitted can fail to converge in some circumstances. For example, data with many zeroes can cause problems in a model with a log link, because a mean of

hi Using a ts or tprs basis, I expected gcv to decrease when increasing the basis dimension, as I thought this would minimise gcv over a larger subspace. But gcv increased. Here's an example. thanks for any comments. greg #simulate some data set.seed(0) x1<-runif(500) x2<-rnorm(500) x3<-rpois(500,3) d<-runif(500) linp<--1+x1+0.5*x2+0.3*exp(-2*d)*sin(10*d)*x3

We are in the process of upgrading to OCFS2. We have recently restored our Production Database to a Development platform configured with OCFS2 with RMAN. No problems. As for the Production migration, we understand that you cannot mount an OCFS volume (our current configuration) with OCFS2. We are interested in mounting an EXT3 file system, performing a cold RMAN backup, copying the datafiles

Dear useRs, I reran an analysis with bam (mgcv, version 1.7-17) originally conducted using an older version of bam (mgcv, version 1.7-11) and this resulted in the same estimates, but much lower standard errors (in some cases 20 times as low) and lower p-values. This obviously results in a larger set of significant predictors. Is this result expected given the improvements in the new version? Or

-----BEGIN PGP SIGNED MESSAGE----- Hash: SHA1 Folks, quick question. In our current 3 node RAC cluster we have 2 ocfs2 volumes setup. We have a volume for sharing oracle CRS files (ocr.crs and vote.crs) and a 2nd volume is going to be used to store backups and archivelogs. We will copy backups and archivelogs via RMAN from the flash recovery area, onto this volume .. and eventually gets

Greetings, I have a computer with the following setup: 1)cblfs (pure 64-bit (amd64) linux), kernel2.6.34 gcc4.4.2 2)R-2.11.1 I compiled R with BLAS and lapack using the switched ( --with-blas="- lpthread -latlas -lfptf77blas" --with-lapack="-llapack -lcblas" ). (( http://cran.r-project.org/doc/manuals/R-admin.html#Linear-algebra) ) Prior to compiling R-2.11.1 sh

Hi All: I tried to update the package mgcv from my current version 1.1-8 to mgcv version 1.2. Using the command update.packages("mgcv") to update mgcv failed in my computer and the returning message was: "Error in old.packages(lib.loc=lib.loc, contriburl=contriburl, method=method, :no installed.packages for (?invalid) lib.loc=mgcv" When I typed installed.packages(), I got

Hi all, I am running into a problem installing a package. I am using a Mac with OSX 10.5.8 I have been using mgcv for gam models, it has been working fine. The mgcv listed in my directory of R packages (Package Manager) does not load up and I receive the following: Error in dyn.load(file, DLLpath = DLLpath, ...) : unable to load shared object