similar to: building r-devel

Trying to install latest rjags (3-5) from CRAN with JAGS 3.2.0 installed on Ubuntu 10.04, with r-devel ... the bottom line is that it fails while loading with /libs/rjags.so: undefined symbol: _ZN7Console15checkAdaptationERb Has anyone else seen this or is it a glitch somewhere in my system? thanks Ben Bolker ================== bolker at ubuntu-10-new:~/R/pkgs/rjags$ jags Welcome to

I am trying to do VPATH builds of R3.1.3, i.e. binaries built outside the source directory. It works just fine on Linux but on Mac OSX (Mavericks) I get the following trace from make, after a successful configure step. Any insights gratefully received. make is GNU make 3.81 on both systems. bash-3.2$ make make make[1]: Nothing to be done for `R'. make[1]: Nothing to be done for `R'.

From SVN revision 57032, with configuration R is now configured for i686-pc-linux-gnu Source directory: . Installation directory: /usr/local C compiler: gcc -std=gnu99 -g -O2 Fortran 77 compiler: gfortran -g -O2 C++ compiler: g++ -g -O2 Fortran 90/95 compiler: gfortran -g -O2 Obj-C compiler: Interfaces supported: X11

Hi all, A list of some possible issues: 1. In R 2.11.x, in: http://svn.r-project.org/R/branches/R-2-11-branch/share/texmf/ there are two files, jss.cls and jss.bst (for JSS), which appear to be new since 2.10.x. These files are not installed when building/installing R. It would appear that they are not included in: https://svn.r-project.org/R/branches/R-2-11-branch/share/Makefile.in The

I wouldn't be at all surprised if I turned out to be doing something boneheaded, but I've *tried* to follow all the relevant rules ... Based on a clean SVN checkout of R-devel r61617, building in a separate directory, I end up with Error in eval(expr, envir, enclos) : object '.print.via.format' not found Has anyone encountered this or does anyone have any further

Dear all, I was hoping someone may know a way of running texi2dvi while ignoring bibtex errors, or any other work around (such as not running bibtex at all, if possible). The context is that I have an R program that does some calculations and writes a table into various folders, one per country for several countries. I have a latex file that takes the table as an input, and this latex file is

I have two versions of a bibtex database which have gotten badly out of sync. I need to find find all the entries in bib2 which are not contained in bib1, according to their bibtex keys. But I can't figure out how to extract a list of the bibentry keys in these databases. A minor question: Is there someway to prevent read.bib from ignoring entries that do not contain all required fields?

I want up-to-dateish versions of TexLive, R, gnumeric, emacs, but on a more-or-less stable base of Centos-5.2. I asked for packages in this, but got no answers. So now I've built them and will let you try them if you want. I used the source packages from Fedora 8 and 9. I wanted TexLive because many of us have jumped ship to Ubuntu Linux 8.04 and it does offer TexLive, and the compatability

With a recent SVN build (R Under development (unstable) (2013-07-10 r63264) -- "Unsuffered Consequences"), I'm having trouble installing the robustbase package. The bottom line is that I *think* it's a 32-bit-system problem, but I could easily be mistaken. robustbase is passing its package checks: http://cran.r-project.org/web/checks/check_results_robustbase.html ... but from

Try this: fn <- "tmp.dat" x <- 1:3 dump("x",file=fn) file.info(fn) ## 9 bytes file.copy(paste("./",fn,sep=""),fn,overwrite=TRUE) file.info(fn) ## 0 bytes (!!) Normally file.copy() checks and disallows overwriting a file with itself, but it only checks whether character string 'from' is the same as character string 'to'

Dear list, I am trying to produce a pdf manual using Rtools (version 3.1.0.1936) on Windows 8 (64-bit). I am also aware of the inconsolata issue posted in the forum (https://stat.ethz.ch/pipermail/r-devel/2013-June/066850.html), and then I have installed the patched version of R-3.0.1. However I still have some errors with the following message: R CMD Rd2pdf mypack Hmm ... looks like a package

I'd like to modify pthread library ( e.g. manipulating some functions ) in glibc, so I want to compile and install modified glibc. However, I failed to compile glibc and need some help. How can I fix the problem? Here is the process that I've tried. 1. download glibc-2.3.4.tar.tar from http://ftp.gnu.org/gnu/glibc/ 2. unzip glibc-2.3.4.tar.tar 3. make build-folder [root at localhost /]#

On 05/29/2018 04:53 PM, Dirk Eddelbuettel wrote: > I noticed it with a local, not-public package -- but it appears to apply with > any source package. I replicated with pkgKitten straight off CRAN and after > checking that it has a six page manual there. I'm having trouble reproducing this one. In my fresh CentOS 7 VM, I can pull the pkgKitten source down, and run R CMD Rd2pdf

Tom, On 30 May 2018 at 11:34, Tom Callaway wrote: | On 05/29/2018 04:53 PM, Dirk Eddelbuettel wrote: | > I noticed it with a local, not-public package -- but it appears to apply with | > any source package. I replicated with pkgKitten straight off CRAN and after | > checking that it has a six page manual there. | | I'm having trouble reproducing this one. In my fresh CentOS 7 VM, I

I am new to R, Sweave, and LaTeX. I am running StatET with Eclipse 3.7 on a Windows 7 x64 OS. StatET also includes the Sweave add-on, which I use to try and compile a PDF document. I also installed MiKTeX 2.9, because, previously, R could not execute texi2dvi (presumably, because there was no TeX runner). Basically, no .tex file could be compiled into PDF file. After I installed MiKTeX, I was

I am installing SPLASH(http://www-flash.stanford.edu/SPLASH/) benchmark codes on CentOS 4.6. And there is compile error during make.. Here is the error messages. Does it come from the gcc library? Should I update the gcc or other library? [root at localhost barnes]# make BARNES make: Warning: File `code.C' has modification time 6e+02 s in the future m4 -s -Ulen -Uindex

R Community, I often am in need of viewing the reference manuals of packages and do not have Internet access. I have used the code: path <- find.package('tm') system(paste(shQuote(file.path(R.home("bin"), "R")),"CMD", "Rd2pdf",shQuote(path))) someone kindly provided from this help list to generate the manuals from the latex files. This

Hello, I'm seeing three different vignette-related errors with recent versions of R-3.0.0 alpha. First, with the package BitSeq (http://bioconductor.org/packages/2.12/bioc/html/BitSeq.html), I get the following when trying to build the package: Error: processing vignette ?BitSeq.Rnw' failed with diagnostics: Failed to locate the ?weave? output file (by engine ?utils::Sweave?) for

Hi All, I am running Ubuntu Feisty (7.04) on a Thinkpad T41. I've installed the nowebm package for Ubuntu. Working from this HowTo: http://www.ci.tuwien.ac.at/~leisch/Sweave/example-1.Snw I try to compile the example *.Snw as in the Sweave manual: mdj at lapmdj:~/Desktop/Sweave/example1$ noweb example-1.Snw Can't open output file Despite the error, a *.tex file is produced. Now I am

Hi! Just wondering if anyone has this working ... Centos-7 guest in VMware-10 host (on Windows-7 :-( ) Out of the box, shared folders and drag&drop do not work although X screen resolution sensing is fine (ie xrandr reports the resolution of the host screen as well as the peculiar screen options built-in) and I can Alt-Enter to full screen quite happily. I tried Fedora-22 too but did