Displaying 20 results from an estimated 600 matches similar to: "R CMD build --resave-data"
2008 Aug 20
3
Dovecot & (Al)pine - resaving messages to Inbox
I have a x86 Linux box running Fedora 4. Up until 2008 I was using pine 4.64 and Dovecot 0.99.x. In early 2008 I transitioned to Alpine 1.10, and didn't notice any major changes.
I upgraded to Dovecot 1.0.15 this past weekend. My dovecot -n settings are at the bottom of the email.
I've noticed a change since Dovecot was upgraded. I used to reorder items within my INBOX in al/pine by
2010 Aug 31
1
Q about package Icens: change the color of the shading in plot function
Hello!
I want to use the Icens package for analyzing interval-censored data. This code from the manual gives me what I want.
library(Icens)
data(cosmesis)
csub1 <- subset(cosmesis, subset=Trt==0, select=c(L,R))
e1 <- VEM(csub1)
plot(e1)
However, I would like to change the color of the shading from green to something less green, say gray. Any ideas how I could do that? I looked at par, but
2012 Mar 29
3
r-forge build failure bafflement
I am attempting to build a package on r-forge and running into a
weird error. I have been in correspondence with the R-forge admins
and am turning to r-devel on the remote chance that someone might have
a guess as to what is going wrong or a suggestion about further
diagnostics/experiments I could try ...
The package seems to build fine on my system(s) with
R CMD build --compact-vignettes
2003 Aug 13
4
running wordpad.exe (from win2000) in wine error
Hi All,
I installed wine in my redhat linux-8.0
machine using wine-20030709-1rh8winehq.i686.rpm
and copied wordpad.exe and mfc42u.dll from my win2000
machine to the ~home/.wine/c/windows and system
directories and try to run wordpad.exe in wine byr
#wine wordpad.exe
I am getting error message dialog as
The application or DLL can not be loaded on
windows95 or 3.1. It takes advantage
2012 Aug 16
1
Compressing data for package builds
Hi,
I have two .rda files that I need to include in a package. I've placed
them both in a data directory
after save() the are around 150Kb each.
When I try to check the package I get the following warning
Warning: large data file(s) saved inefficiently:
size ASCII compress
zagoskin.rda 137Kb FALSE none
Note: significantly better compression could be obtained
2008 Apr 24
1
truncate row names
Hi,
I would like to truncate row names. Is that possible?
I ran a regression with the covariates in a matrix, and in the results the
coefficients have the matrix name concatenated with the variable name:
> full.t.ag <- Icens(lfirst_well, llast_well, lfirst_ill, formula=~ t.ag.X,
breaks=t.ag.int, data=t.ag)
> full.t.ag$cov$coeff
t.ag.Xnyearc t.ag.Xhorse t.ag.Xswine
2018 Jun 18
1
Automatic Compression by Save Causes Check Warning
Good day,
Save sometimes chooses a compression method which causes a warning during package checking. An example of this is:
measurements <- matrix(round(rnorm(2000*190), 2), nrow = 2000, ncol = 190)
classes <- factor(sample(LETTERS[1:2], 190, replace = TRUE))
save(measurements, classes, file = "data/experiment.RData")
then, when the package is checked,
* checking data for
2011 Dec 06
1
warning for inefficiently compressed datasets
Hi,
Recently added to doc/NEWS.Rd:
'R CMD check' now gives a warning rather than a note if it finds
inefficiently compressed datasets. With 'bzip2' and 'xz' compression
having been available since R 2.10.0, there is no excuse for not
using them.
Why isn't a note enough for this?
Generally speaking, warnings are for things that are dangerous,
or unsafe,
2009 Feb 24
2
receiving 1st digit from a variable
Hi people!
I want to save the 1st letter from the ${EXTEN} variable. I don't want
to trim it, I want to RESAVE it into a new variable.
Let us assume the ${EXTEN} contains: 0698332977 then I'd love to get the 0
I would thank you for all advises.
Tamer
2013 Oct 11
3
matrix values linked to vector index
Hi,
In the example you showed:
m1<- matrix(0,length(vec),max(vec))
1*!upper.tri(m1)
#or
?m1[!upper.tri(m1)] <-? rep(rep(1,length(vec)),vec)
#But, in a case like below, perhaps:
vec1<- c(3,4,5)
?m2<- matrix(0,length(vec1),max(vec1))
?indx <- cbind(rep(seq_along(vec1),vec1),unlist(tapply(vec1,list(vec1),FUN=seq),use.names=FALSE))
m2[indx]<- 1
?m2
#???? [,1] [,2] [,3] [,4] [,5]
2019 Sep 27
1
passing extra arguments to devtools::build
This question was posed on SO :
https://stackoverflow.com/questions/58118495/passing-extra-argumenets-to-devtoolsbuild
but there has been no useful reply.
