Displaying 20 results from an estimated 1100 matches similar to: "S4 dispatch and S3 "connection" objects"
2009 Dec 15
2
split.data.frame
Hello,
I very much enjoy "with" and "subset" semantics for data frames and was
wondering if we could have something similar with split, basically by
evaluating the second argument "with" the data frame :
split.data.frame
function(x, f, drop = FALSE, ...){
call <- match.call( )
fcall <- call( "with", data = call[["x"]],
2009 Dec 14
1
Printing to PDF in for
Hi everybody,
I would like to ask if it is possible using pdf function or some other to
print plots in cycle such that every new plot is on new page.
like this
pdf(file="D:/Plot.pdf",width = 9.25,height=9.25,
family="Helvetica",pointsize=8,bg="white")
for (i in 1:10){
x <- seq(1,40,1)
y <- 2*x+1+5*rnorm(length(x))
hist(y,freq = FALSE)
plot(density(y))
}
2009 Dec 15
3
Redirect standard output (PR#14148)
Full_Name: Joe Song
Version: 2.10.0
OS: Windows 7
Submission from: (NULL) (97.123.159.234)
Symptom: The following command in R
> system("program > run.log")
would not redirect standard output to the file "run.log".
This bug did not exist on Windows XP, but appeared on Windows 7 when the same
program is run.
2009 Dec 14
2
Combinations
Dear R helpers,
I am working on the scenario analysis pertaining to various interest rates. In this connection I need to form the various combinations as under :
Suppose I have two sets A = (a, b, c) and B = (x,y,z)
Then I can easily form the cominations as
(ax, ay, az, bx, by, bz, cx, cy, cz)
However, if I have say 5 variables, then total no of possible combinations will be 3^5 = 243.
2009 Dec 13
1
How to resolve include Rcpp.h problems?
Hi,
I am Linux Ubuntu 9.04 user. I'm using R-2.6.
Actually, I am developing R package for reading/writing 3D images. I needed
to use the R package Rcpp in order to make profit of available C/C++ codes.
My problem is that my C code is not able to include the Rcpp.h
In fact, when I run this command R CMD build rply, I got the following error
message in the file
2009 Dec 17
2
issue with using rm: cannot generate on-the-fly list
Hello,
I have the following problem when trying to use rm:
In a top level script file I have a loop iterating over some index. The loop
is not contained within a function, so the scope of variables declared in
the loop is global. Within this loop I generate several variables which
should be removed at the end of each iteration. To do this, I wrote a
function to clean up the workspace. An example
2009 Dec 08
2
automated image processing
Hi,
I am looking for a R package which is capable to process and analysis pictures of tissues (stained) in an automatic way.
I had a look on biops and EBImage (Bioconductor) but they are not automatic...
Did you already use/know a such package ?
Thanks,
- Martial
_________________________________________________________________
Tchattez en direct en en vidéo avec vos amis !
2009 Dec 02
2
Arithmetic on multiple files
Dear R-users,
I'd like to perform arithmetic functions on 1000 files containing a
2000x2000 matrix. Can anyone advise?
For example,
File1 File2 Output
1 1 1 4 4 4 5 5 5
2 2 2 + 5 5 5 = 7 7 7
3 3 3 6 6 6 9 9 9
Muhammad
--
Muhammad Rahiz | Doctoral Student in Regional Climate Modeling
Climate Research
2009 Dec 05
1
R brush for SyntaxHighlighter
Hello,
I've written a brush for R for the SyntaxHighlighter JavaScript
library. It allows you to display R code on a web page with the proper
syntax highlighting. It's available here:
http://demitri.com/code
Comments and suggestions for improvement are welcome!
Cheers,
Demitri
2009 Dec 04
2
selective subsetting of a correlation matrix
Dear All,
I have a correlation matrix say 'M' (4000x4000) for 4000 genes and I want to
subset it to 'N' (190x190) for 190 genes.
The list of those 190 genes are in variable 't'. So the idea is to read the
names of genes from variable 't' and subset the matrix M accordingly.
