Displaying 20 results from an estimated 1000 matches similar to: "issue with Rd2pdf and \Sexpr in Rd files"
2009 Apr 24
2
Error building package: LaTeX error when creating PDF version
Hi all
I am trying to build an R package, which I have successfully done many times before, but have an error I cannot trace. I hope someone can help me.
Here's is some edited output (full output below if it is useful):
pdunn2 at PDunnUbuntu:~/DSdata$ R CMD build GLMsData
* checking for file 'GLMsData/DESCRIPTION' ... OK
* preparing 'GLMsData':
* checking DESCRIPTION
2018 May 30
0
CentOS 7 issues with pdf manual / tex conversion
On 05/29/2018 04:53 PM, Dirk Eddelbuettel wrote:
> I noticed it with a local, not-public package -- but it appears to apply with
> any source package. I replicated with pkgKitten straight off CRAN and after
> checking that it has a six page manual there.
I'm having trouble reproducing this one. In my fresh CentOS 7 VM, I can
pull the pkgKitten source down, and run R CMD Rd2pdf
2018 May 29
2
CentOS 7 issues with pdf manual / tex conversion
On a CentOS 7 machine, I am at a loss with respect to an inability to run a
full R CMD check as anything involving tex files ends in tears.
We followed the README at CRAN and installed a large number of tex-live
packages on this machine. But when a manual is created, we end up with what
follows below. Here, I chopped some of the error messages, the key seems to
be 'Insufficient extension
2018 May 29
2
CentOS 7 issues with pdf manual / tex conversion
On 29 May 2018 at 16:37, R P Herrold wrote:
| On Tue, 29 May 2018, Dirk Eddelbuettel wrote:
|
| > On a CentOS 7 machine, I am at a loss with respect to an inability to run a
| > full R CMD check as anything involving tex files ends in tears.
|
| Hi, Dirk
|
| Have fun at the upcoming conference at UIC
|
| I seem to have 56 font packages installed under CentOS 7
| locally, but then I work
2018 May 30
2
CentOS 7 issues with pdf manual / tex conversion
Tom,
On 30 May 2018 at 11:34, Tom Callaway wrote:
| On 05/29/2018 04:53 PM, Dirk Eddelbuettel wrote:
| > I noticed it with a local, not-public package -- but it appears to apply with
| > any source package. I replicated with pkgKitten straight off CRAN and after
| > checking that it has a six page manual there.
|
| I'm having trouble reproducing this one. In my fresh CentOS 7 VM, I
2010 Jun 16
5
Latex and r
Dear R?ers
I?m trying to get a summary table using latex and summary in the rms package to no avail. I?m running R 2.10.1, Mac OS X snow leopard and I have the mactex 2009 distribution installed. Any obvious things I?m missing?
//M
options(digits=3)
set.seed(173)
sex <- factor(sample(c("m","f"), 500, rep=TRUE))
age <- rnorm(500, 50, 5)
treatment <-
2010 Sep 15
1
running 'make' failed during vignette creation ('R CMD build') on Windows
Hi,
This is a follow-up to the problem reported here:
https://stat.ethz.ch/pipermail/r-devel/2010-September/058460.html
After I updated R-2.12 to 2010-09-13 r52905 on the Bioc build system,
some of the packages that have a Makefile in <pkg>/inst/doc still
don't build on Windows. For example, 'R\bin\R.exe CMD build adSplit'
gives:
* checking for file
2004 Mar 28
2
Build problems on Windows with fpTeX and MiKTeX
Recently,
I upgraded MiKTeX to the latest versions, and since then there are
problems when I try to build R and/or R packages.
I tried to build R 1.9.0 beta and R 1.8.1 patched
I am running Windows XP Pro, SP 1
MikTeX version is
This is e-TeX, Version 3.141592-2.1 (MiKTeX 2.4)
(preloaded format=latex 2004.3.27)
fpTeX version is
This is e-TeXk, Version 3.141592-2.1 (Web2c 7.5.2)
(format=latex
2015 Jan 08
2
latex warning
Dear all,
I am getting an R CMD check warning about the PDF manual. I am having a
hard time finding out what is wrong, here is the log of the Rd2pdf call.
The full check (and other) log is at
https://api.travis-ci.org/jobs/46373922/log.txt?deansi=true if anybody is
interested, and the package itself is here:
https://github.com/metacran/r-builder/tree/bintex/rbuildertest
Thanks, Best,
Gabor
2014 Jun 04
1
Package keyval Error: noupquote undefined
Hi,
Due to a change in Rd.sty a few days ago
(https://github.com/wch/r-source/commit/620eb9a#diff-3bf3d821c6faae50cd6ec931f6f63296L272),
the default installation of TeXLive 2009 or 2012 no longer works when
building Rd to PDF. The error log is like this:
===============
Converting Rd files to LaTeX .....
