similar to: Problem installing RCurl

Hi list, I tried to install MCMCpack to R-2.12.0, got the following error, CC -m64 -library=stlport4 -I/apps/sparcv9/R-2.12.0/lib/R/include -DSCYTHE_COMPILE_DIRECT -DSCYTHE_DEBUG=0 -DHAVE_TRUNC -DHAVE_IEEEFP_H -I/opt/csw/include -KPIC -g -c MCMCSVDreg.cc -o MCMCSVDreg.o "error.h", line 598: Error: The function "abort" must have a prototype.

Hi, for checking purposes, I setup a multiple sub-architecture R installation following this post from Simon Urbanek: https://stat.ethz.ch/pipermail/r-devel/2011-August/061755.html It all went fine. The only change I made to Simon's procedure was to install with: make prefix=~/bin/R/2.15 install instead of sudo make install rhome=/usr/local/R/2.15. I am now trying to install RCurl in

Hi, I'm struggling to install RCurl for 32-bit linux and am hoping for some suggestions. I obtained RCurl_1.3-1.tar.gz from CRAN today, and am using a very recent version of R: R version 2.10.1 Patched (2010-01-12 r50970). I'm not the sysadmin for this system (disclaimer: my sysadmin skills are not very good, I'm afraid). curl is available centrally on the system but

Confirmed that gcc-gfortran is installed Package gcc-gfortran-4.4.7-16.el6.x86_64 already installed and latest version What could I check next? I do not have the following installed and will get that done and tested again. libcurl-devel libidn-devel Thanks, Larry -----Original Message----- From: Tom Callaway [mailto:tcallawa at redhat.com] Sent: Wednesday, January 27, 2016

Looks to have libgfortran installed. yum list installed | grep libgfortran libgfortran.x86_64 4.4.7-16.el6 @rhel-x86_64-server-6 What else could I check? Installed libcurl-devel and libidn-devel. yum list installed | grep libcurl libcurl.x86_64 7.19.7-46.el6 @rhel-x86_64-server-6 libcurl-devel.x86_64

dear list, i'm trying to install the package RCurl into a linux system running SUSE Linux Enterprise Server 10 SP2 but i get compilation errors which i guess should be due to some missing additional software. i've been searching about the R-help archives without success so i hope somebody can point me out to this missing piece. in principle, i have the necessary curl software installed:

Hello all, I had both curl and curl-devel (both 7.15) installed on my x86_64/CentOS machine. However, I still got problem when I do R CMD INSTALL RCurl   Error message below, since library and/or include path is missing. I tried R CMD INSTALL RCurl --configure-args='--libdir=/usr/lib64/  --includedir=/usr/include/' Same result. Any hint/suggestion would be appreciated. ... No

http://dovecot.org/releases/2.0/dovecot-2.0.0.tar.gz http://dovecot.org/releases/2.0/dovecot-2.0.0.tar.gz.sig As promised last Friday, here's the v2.0.0 release finally. I'm cautiously optimistic that v2.0.1 won't (have to) be released for a few weeks, since there was quite a lot of testing and fixing going on in the RC stage. Remember to read http://wiki2.dovecot.org/Upgrading/2.0

http://dovecot.org/releases/2.0/dovecot-2.0.0.tar.gz http://dovecot.org/releases/2.0/dovecot-2.0.0.tar.gz.sig As promised last Friday, here's the v2.0.0 release finally. I'm cautiously optimistic that v2.0.1 won't (have to) be released for a few weeks, since there was quite a lot of testing and fixing going on in the RC stage. Remember to read http://wiki2.dovecot.org/Upgrading/2.0

I am trying to compile R on Linux using SunStudio. Configure flags are mostly as suggested in the R install guide. CC=/opt/sun/sunstudio12.1/bin/suncc CFLAGS="-g -xc99 -xlibmil -xlibmieee" MAIN_CFLAGS=-g SHLIB_CFLAGS=-g CPPFLAGS="-I. -I/opt/sun/sunstudio12.1/prod/include -I/opt/sun/sunstudio12.1/prod/include/cc" CPPFLAGS+="-I/opt/sun/sunstudio12.1/prod/include/cc/sys

