similar to: debug vs regular mode

Hi all, I'm trying to download a file from the net, and the download.file command leaves it corrupted, i.e excel cannot open it. It seems as if it's going ok, however. Does anyone have an idea of what's going on? regards, Gustaf Rydevik ---- >download.file(url="http://www.who.int/entity/whosis/whostat2006_demographics.xls",destfile="whodem.xls") trying URL

Dear List, I'm using glmulti for model averaging in R. There are ~10 variables in my model, making exhaustive screening impractical - I therefore need to use the genetic algorithm (GA) (call: method = "g"). I need to include random effects so I'm using glmulti as a wrapper for lme4. Methods for doing this are available here

Hi, I would like to know how can I keep adding data to a file while doing a loop and without deleting the data of the previous iteration. Thanks.

Dear R, The glmulti package no longer loads through the library() command, apparently because of a problem with rJava. I have today reinstalled R from scratch (updated to v2.14.0) and reinstalled all packages from scratch and updated them all too. The problem is the same as I found on v2.13.2. See session below for the error. I tried install.packages(rJava) as advised by the error report but it

Full_Name: Gustaf Rydevik Version: 2.7.1 OS: Win XP professional Submission from: (NULL) (130.237.97.254) The following lines of code crash R 2.7.1 (=cause R to show "The R gui has encountered a problem and needs to close"....). Replicated on two WinXp professional machines, as well as by Uwe Ligges. > sessionInfo() R version 2.7.1 (2008-06-23) i386-pc-mingw32 locale:

Hi, The added support for semi-transparent colours in `windows' under R-2.6.0 for Windows is much appreciated. However, I've discovered that issuing a `layout' (or `par' with arguments `mfcol'/`mfrow') call and then trying to plot several figures with semi-transparent colour on the same page results in only the first one being fully drawn. E.g. > x <-

Dear all, I am using the R package SNPRelate but I found an error when I run the following command. Do you know what might be the problem? Thanks in advance. > vcf.fn <- system.file("extdata", "sequence.vcf", package="SNPRelate") > snpgdsVCF2GDS(vcf.fn, "test.gds") Start snpgdsVCF2GDS ... Open

Hello, I'm using the "glmulti" package to run models of all the possible combinations of my variables. However, I am only interested in a few interactions between my variables. I have tried the equivalent of: mod1<-lm(y~a+b+c+a:b) glmulti(mod1, level=1) mod2<-lm(y~a+b+c+a:b) glmulti(mod2, level=2) and glmulti("y", c("a", "b", "c"),

Dear all, I have a question about the glmulti package. I want to include some variables in all models. To that end I applied the wrapper function as shown in the examples (http://www.inside-r.org/packages/cran/glmulti/docs/glmulti). To include the variable "Geslacht" in all models: > glm.redefined = function(formula, data, always="", ...)

It seems within the last ~3 months Ive been having issues with writing text or csv files from a R data frame.  The problem is multifold and it is hard to filter  out what is going on and where the problem is.  So, Im hoping someone else has come across this and may provide insight.   My current settings for R: R version 2.15.2 (2012-10-26) Platform: x86_64-w64-mingw32/x64 (64-bit) locale: [1]

Hi all, I am having some problems in updating some packages from source. I start with : install.packages("Boom",lib="C:/RownLib",type="source") I get the following error message : * installing *source* package 'Boom' ... ** package 'Boom' successfully unpacked and MD5 sums checked ** libs *** arch - i386 c:/Rtools/mingw_32/bin/g++ -std=gnu++11

Hi, I am working on a regression tree in Rpart that uses a continuous response variable that is ordered. I read a previous response by Pfr. Ripley to a inquiry regarding the ability of rpart to handle ordinal responses in 2003. At that time rpart was unable to implement an algorithm to handle ordinal responses. Has there been any effort to rectify this in recent years? Thanks! Stacey On

Hi, As far as I can see, no. On checking, I have confirmed that the only location of cygwin1.dll is : C:\Rtools\bin Thanks Vivek 2017-06-03 12:57 GMT+02:00 Duncan Murdoch <murdoch.duncan at gmail.com>: > On 03/06/2017 6:31 AM, Vivek Sutradhara wrote: > >> Hi all, >> I am having some problems in updating some packages from source. I start >> with : >>

I'm running r 2. on a mac running 10.6.4 and a dual-core macbook pro. I'm having a funny time with multicore. When I run it with 2 cores, mclapply, R borks with the following error. The process has forked and you cannot use this CoreFoundation functionality safely. You MUST exec(). Break on __THE_PROCESS_HAS_FORKED_AND_YOU_CANNOT_USE_THIS_COREFOUNDATION_FUNCTIONALITY___YOU_MUST_EXEC__()

All, I am working on a multiple-regression meta-analysis and have too many alternative models to fit by hand. I am using the "metafor" package in R, which generates AIC scores among other metrics. I'm using a simple formula to define these models. For example, rma(Effect_size,variance, mods=~Myco_type + N.type +total, method="ML")->mod where Effect_size is the

Dear List, I am using both the clm() and clmm() functions from the R package 'ordinal'. I am fitting an ordinal dependent variable with 5 categories to 9 continuous predictors, all of which have been normalised (mean subtracted then divided by standard deviation), using a probit link function. From this global model I am generating a confidence set of 200 models using clm() and the

On R 2.15.2 and ArcGIS 9.3.1, it works for me in ArcCatalog but you have to follow the particulars here: http://webhelp.esri.com/arcgisdesktop/9.3/index.cfm?TopicName=Accessing_delimited_text_file_data For example: write.table(test, '***.tab', sep = '\t', row.names = F) The extension .tab and sep = '\t' are required for text files. Didn't test row.names=T but I

Hola. En mi caso, no he podido resolver los problemas con el Java para usar XLConnect, que en los papeles me parece el mejor. Supongo que algo de la arquitectura del sistema o bien de la relación entre el Java, el R y el RStudio. Así que utilizo library(openxlsx) write.xlsx(datos, file = "EDA1.xlsx") #donde datos es el objeto que quiero guardar. Requiere instalar el RTools, según tipo y

On 03/06/2017 6:31 AM, Vivek Sutradhara wrote: > Hi all, > I am having some problems in updating some packages from source. I start > with : > install.packages("Boom",lib="C:/RownLib",type="source") > > I get the following error message : Do you have multiple copies of cygwin1.dll? Duncan Murdoch > > * installing *source* package

Dear all, thank you for your hints. I would prefer to do not use Rserve as Dirk mentioned. @Simon I have full control over the Java implementation - I can adapt the code that I use for the communication R <-> Java. > You can natively access structures on each side. The fastest way is to > use R representation (column-oriented) in Java - that is much faster > than any kind of