Any thoughts are welcome!
Best
Lee
[[alternative HTML version deleted]]
2014 Oct 22
1
Problems to compile examples of RInside
Hello,
I have some problems to migrate to R >3.0 my devel machine (R.2.15.2). So I decided to start from scratch with a brand new virtual machine.
Downloaded latest network install of debian testing, not stable (jessie/sid, SMP Debian 3.16.3-2 (2014-09-20) x86_64 GNU/Linux) installed only with ssh-server and basic utilities (no X).
Then I installed R by:
apt-get install
2006 Feb 24
18
I need more bling!
Hello everyone,
I just showed a friend a prototype of a site offering a service I''m
trying to sell (sorry, not on the Internet yet - he saw it at my
house).
His comment: "Looks like it does everything, but also looks pretty
ugly. You''re not going to wow anybody with that". Sitting back and
thinking about it, he''s dead right - it needs some bling to make it
2009 Dec 11
12
Literature analysis
Dear all,
i am new in R. I am writing a review paper about batteries. However, i
am interested in analyzing all the papers by keywords, author,
references and year.
This could be done by "refviz" a software, which is only running on
windows machines and which is not free.
So my question to you is, is it somehow possible to write a script that
can do all of this work?
And if yes, with
2015 Nov 04
1
setOldClass("xts")
Hello,
I apologize that I am cross posting here after getting no answer from
my initial
question on stack overflow
<http://stackoverflow.com/questions/33492601/r-setoldclass-only-if-needed>.
I should certainly have posted it first here..
I am using 3 packages:
- xts
- quantmod
- 'myPackage'
quantmod is creating a union class by doing:
setOldClass("xts");
2019 Sep 06
1
Cryptic error message from namespaceExport
Dear Michael,
my package has setOldClass("inla") and the NAMESPACE
contains exportClasses(inla) and importFrom(INLA, inla.posterior.sample)
the old version of INLA uses the S3 class "inla" but does not export it.
the new version of INLA has setOldClass("inla") and the NAMESPACE
contains exportClasses(inla)
installing my package in combination with an older INLA
2007 Apr 15
1
unable to find inherited method for function "edges", for signature "ugsh", "missing"
I am new to using S4 methods and have run into this problem (on Windows XP using R 2.4.1): I am writing a package in which I use the graph package. I define my own classes of graphs as:
setOldClass("graphsh")
setOldClass("ugsh")
setIs("ugsh", "graphsh")
(I know that I "should have" used setClass instead - and I will eventually - but right now
2009 Sep 15
2
S3 objects in S4 slots
Hello,
I am the maintainer of the stringkernels package and have come across
a problem with using S3 objects in my S4 classes.
Specifically, I have an S4 class with a slot that takes a text corpus
as a list of character vectors. tm (version 0.5) saves corpora as
lists with a class attribute of c("VCorpus", "Corpus", "list"). I
don't actually need the
2019 Sep 06
2
Cryptic error message from namespaceExport
Dear all,
Today I got this error message (R 3.6.1) when installing my package:
Error: package or namespace load failed for ?inlatools? in
namespaceExport(ns, exports):
undefined exports: .__C__inla
My package was using setOldClass("inla") and exported the "inla" class via
the NAMESPACE. It imports functions from the INLA package. Older versions
of the INLA package did not
2005 Aug 11
1
Registering S3 class from external package
The package I'm working on can extract data from external
packages but would otherwise have no dependency on them.
However, I desire to be able to dispatch based on an
external S3 class if its package is attached (.First.lib).
My code is S4-based and its package has NAMESPACE.
Registering the external class prior to the other
package being attached doesn't seem to work so I am
attempting
2014 Oct 07
1
S4 Method Dispatch for Class Defined as Attribute
Hello,
I am writing an interface to some functions from the CRAN package pamr, which is poorly written.
I have a S4 method I declared with setMethod. I'd like to provide a signature of "pamrtrained" which is the class of object that training creates. The last two lines of code of pamr.train are :
class(junk) = "pamrtrained"
junk
How can I dispatch on these kinds