Displaying 20 results from an estimated 300 matches similar to: "R CMD check Error after R CMD build for R-2.11.0"
2012 Mar 11
1
CRAN (and crantastic) updates this week
CRAN (and crantastic) updates this week
New packages
------------
* EffectStars (1.0)
Maintainer: Unknown
Author(s): Gunther Schauberger
License: GPL-2
http://crantastic.org/packages/EffectStars
The package provides functions to visualize regression models with
categorical response. The effects of the covariates are plotted with
star plots in order to allow for an optical
2000 Mar 08
1
installing package in Windows
Could you help me in getting a package to compile from source in Windows?
I'm running Windows NT 4.0 on a pentium 450 with 128 Mb of Ram. I've got R
1.0.0.
I am developing a package for R which includes a bit of C code. I have things
working in Unix just fine, and now I want to port it to Windows NT.
I've been following the instructions in the R complements to Venables and
2013 Dec 24
0
Fake Conferences CSCI and WORLDCOMP of Hamid Arabnia
Fake Conferences CSCI and WORLDCOMP of Hamid Arabnia
Hamid Arabnia from University of Georgia is well known
for his fake WORLDCOMP conferences
https://sites.google.com/site/dumpconf This website
has an open challenge posted sometime in 2012 and it
also has comments from several well-known researchers
on WORLDCOMP. Hamd Arabnia never responded to these
because his conferences are bogus.
2009 Nov 06
1
Qtl - package - Question
Dear R-Helpers,
I am using qtl package to analyze qtl data from QTL cartographer.
I have the map file and cro file from QTL cartographer. I was trying to
import these two files in R using qtl package.
data=read.cross("qtlcart", ".", "crofile.txt", "mapfile.txt") ### I have
matched the file structure with the one on the website of qtl package - It
matches
2006 Jul 17
1
Getting rid of for loops
Hello R-users!
I have a style question. I know that for loops are somewhat frowned upon in
R, and I was trying to figure out a nice way to do something without using
loops, but figured that i could get it done quickly using them. I am now
looking to see what kind of tricks I can use to make this code a bit more
aesthetically appealing to other R users (and learn something about R along
the
2004 Nov 09
0
Re: QTL interval mapping in outbred populations
On Mon, 8 Nov 2004 ssim at lic.co.nz wrote:
>
> Is there an add-on package in R for QTL interval mapping for outbred
> population, eg. Haley-Knott regression method ?
>
> Stella
I believe Karl Broman's R/QTL (http://biosun01.biostat.jhsph.edu/~kbroman/software/)
and Brian Yandell's bim (http://www.stat.wisc.edu/~yandell/qtl/software/),
Richard Mott's happyR
2003 Jul 28
2
R compilation error on Solaris
Hello...
I tried to compile an R addon package, R/qtl on a Solaris machine and
I get this error. I know that R/qtl complies correctly on other
platforms (Windows, Mac, Linuxes, etc), so I am wondering what the
problem might be.
Any ideas?
Thanks,
Saunak
-----------------------------------
/export/home/sen/tmp <howrahbridge> <pts/5> R INSTALL
2017 Aug 16
1
Bias-corrected percentile confidence intervals
Hi folks,
I'm trying to estimate bias-corrected percentile (BCP) confidence
intervals on a vector from a simple for loop used for resampling. I am
attempting to follow steps in Manly, B. 1998. Randomization, bootstrap
and monte carlo methods in biology. 2nd edition., p. 48. PDF of the
approach/steps should be available here:
https://wyocoopunit.box.com/s/9vm4vgmbx5h7um809bvg6u7wr392v6i9
If
2013 Sep 06
2
Fwd:
---------- Forwarded message ----------
From: Waqas Shafqat <waqas1518@gmail.com>
Date: Fri, Sep 6, 2013 at 10:31 PM
Subject:
To: rosyara@msu.edu
sorry sir
i have istalled plantbreeding libraray..but when i give command
"require(plantbreeding)" then following message appear
> require(plantbreeding)
Loading required package: plantbreeding
Loading required package: qtl
Failed
2013 Mar 26
1
Can you help with local source file instalation?
