similar to: Rd output garbled in some circumstances

I have code and documentation that don't match, but R CMD check didn't flag it. in mspath.R mspath <- function(formula, # formula with observed Markov states ~ observation times (required) qmatrix, # matrix of 1s and 0s with indices of allowed transitions (diagonal is ignored) (required) misc = FALSE, ematrix = NULL, # matrix

I get the error undefined symbol: Rf_rownamesgets when I try to load my package, which include C++ code that calls that function. This is particularly strange since the code also calls Rf_classgets, and it loaded OK with just that. Can anyone tell me what's going on? For the record, I worked around this with the general purpose attribute setting commands and R_RowNamesSymbol. I

The cran2deb archives target testing. I just pulled a package from them onto a stable system; the library loaded but said > library(akima) Warning message: package 'akima' was built under R version 2.10.0 Are this and other packages likely to work correctly with different R's (2.7 in the case of stable)? How well are they likely to work with a backported R? The R version would

I can't tell from the docs ("Writing R Extensions" 1.9.1) exactly what environment the tests, examples, and vignettes that R CMD check tries to run are in. In particular: 1) how do I get the package loaded? 2) how do I access data in the data/ directory? 3) where is the material in the other directories? (e.g., has inst/ material been installed? where?) Apparently (section 1.3)

Dear all, I have wrapped a C++ function in an R package. I allocate/deallocate memory using C++ 'new' and 'delete'. In order to allow user interrupts without memory leaks I've moved all the delete statements required after an interrupt to a separate C++ function freeMemory(), which is called using on.exit() just before the .C() call. I am concerned about the

Full_Name: Ross Boylan Version: 2.10.0 OS: Windows XP Submission from: (NULL) (198.144.201.14) Some of the help for setGeneric seems to have been garbled. In the section "Basic Use", 5th paragraph (where the example counts as a single line 3rd paragraph) it says <quote> Note that calling 'setGeneric()' in this form is not strictly necessary before calling

I've attached a script I wrote that pulls all the setGeneric definitions out of a set of R files and puts them in a separate file, default allGenerics.R. I thought it might help others who find themselves in a similar situation. The "situation" was that I had to change the order in which files in my package were parsed; the scheme in which the generic definition is in the

-----BEGIN PGP SIGNED MESSAGE----- Hash: SHA1 in isolinux, what's the maximimum text resolution (how many characters per screen)? i need to expand the f2 file and i don't know if the limit's been reached -----BEGIN PGP SIGNATURE----- Version: GnuPG v1.4.2 (MingW32) Comment: Created with GnuPG iD8DBQFDxZKhuo2HzR7zn7ERAhigAJ961DDboCIAiDzDNXlqeKQm6UBs0ACfVXDd PpXzWnLSlZWlNhfxrt6QSHI=

Hi all, It is my understanding that with HTB, the rate and the ceiling are divided over the elements of the class. E.g. using a rate of 100 kb and a ceiling of 2000 kb for a class with 10 elements on a 100Mb NIC, the effect of the ceiling will be that if all elements are generating their maximimum possible trafic they will be effectively limited to ~ ceiling / number of elements, in this case

Now available on CRAN. Package: mspath Title: Multi-state Path-Dependent Models in Discrete Time Description: Functions for fitting path-dependent (non-Markov) multi-state models to categorical processes observed at arbitrary times, optionally with misclassified responses, and covariates on transition or misclassification rates. Uses discrete-time approximation. Based on the Jackson's

Now available on CRAN. Package: mspath Title: Multi-state Path-Dependent Models in Discrete Time Description: Functions for fitting path-dependent (non-Markov) multi-state models to categorical processes observed at arbitrary times, optionally with misclassified responses, and covariates on transition or misclassification rates. Uses discrete-time approximation. Based on the Jackson's

Does anyone have any advice about profiling C/C++ code in a package under R? Does R need to be built specially for this to work? The FAQ has some entries about profiling but they cover R level profiling; I'm try to get at the C++ code I've written that is called from R. Primary target is Mac OS X. Thanks. Ross Boylan

well, the next place to go, if fsck isn't enough would be to to try debugfs(1) man debugfs. On Wed, Nov 18, 2015 at 8:39 PM, Boylan, Ross <Ross.Boylan@ucsf.edu> wrote: > I guess some of the trouble was that the virtual disk was mounted > read-only at the VM level. When I mounted read/write I was able to do > fsck, which gave messages about replaying the logs and a couple

I'm having problems with the voicemail prompts. The beginning of each prompt is garbled. Prompts "edian mail" and "assword" can be recognized, but when it starts on the short phrases it is completely garbled. It is almost like the subsequent phrase starts before the current phrase finishes. I have isolated the LAN to the * box and the phones, so LAN congestion is

All, Has anybody else experienced garbled voice between a phone using alaw/ulaw and one using iLBC? I have a Nokia E series phone with a preference to use iLBC and this works fine in Asterisk 1.2. However, since moving to 1.4 - I get garbled voice on Inbound (g711->iLBC). Outbound voice seems fine (iLBC->g711) though. It's not a 20/30ms framing issue as the phone uses 30ms

Hello, I have problem that menus on windows soft under wine are garbled (mojibake.) I'm Japanese and I've just started to use wine under CentOS5 because I want to use English-Japanese dictionary viewing software. Installing wine is fine both English and Japanese locale where wine related soft displays Japanese correctly even on menus. But my dictionary viewing soft under wine has

Hello Just a sanity check. I'm seeing a garbled display with top. I rebuild kernel and world a couple times, I even rm -rf /usr/include to make sure I was up to date. Anybody else seeing this? Thanks, Eric

Any recommendations for tools to diagnose and recover problems on an ext4 file system? In particular: root@jessie01:~# mount -o ro /dev/markov02/root /mnt/markov02 mount: wrong fs type, bad option, bad superblock on /dev/mapper/markov02-root, missing codepage or helper program, or other error In some cases useful info is found in syslog - try dmesg | tail or so. and e2fsck

Hi all! I can't for the life of me get xen to run - under both stable and testing the packages give a garbled local console right after dom0 is finished booting, just when one would expect a login prompt. The garbled screen looks a bit like screens full of kernel booting messages scrolling/paging by at breakneck speed. Lines are tearing and overlapping ... difficult to describe. Anyway, it

When I try to run a certain DirectX app, all of the fonts become garbled. A screenshot is at http://jackmcbarn.no-ip.org/login.png I've already tried setting HKEY_CURRENT_USER\Software\Wine\X11 Driver\ClientSideWithRender to N, which didn't appear to have any effect at all. Increasing the DPI increased the font size, but they were still garbled.