Something seems to have changed in the |devtools|package, so that the
following commands, that used to run now give an error I can't decipher:
|>Sys.setenv(R_GSCMD="C:/Program
2005 Dec 31
4
saving a collection
Reading the Agile book, I can''t find a single command to save a collection.
The save command seems to operate on only individual objects.
Lets say I have a collection that I have received from a find_all command.
I want to go through and change some attributes in various objects in the
collection. Then I want to resave the whole collection back to the
database. I don''t think
2006 Mar 31
0
help in using Icens package to estimate NPMLE for interval censored data
Dear all, I want to compute the NPMLE for interval censored data using the
EMICM function in Icens package, but I didn't find much detailed
instructions on how to use this. I couldn't even figure out how to specify
the status of right censored, interval censored, observed. (probably due to
my level of understanding.) Does anyone have experience on using this and
could you please help me?
2008 Jun 04
8
Not running correct specs under autotest:
I know this isn''t autotest-users but I''m not sure where else to bring this up:
[["app/controllers/contents_controller.rb", Wed Jun 04 14:11:03 +0100 2008]]
[["app/controllers/contents_controller.rb", Wed Jun 04 14:11:03 +0100 2008]]
/System/Library/Frameworks/Ruby.framework/Versions/1.8/usr/bin/ruby -S
script/spec -O spec/spec.opts spec/models/user_spec.rb
2013 Apr 12
2
"Failed to locate the 'texi2pdf' output file"
Hi,
Every day a few Bioconductor packages (different ones each day) fail
to build, on Windows only, with an error like this:
D:\biocbld\bbs-2.13-bioc\meat>D:\biocbld\bbs-2.13-bioc\R\bin\R.exe CMD
build --keep-empty-dirs --no-resave-data OrganismDbi
[...]
Error in find_vignette_product(name, by = "texi2pdf", engine = engine) :
Failed to locate the 'texi2pdf' output file (by
2016 Jul 12
3
Forking and adapting an R package
Hello.
I'm trying to adapt the package ?hexbin? to suit my needs. This is the first
time I do this. I've read a bit through Hadley's ?R packages?, but now I'm
pretty lost (from a workflow point of view). I am using RStudio and Hadley's
devtools.
So I forked the repo I want to adapt: https://github.com/grssnbchr/hexbin and
cloned it using RStudio (I created a new project).
2016 Jul 12
3
Forking and adapting an R package
Hello.
I'm trying to adapt the package ?hexbin? to suit my needs. This is the first
time I do this. I've read a bit through Hadley's ?R packages?, but now I'm
pretty lost (from a workflow point of view). I am using RStudio and Hadley's
devtools.
So I forked the repo I want to adapt: https://github.com/grssnbchr/hexbin and
cloned it using RStudio (I created a new project).
2014 Dec 09
2
UTF8 markdown vignette
Dear all,
I'm trying to use a Markdown vignette with UTF-8 encoding. It compiles well when knitting the vignette in RStudio, but it fails to recognize the UTF-8 settings when building the source package. Can someone point out what I'm doing wrong? I tried to put the relevant information below.
Best regards,
Thierry
Details:
Using 64-bit R 3.1.2 with encoding = "native.enc"
2012 Jan 24
1
Failure to get compactPDF to compact a pdf file
I am failing to get compactPDF to make any change to a pdf file
that, a/c to the message from the CRAN upload site, can be very
substantially compacted. Any ideas what may be wrong?
I have also tried recreating the pdf file. I also tried
R CMD build --resave-data --compact-vignettes DAAG
The data files compact alright (but I get the 'significantly better compression'
warning message
2006 Oct 31
3
Forcing FCGI at dreamhost
Greetings all,
I''ve got an app in production at dreamhost, but I can''t seem to force
FCGI on it. I have it enabled for the domain in the admin panel, have
checked the file permissions in my public folder, and tried firing the
scripts from the command line.
When firing either dispatch.cgi, or dispatch.fcgi from the command line,
I get a 500 internal server error on BOTH.