similar to: wcstombs error when compiling package with Debian/Ubuntu

promptClass fails to identify methods associated with the class. Here is a fix: Index: promptClass.R =================================================================== --- promptClass.R (revision 41719) +++ promptClass.R (working copy) @@ -165,7 +165,7 @@ if (nmeths > 0) { .meths.body <- " \\describe{" for (i in 1:nmeths) { - .sigmat

Dear all, Since many years the following C++ code does compile on ALL Bioconductor servers (Linux, Windows, Mac) without any warnings: Int_t numsels = 0; //number of selected entries ... for (Int_t i=0; i<size; i++) { numsels = (arrMask[i] == 1) ? ++numsels : numsels; }//for_i Even on the recently added release server 'zin2' Linux (Ubuntu 12.04.4 LTS) the

Dear all, When running R CMD check on Windows XP to test my package I get the following warning message: "* checking line endings in C/C++/Fortran sources/headers ... WARNING Found the following sources/headers with CR or CRLF line endings: src/xpsDict.h" The problem is that this file is created by the compiler AUTOMATICALLY during the compilation process, and since the file is

Dear all, Since my package is based on S4 classes, I would like to know how to add a slot to an existing S4 class without breaking the code of users of my package. Assume the following S4 class: setClass("MyClass", representation(name = "character", type = "character", data = "data.frame" ), prototype(name =

Hi Christian, Chuck (and lists) It seems that the problem may be the strange behaviour of 'unstack' inside a function. See this thread in the R mailing list: http://tolstoy.newcastle.edu.au/R/help/04/03/1160.html Anyway, I got round the problem by using 'aggregate' instead of converting to a list and then tapply to sum values of metric. Probably more efficient as well. Thanks

I want to see some working examples on how to call C++ programs from R. Could somebody let me know which R packages mainly use C++ rather than C or Fortran?

Dear all, Recently, there was a question to use the same method for more than one class: https://stat.ethz.ch/pipermail/r-devel/2007-March/044809.html I have a variation of this question: Is it possible to use the same function name, e.g. "myfunction" in both, an S4 baseClass and derivedClass. The method "myfunction" in derivedCalss should extend the functionality defined

Dear all, Maybe, I am doing something wrong, but using R-2.5.0 on my Intel-Mac, I have problems using function callNextMethod() in method initialize. I am loading the following code as file "testS4.R": setClass("baseClass", representation(myname = "character", mydir = "character", "VIRTUAL"),

On a centos 4.6 box rpm -qa | grep glib glib-1.2.10-15 glibc-2.3.4-2.39 glibc-headers-2.3.4-2.39 glibc-common-2.3.4-2.39 dbus-glib-0.22-12.EL.9 glibc-kernheaders-2.4-9.1.100.EL glibc-devel-2.3.4-2.39 glib2-2.4.7-1 I am getting this type of error at times on a mail server *** glibc detected *** free(): invalid pointer: 0xbffa11b8 *** While I am researching this more, I am wondering if the

Dear all, Please, please I really need your help, since I am not able to solve the problem myself: It seems that until now most Windows users of my Bioconductor package "xps" use Windows XP, but recently a user tried to use it on Windows Vista where it crashed R immediately. Since I assume that some users may migrate to the upcoming Windows 7 where the problem will be the same, I

Dear all, For certain reasons I have to compile the source code of my package on Windows XP using Microsoft Visual Studio 9.0, thus I had to create a "Makefile.win". Now I have a question regarding compiler options /MT vs /MD for Makefile.win. The following partial output shows that when building my package on Windows XP using "R CMD build --binary xps" with compiler

Dear All, I am new in Itanium server Installation and I have installed all the CentOS4.4 ia64 CDs and I have try to install clustersuite packages and i am getting the following error messages like error: %post(package name here) scriptlet failed, exit status 255 and error: %pre(package name here) scriptlet failed, exit status 255 problem Cluster Suite RPMS are ccs-1.0.7-0.i686.rpm

Dear all, When running R CMD check on my Mac (Yosemite 10.10.5) I get suddenly NOTEs and WARNINGs that my tar.gz file does contain hidden files. However, when checking the corresponding directories with 'ls -al' (or with mc) none of these files does exist!! (with exception .BBSoptions). Here is a partial output of 00check.log: * using log directory

Dear Dirk, Yes, I know, however forget for one moment R. If I use tar independent of R it still should not create these hidden files. BTW, do you know where these hidden files are stored on the Mac? Best regards, Christian On 09/26/15 23:01, Dirk Eddelbuettel wrote: > > On 26 September 2015 at 22:41, cstrato wrote: > | Dear Simon, > | > | Thank you very much for your help, it

I'm trying to get Digital Image Pro 7.0 installed in opensuse11.1 (one of the conditions of my wife switching to linux). I've had a multitude of problems over the course of this. I've been unable to find a downloadable trial for this version. I am using wine 1.1.13 First when I tried installing it off the bat, it required MDAC, and would run the same script over and over saying

You reall have only one parameter in your model, c = a/b. You can't identify both a and b from your model, therefore, you should fit the linear model: lm(z ~ c* sin(x)/x) Ravi. ----- Original Message ----- From: cstrato <cstrato at aon.at> Date: Monday, February 2, 2004 2:28 pm Subject: [R] Robust nonlinear regression - sin(x)/x? > Dear all > > Since I did not receive any

Dear all, On the CRAN website http://cran.r-project.org/ it is currently not possible to get to the packages. Clicking on "Packages" or on "Contributed extension packages" results in Error 404: Object not found!, see: http://cran.r-project.org/web/packages/ Best regards, Christian _._._._._._._._._._._._._._._._._._ C.h.r.i.s.t.i.a.n S.t.r.a.t.o.w.a V.i.e.n.n.a

Dear all, To create a *.pdf file from a *.Rnw file I do: olddir <- getwd(); setwd(outdir); tryCatch({Sweave("QAReport.Rnw"); tools::texi2pdf("QAReport.tex", clean=TRUE) }, finally = setwd(olddir) ); This works fine, however 'clean=TRUE' does only work when: outdir <-

Dear all When trying to install my package on Windows XP on my Mac, I get the following error: ---------- Making package xps ------------ ... ... xpsDict.cxx "C:\Programme\Microsoft Visual Studio 9.0\VC\bin/link" /dll /def:xps.def /out:xps.dll fp10.obj -opt:noref -nologo -include:_G__cpp_setupG__Hist -include:_G__cpp_setupG__Graf1 -include:_G__cpp_setupG__G3D

My hardware is Sun V65x servers, (6GB RAM/2xXeon3GHZ/36GB SCSI disk). I have NFS repositories of Centos 3.1, Centos 3.4, Centos 4 & RedHat 9.0 ISO distros set up. I use boot floppies for each o/s with the same kickstart file which is of course altered to point at the desired distro. With Centos 4 I have to use a boot CDROM, of course, rather than floppy disk. I wish to set up servers with