Hi R,
I tried to install one local source package---"qtl" into R, but failed with the following message. I am using Macbook OS 10.8.3 with Xcode 4.6.1.
ld: warning: directory not found for option '-L/usr/local/lib'
ld: library not found for -lgfortran
collect2: ld returned 1 exit status
make: *** [qtl.so] Error 1
ERROR: compilation failed for package ¡®qtl¡¯
* removing
2008 Dec 01
3
exclude a vector value from another vector
Dear All,
I am trying to build a program which will take repeated samples (w/o
replacement) from a population of values. The interesting catch is that I
would like the sample values to be removed from the population, after each
sample is taken.
For example:
pop<-c(1,5,14,7,9,12,18,19,65,54)
sample(pop, 2) = lets say, (5,54)
## This is where I would like values (5, 54) to be removed from
2006 Apr 03
0
R/qtl
Dear all,
I am running qtl mapping. I have 75 RI lines with some residual
heterogeneous loci. The loci are code A, B or H(heterogeneous).
Questions:
1) R/qtl determine the data is F2 intercross.
2) Warning message about strange genotype pattern
> library(qtl)
> dat=read.cross("csv", file="rqtl_trt.csv")
--Read the following data:
75 individuals
2008 Mar 01
2
How to set up multiple spawns of R?
Sorry: resending this; didn't have a title on it.
Trying to set up multiple spawns of R
-------------------------------------------
Hi. I'm new to the list but I have a small problem with R. I'm trying to
set up multiple spawns of R active at the same time on an AMD with a dual
core in Vista so that I can cut down my permutation processing time.
I've installed R in multiple
2007 Apr 23
1
Dominance in qtl model
Hi,
I'm using R for a QTL analysis of SNP data. I was wondering if anyone
had any advice on fitting a dominance effect into the following
function;
> myfun4
function (x) {
x <- scan(con, nmax=169)
y <- unique(x[which(!is.na(x))])
if(length(y)>1) {
summary(lme(Ad ~ x, random= ~1|sire, na.action="na.omit"))
}
else {print("no.infomation")}
}
Con is the
2006 Sep 12
4
variables in object names
Is there any way to put an argument into an object name. For example,
say I have 5 objects, model1, model2, model3, model4 and model5.
I would like to make a vector of the r.squares from each model by code
such as this:
rsq <- summary(model1)$r.squared
for(i in 2:5){
rsq <- c(rsq, summary(model%i%)$r.squared)
}
So I assign the first value to rsq then cycle through models 2 through
1999 Oct 23
2
How can I Authenticate via MySQL ?
Hi ,
I want to set up my Redhat 6.0 Linux machine to Authenticate username and
password and other information for user that received from /etc/passwd &
/etc/shadow from MySQL server . How Can I do that ?
any Refrences or Manual for this is helpfull :)
Thanx
Hamid Hashemi
2004 Nov 07
0
Re : QTL interval mapping for outbred population
Dear lists,
Is there an add-on package in R for QTL interval mapping for outbred
population, eg. Haley-Knott regression method ?
Tanx
Stella
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2013 Apr 12
0
Biggest Fake Conference in Computer Science
We are researchers from different parts of the world and conducted a study on
the world’s biggest bogus computer science conference WORLDCOMP
( http://sites.google.com/site/worlddump1 ) organized by Prof. Hamid Arabnia
from University of Georgia, USA.
We submitted a fake paper to WORLDCOMP 2011 and again (the
same paper with a modified title) to WORLDCOMP 2012. This paper
had numerous
2006 Sep 24
1
Add-on patch to support .pls .asx .ram .qtl listing formats
Hi,
If you have multiple players installed on your PC/Mac .m3u will always
open the last media player who are the default in charge of the extension
and mime m3u.
On your web site you want maybe to force a link to open real media player
or quicktime/itune. You need to create a .pls to force winamp loading the
streaming because windows media player won't open .pls etc.
If you add a .pls
2004 Nov 29
2
problem with using transace
>I am trying to use the Hmisc function transace to transform predictors
>
> test<-cbind(flowstress,pressres,alloy)
> xtrans<-transace(x,binary=pressres',monotonic='flowstress', categorical='alloy')
>
>
>and I am getting the following message??
>Error in ace(x[, -i], x[, i], monotone = im, categorical = ic) :
> unused argument(s) (monotone ...)