Creating pdf output from LaTeX ...
Error in texi2dvi(file = file, pdf = TRUE, clean = clean,
2009 Dec 09
2
Recent TeX changes and R/package manuals
As some of you will be aware, TeXLive 2009 was released last month
having blocked updates on earlier versions since May. This has lead
to a flood of updates of LaTeX packages, as a result of which the
PDF manuals of R 2.10.0 and earlier will no longer build, for two
separate reasons.
For MiKTeX users: at least version 2.8 (the current one) has the same
updates (a week or so later) and has
2002 Jan 18
1
TeX error generated by R CMD CHECK
Hello,
can anyone explain the following error I get when trying to
use the CHECK command to check a new version of my pakcage under 1.4.0?
******
./R CMD check ~/GLMMGibbs.0.5.1/GLMMGibbs
* checking for working latex ... OK
* using log directory `/homef/jonm/R-1.4.0/bin/GLMMGibbs.Rcheck'
...
<Installs library, documentation, and then performs various tests,
including the example,
2008 Apr 09
1
Windows problem related to using shortPathName for Sweave style file
In the process of updating R to R 2.7 alpha or R 2.7 beta for the
BioConductor 2.2 builds on Windows, I have hit a snag because the BioC
build system has long path names (e.g. D:\biocbld\bbs-2.2-bioc\R) and
these path names are not resolving properly by MiKTeX 2.7 during
vignette construction. Take, for example, the attached vignette from
Biobase, Bioconductor.Rnw. I have built R from source
2009 Apr 16
2
there are fontencoding problem in Sweave
I want write article by russian language using Sweave. For cyrillic text
LaTeX use T2A encoding
\usepackage[T2A]{fontenc}
But in Sweave.sty we find:
\RequirePackage[T1]{fontenc}
It is source of critical problem.
For example Rnw file
$ cat estimation.Rnw
\documentclass[A4paper]{article}
\usepackage[T2A]{fontenc}
\usepackage[utf8]{inputenc}
\usepackage[russian,english]{babel}
2008 Oct 24
0
Problem with "plflatex wrapper.tex"
Hi, All:
I encountered problems running "pdflatex wrapper.tex", as
suggested on "www.r-project.org" -> Newsletter -> (near the bottom of
the page). After 220 lines of seemingly successful processing, I got an
error copied below. I hit <enter> a few times, and the "pdflatex"
finished, apparently successfully.
Comments?
Thanks,
2002 Jul 17
2
Problems with make pdf (R-patched_2002-07-15.tar.gz)
After configure, make and make check on
a linux Suse 7.3 box, I run
make dvi and make info with no problems but get
a lot of garbage to my screen during make pdf.
Is this normal? Is there a bug in this part
of the installation?
This is part of what I get on the screen:
humboldt:/usr/local/R-patched # make pdf
make[1]: Entering directory `/usr/local/R-patched/doc'
make[2]: Entering
2008 Dec 29
1
kvoptions.sty
On an new install of Ubuntu 8.10 64bit, I am having trouble with make
check-all checking package 'survival' and elsewhere:
l.100 \fontencoding\encodingdefault\selectfont
! LaTeX Error: File `kvoptions.sty' not found.
Type X to quit or <RETURN> to proceed,
or enter new name. (Default extension: sty)
! Emergency stop.
<read *>
l.2231
2008 Oct 28
1
Sweave Error
dear R users,
I am using sweave to generate report for my data analysis.
I recently updated R ro 2.8.0, and now I have the following results when compile the the tex file generated from R.
This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6)
%&-line parsing enabled.
entering extended mode
(./Lajos.tex
LaTeX2e <2005/12/01>
Babel <v3.8h> and hyphenation patterns for english,
2020 Feb 14
3
R-3.6.2 make check fails
I am trying to build the latest version of R (3.6.2) on a CentOS system running 7.7.1908.
I have been able to build previous versions of R up to and including 3.5.3 successfully. Starting with 3.6.0
the "make check" step fails with errors relating to "pdflatex" being missing. So, I installed texlive-latex
(and the 100 other rpm dependencies) then tried rebuilding R.
2012 Apr 18
3
Installing texlive dependencies
Hello ALL!
I am running Fedora 16 x86_64. Due to some dubious problems, that i
couldn't resolve, with the TeXLive (2007, which is a default), I removed
it. That removed R as well, and some other dependent packages. Then, I
installed TeXLive 2011 from CTAN. However, when I wanted to install R,
from Fedora's repositories, it asks for some TeX dependencies (for
example, tex-preview,