Displaying 20 results from an estimated 2000 matches similar to: "installed.packages Error: subscript out of bounds"
2010 Nov 12
1
installing dependencies: binary vs source
Hi,
Installing from binaries on Windows:
> install.packages("multtest")
Warning: dependency 'Biobase' is not available
trying URL
'http://cran.fhcrc.org/bin/windows/contrib/2.12/multtest_2.6.0.zip'
Content type 'application/zip' length 1645590 bytes (1.6 Mb)
opened URL
downloaded 1.6 Mb
package 'multtest' successfully unpacked
2005 Jun 29
1
sbrier (Brier score) and coxph
Hello
I've decided to try and distill an earlier rather ill focused question to
try and elicit a response. Any help is greatly appreciated. Why does mod.cox
not work with sbrier whilst mod.km does? Can I make it work?
> data(DLBCL)
> DLBCL.surv<-Surv(DLBCL$time,DLBCL$cens)
>
> mod.km<-survfit(DLBCL.surv)
> mod.cox<-survfit(coxph(DLBCL.surv~IPI, data=DLBCL))
>
2010 Oct 11
1
'R CMD build' not cleaning the src/ folder on Windows
Hi,
'R CMD build' (with R 2.12.0 RC) fails to clean the src/ folder
on Windows:
D:\biocbld\bbs-2.7-bioc>ls meat/BUS/src
BUS.cpp BUS.h
D:\biocbld\bbs-2.7-bioc>R\bin\R CMD build meat\BUS
* checking for file 'meat\BUS/DESCRIPTION' ... OK
* preparing 'BUS':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package
2007 May 15
1
read.table() can't read in this table (But Splus can) (PR#9687)
On Mon, 2007-05-14 at 23:41 +0200, vax9000 at gmail.com wrote:
> Full_Name: vax, 9000
> Version: 2.4.0, 2.2.1
> OS: 2.4.0: Mac OS X; 2.2.1: Linux
> Submission from: (NULL) (192.35.79.70)
>
>
> To reproduce this bug, first go to the website "http://llmpp.nih.gov/DLBCL/" and
> download the 14.8M data set "Web Figure 1 Data file". The direct link is
>
2007 Dec 10
2
00LOCK error with site-library
I have identical R.profiles and R_HOME directories set up on both my
local machine and a remote linux cluster. To keep my libraries and R
install separate, I use a site-library on both machines.
The first line of my .Rprofile is:
'.libPaths(new= "~/R_HOME/site-library") #tell R where site-library is'
Until R-2.6.0 this was working fine on both machines, but since I have
been
2002 Jun 21
1
small security-related rsync extension
Included below is a shar archive containing two patches that together:
1) make backup files get their setuid and setgid bits stripped by
default
2) add a "-s" option that allows backup files to continue to have
these privileges
This means that if you update a collection of binaries with rsync, and
one or more of them has a local-root security problem, the backup
file(s) created when
2024 Nov 29
1
Linux desktop setup with authentication against Samba AD DC
On Fri, 29 Nov 2024 20:50:21 +0100
Peter Milesson <miles at atmos.eu> wrote:
>
> On 11/29/24 20:07, Rowland Penny via samba wrote:
> > On Fri, 29 Nov 2024 12:07:45 +0100
> > Peter Milesson via samba <samba at lists.samba.org> wrote:
> >
> >>> Hi Peter, that was actually more than what I was expecting, a very
> >>> detailed tutorial
2015 Jan 28
3
problem giving setting user permissions on specific folder
Hi Rowland:
voyager /data/company # ls -la folder1/
insgesamt 56
drwxrwxr-x+ 1 administrator dom?nen-benutzer 744 26. Sep 12:45 .
drwxr-xr-x 9 root root 4096 25. Sep 23:33 ..
drwxrwxr-x+ 1 user dom?nen-benutzer 200 20. Jan 14:40 folderx
drwxrwxr-x+ 1 user dom?nen-benutzer 288 19. Jan 14:19 folderxt
drwxrwxr-x+ 1 administrator dom?nen-benutzer 20 26. Sep 00:18
2012 Dec 17
2
How to get transparent colors to sum to complete opacity?
Dear List,
I want to use transparency in R to represent downweighting of
observations based on clusters (repeated observations in a dataset).
Some clusters will have identical covariate values in a parameter space
-- in the 2D x,y case, these represent a bunch of semi-tranparent dots
in the same place. I'd like these overlapping dots to be completely
opaque. In other cases, the
2019 Nov 21
11
Samba4 - Printer Drivers install fails
Hi,
I have a question about printer drivers management in Samba4 (Samba
version 4.7.6, Ubuntu 18)
I use MMC to add new drivers to an existing cups printers, and some of
them are simply refused.