Hi, I attempted to build v3.3 using Sun Studio 12, but it failed right out of the gate. It looks like it can't find the standard libraries, but according to the make output, it's looking in the right places. Would someone please clue me in as to what I'm missing? Thanks. -John Using FLAGS = -I/opt/heimdal/include -I/usr/sfw/include/openssl -g -xs -xtarget=ultraT1

Thank you Martyn, I am one step closer. Using R-patched, configure was successful. However, make exited with an error. Configure summary: Installation directory: /usr/local C compiler: /opt/sun/sunstudio12.1/bin/suncc -g -O -xc99 -xlibmil -m32 -xlibmieee -nofstore Fortran 77 compiler: /opt/sun/sunstudio12.1/bin/sunf95 -g -O -libmil -m32 -nofstore C++ compiler:

Apologies if this is not the best list on which to ask for help. I have compiled R 2.6.0 using Sun Studio 12 compilers. I can install most CRAN and bioconductor packages that I need, with the exception of RSQLite. Unfortunately this is critical for other packages that I need. I have tried to compile it using R CMD INSTALL to generate a config.log file. I don't know how to fix the reported

Dear list members, I encountered this problem and the solution pointed out in a previous thread did not work for me. (e.g. install.packages("RCurl", repos = "http://www.omegahat.org/R") I work with Ubuntu Hardy, and installed R 2.6.2 via apt-get. I really need RCurl in order to use biomaRt ... any help would be greatly appreciated. Best wishes, Emmanuel

Martin, Well, thanks for jumping in! We need all the help we can get ;) I changed the execute bit as you suggested and recompiled, no luck, still the same error message. Below is the output you wanted me to look at, its a bit beyond me so I include both a brief grep summary and then the whole enchilada. I do note that my output is different from yours, but I'm not sure how to interpret. I

Martin, Well, thanks for jumping in! We need all the help we can get ;) I changed the execute bit as you suggested and recompiled, no luck, still the same error message. Below is the output you wanted me to look at, its a bit beyond me so I include both a brief grep summary and then the whole enchilada. I do note that my output is different from yours, but I'm not sure how to interpret. I

I am trying to compile R-2.4.1 in 64-bit on Solaris 10 running on AMD hardware. I am trying to do this with Sun Studio 11. My config.site looks like this: #! /bin/sh AR="/usr/ccs/bin/ar" TEX="/usr/local/teTeX/bin/i386-pc-solaris2.10/tex" LATEX="/usr/local/teTeX/bin/i386-pc-solaris2.10/latex" PDFTEX="/usr/local/teTeX/bin/i386-pc-solaris2.10/pdftex"

I am trying to compile R-2.4.1 in 64-bit on Solaris 10 running on AMD hardware. I am trying to do this with Sun Studio 11. My config.site looks like this: #! /bin/sh AR="/usr/ccs/bin/ar" TEX="/usr/local/teTeX/bin/i386-pc-solaris2.10/tex" LATEX="/usr/local/teTeX/bin/i386-pc-solaris2.10/latex" PDFTEX="/usr/local/teTeX/bin/i386-pc-solaris2.10/pdftex"

Hi, I'm working on a server with a sparcv9 chip using SunOS 5.9 Generic May 2002. The compilers are the Sun Studio 12 compilers. I'm trying to build a 64-bit version of R-2.6.1, and while the configure script runs, the make does not. Here are the options I set in config.site: ________________________________________________________________________ _ R_PAPERSIZE=letter CC="cc

I am trying to compile R-2.4.1 in 64-bit on Solaris 10 running on AMD hardware. I am trying to do this with Sun Studio 11. My config.site looks like this: #! /bin/sh AR="/usr/ccs/bin/ar" TEX="/usr/local/teTeX/bin/i386-pc-solaris2.10/tex" LATEX="/usr/local/teTeX/bin/i386-pc-solaris2.10/latex" PDFTEX="/usr/local/teTeX/bin/i386-pc-solaris2.10/pdftex"