similar to: any recommendation for software about prediction analysis of gene expression data

Dear R users, I'm wondering how I can generate an arbitrary number of loops in R. For instance, I can generate two "for" loops to get ICC among any two-way combination among 10 variables. Here is the code n<-10 for (i in 1:(n-1)) { for (j in (i+1):n) { icc(cbind(DATA[,i],DATA[,j])) } } If I need three-way combination, then a code with three "for" loops will be:

Dear R users, I'm wondering how I can generate an arbitrary number of loops in R. For instance, I can generate two "for" loops to get ICC among any two-way combination among 10 variables. Here is the code n<-10 for (i in 1:(n-1)) { for (j in (i+1):n) { icc(cbind(DATA[,i],DATA[,j])) } } If I need three-way combination, then a code with three "for" loops will be:

Hi sbr-services, Could you give me some idea? ### abrt reported the error as below. [root at cupop4 log]# abrt-cli list --since 1488267244 id ad716dbfd3a68bbe0f055e32ebfe562f4f75df43 reason: imap killed by SIGBUS time: Sun Mar 19 2017 10:58:27 AM JST cmdline: dovecot/imap package: dovecot-2.2.10-7.el7 uid: 80180 (acaa2325) count: 2 Directory:

I have 2 DCs running 4.1.12 that have stopped replicating and are producing these error messages: from dc1: Failed to commit objects: WERR_GENERAL_FAILURE/NT_STATUS_INVALID_NETWORK_RESPONSE [2014/09/23 10:43:35.530000, 0] ../source4/rpc_server/drsuapi/getncchanges.c:1646(dcesrv_drsuapi_DsGetNCChanges) ../source4/rpc_server/drsuapi/getncchanges.c:1646: DsGetNCChanges 2nd replication on

Dear R users, When I run the code below, I get the error "Error in integrate(integrand, 0, Inf) : non-finite function value". The code works if the function returns only "sum(integ)". However, I want to add "cmh" to it. When I add "cmh" I get that error. I can't figure out why this is happening because my integrate function has nothing to do with

In SAS, for a two-way (or 3-way, stratified) table, the CMH option in SAS PROC FREQ gives 3 tests that take ordinality of the factors into account, for both variables, just the column variable or neither. Is there an equivalent in R? The mantelhaen.test in stats gives something quite different (a test of conditional independence for *nominal* factors in a 3-way table). e.g. I'd like to

I am reading dates in Excel2007 into R. Here are the functions I used: library(RODBC) channel<-odbcConnectExcel2007("myfile.xlsx") tmp<-sqlFetch(channel,"1",as.is=T) The dates in myfile.xlsx are all in this format: mm/dd/yyyy. But when I read it to R, some columns look like "yyyy-mm-dd 00:00:00", some columns look like "yyyy-mm-dd", and some

Dear all, I always encounter a crash when running hazard.ratio.plot from rms package with my predictor as a factor. It works fine when the predictor is a continous score. Anyone encounters this too? Is this a bug or something? Thanks, Lilian [[alternative HTML version deleted]]

I know that this maybe a trivial question. I am not able to plot pedices in graph axes. Instead I am able to plot different math symbols : XLABEL <- expression(paste(cmH,lim(f(x), x %->% 0),"O PEEP")) works well XLABEL <- expression(paste(cmH,[2],"O PEEP")) is considered a wrong expression. Thanks

On Fri, 26 Aug 2016, Peter Griffin wrote: > This patch adds the DT nodes for the uniperif player > IP blocks found on STiH407 family silicon. > > Signed-off-by: Arnaud Pouliquen <arnaud.pouliquen at st.com> > Signed-off-by: Peter Griffin <peter.griffin at linaro.org> > --- > arch/arm/boot/dts/stih407-family.dtsi | 76 +++++++++++++++++++++++++++++++++++ > 1

On Fri, 26 Aug 2016, Peter Griffin wrote: > This patch adds the DT nodes for the uniperif player > IP blocks found on STiH407 family silicon. > > Signed-off-by: Arnaud Pouliquen <arnaud.pouliquen at st.com> > Signed-off-by: Peter Griffin <peter.griffin at linaro.org> > --- > arch/arm/boot/dts/stih407-family.dtsi | 76 +++++++++++++++++++++++++++++++++++ > 1

Hi, We got a huge problem on our sun grid engine cluster with glusterfs 3.3.0. Could somebody help me? Based on my understanding, if a folder is removed and recreated on other client node, a program that tries to create a new file under the folder fails very often. We partially fixed this problem by "ls" the folder before doing anything in our command, however, Sun Grid Engine

Hi, everyone I've been trying to make a scatter plot of POSIXct format data to see the difference between two start time. Like X: [1] "1995-05-26 19:00:00" "1995-05-27 01:00:00" "1995-05-27 07:00:00" [4] "1995-06-29 01:00:00" "1995-06-29 07:00:00" "1995-06-30 13:00:00" [7] "1995-06-30 19:00:00" "1995-07-01

hi all, I'm working on scrapping some website data to build a database. Under most cases, I can use package XML to get the dataset. However, some of the website doesn't give a explicit address of the downloaded tables. To be more specific, for example, I'm interested in the website http://ets.aeso.ca/ The data we are scraping is the "Pool Weekly Summary" under the

On Fri, 26 Aug 2016, Peter Griffin wrote: > This patch adds the DT node for the uniperif reader > IP block found on STiH407 family silicon. > > Signed-off-by: Arnaud Pouliquen <arnaud.pouliquen at st.com> > Signed-off-by: Peter Griffin <peter.griffin at linaro.org> > --- > arch/arm/boot/dts/stih407-family.dtsi | 26 ++++++++++++++++++++++++++ > 1 file

On Fri, 26 Aug 2016, Peter Griffin wrote: > This patch adds the DT node for the uniperif reader > IP block found on STiH407 family silicon. > > Signed-off-by: Arnaud Pouliquen <arnaud.pouliquen at st.com> > Signed-off-by: Peter Griffin <peter.griffin at linaro.org> > --- > arch/arm/boot/dts/stih407-family.dtsi | 26 ++++++++++++++++++++++++++ > 1 file

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Hello, I've tried to analyze some data with a CMH test. My 3 dimensional contingency tables are 2x2xN where N is usually between 10 and 100. The problem is that there may be 2 strata with opposite counts (the 2x2 contigency table for these are reversed), producing opposite odds ratios that cancle out in the overall statistics. These opposite counts are very important for my analysis, since

Hi, I want to use Princomp function in R, but com up an error as " Error: couldn't find function "princomp" ", can you help me resolve this problem? Thanks, Jixin Dai, Ph.D

Hi Vinod, Bjorn, Patrice, This patchset adds support for the Flexible Direct Memory Access (FDMA) core found on STi chipsets from STMicroelectronics. The FDMA is a slim core CPU with a dedicated firmware. It is a general purpose DMA controller supporting 16 independent channels and data can be moved from memory to memory or between memory and paced latency critical real time targets. After quite