I know the samba4/cups server is operationnal as i'm able to add new
printers or drivers to it through MMC.
I guess it's not a permission problem on the server as i perform the
operation as
2015 Jan 28
1
problem giving setting user permissions on specific folder
On 01/28/15 14:04, Rowland Penny wrote:
> On 28/01/15 18:45, Alberto Valdes Gonzalez wrote:
>> Hi Rowland:
>>
>> voyager /data/company # ls -la folder1/
>> insgesamt 56
>> drwxrwxr-x+ 1 administrator dom?nen-benutzer 744 26. Sep 12:45 .
>> drwxr-xr-x 9 root root 4096 25. Sep 23:33 ..
>> drwxrwxr-x+ 1 user dom?nen-benutzer 200
2016 Nov 27
1
point n print driver deployment for canon ip7250
> On Mon, 21 Nov 2016 13:42:57 +0100
> "L.P.H. van Belle via samba" <samba at lists.samba.org> wrote:
>
>> Hi,
>>
>> Yes thats correct.
>> But try the following.
>> Make sure you use the usermapping.
>>
>> username map = /etc/samba/samba_usermapping
>> containing:
>> !root = NTDOM\Administrator NTDOM\administrator
2012 Feb 17
1
ACLs only apply to primary group?
Hi,
I wonder if someone confirm this behaviour or point out my obvious
mistake - gluster mounts via the native (fuse) client don't seem to
work properly with POSIX ACLs, example:
[jim at puppet ~]$ ls -la /mnt/
total 24
drwxr-xr-x 4 root root 4096 Feb 16 16:49 .
dr-xr-xr-x 23 root root 4096 Feb 17 10:32 ..
drwx-----x 3 root root 4096 Feb 15 03:00 arccontent
drwxrwx--x+ 5 root root 4096
2023 Feb 13
1
access "claim types"
Am 10.02.23 um 11:26 schrieb Rowland Penny via samba:
> Hmm, so there is a DC that is having some dns problems and the windows
> admin isn't bothered that this 'may' be replicating to his other DC's ????
seems so
I don't know if he would take that one DC down if I recommend that to him
> Yes, good to keep up to date, but like you, I don't think updating will
2023 Feb 13
1
access "claim types"
On 13/02/2023 10:54, Stefan G. Weichinger via samba wrote:
> Am 10.02.23 um 11:26 schrieb Rowland Penny via samba:
>
>> Hmm, so there is a DC that is having some dns problems and the windows
>> admin isn't bothered that this 'may' be replicating to his other DC's
>> ????
>
> seems so
>
> I don't know if he would take that one DC down if
2004 Oct 04
2
cwRsync- chdir failed, server 2003
I'm having prolems with cwRsync on server 2003. I'm getting pretty much
identical results to this from the archive:
http://lists.samba.org/archive/rsync/2004-April/009187.html, and as far
as I can see the only suggestion there was to check permissions.
I have one further complication too- I'm trying to sync a remote server
on to a vmware virtual disk that I've mounted using the
2018 Jul 24
2
Force set group id on samba domain member
For being honest, in my previous tests this user's (user test1) new files
was created with NIS\audio group as extected; but other user's files (user
amistest) was created with "NIS\domain users" group (in the same "audio"
directory). This lasted a few days.
It looked like
drwxr-sr-x 2 NIS\amistest NIS\audio 4096 Jul 24 08:17 amistestdir
drwxrwsr-x+ 2
2002 Dec 13
2
Problem with absolute symbolic links
I'm trying to synchronize a particularly troublesome directory structure on a SunOS box to a PC. I really want all symbolic links resolved to real files on the PC when everything is done. I can't seem to find any combination of parameters that will accomplish this.
It boils down to two problems.
1. It seems like that even if I exclude a symbolic link that is a directory it is not
2001 Apr 27
3
nls question
I have a question about passing arguments to the function f that nlm
minimizes.
I have no problems if I do this:
x<-seq(0,1,.1)
y<-1.1*x + (1-1.1) + rnorm(length(x),0,.1)
fn<-function(p)
{
yhat<-p*x+(1-p)
sum((y-yhat)^2)
}
out<-nlm(fn,p=1.5,hessian=TRUE)
But I would like to define
fn<-function(x,y,p)
{
yhat<-p*x+(1-p)
sum((y-yhat)^2)
}
so
2009 Aug 17
2
unnecessary braces?
the version 2 parser thinks I have unnecessary braces,
but I can't find any. False positive or am I missing
something? If a false positive, is there any way to
work around the warning?
* checking Rd files against version 2 parser ... WARNING
Warning: ./man/dbetabinom.Rd:32-34: Unnecessary braces at ?{p(x) = %
(C(N,x)*Beta(N-x+theta*(1-p),x+theta*p))/%
Beta(theta*(1-p),theta*p)}?