similar to: make fails on R r50499 ( openSuSE 11.0 x86-64)

minimal reproducible example plot(1,1) identify(1,1) # or locator() now, trying to close the window by clicking on the cross of the upper right corner causes Rgui (and Rterm) to crash. I see the same behaviour on 2 different Windows PC (one with Win 8.1 and one with Win 10). I did not see the problem in linux (see below) WINDOWS ************** > sessionInfo() R version 3.3.0 beta

If of any help, I can reproduce this (on Windows 7) back to at least R 3.0.3 but it's not there in R 3.0.0. (I have *not* checked with R 3.0.1 and 3.0.2 which I don't have installed). /Henrik On Tue, Apr 5, 2016 at 8:23 AM, Duncan Murdoch <murdoch.duncan at gmail.com> wrote: > Thanks, I'll track this down. > > Duncan Murdoch > > > On 05/04/2016 9:35 AM,

Dear all, switch() called with just the EXPR argument causes R to hang so that the only way to stop it is to kill R. Reproducible example: > switch(EXPR="a") the internal C subroutine behind switch is do_switch located in R/src/main/builtin.c For convenience I reproduce it below. ***************************************************************************** SEXP attribute_hidden

Thanks, I'll track this down. Duncan Murdoch On 05/04/2016 9:35 AM, Simone Giannerini wrote: > minimal reproducible example > > plot(1,1) > identify(1,1) # or locator() > > now, trying to close the window by clicking on the cross of the upper > right corner causes Rgui (and Rterm) to crash. > > I see the same behaviour on 2 different Windows PC (one with Win 8.1

On 05/04/2016 11:56 AM, Henrik Bengtsson wrote: > If of any help, > > I can reproduce this (on Windows 7) back to at least R 3.0.3 but it's > not there in R 3.0.0. (I have *not* checked with R 3.0.1 and 3.0.2 > which I don't have installed). That doesn't necessarily mean that 3.0.0 was fine. It's a segfault (I'd guess some memory being accessed after being

Hi, when running the following on a fresh R, library("IRanges") annotation showMethods("annotation") Biobase:::annotation showMethods("annotation") I get (see the "^^^^^" marked output at the bottom): > library("IRanges") Carico il pacchetto richiesto: 'IRanges' The following object(s) are masked from package:base :

Dear all, following the thread http://tolstoy.newcastle.edu.au/R/e2/devel/07/09/4338.html regarding the bug in the partial autocorrelation function for multivariate time series. I have prepared a web page with patches and relevant information. http://www2.stat.unibo.it/giannerini/R/pacf.htm Please do not hesitate to contact me for further clarifications regards Simone --

According to ?parCapply: parRapply and parCapply always return a vector. This appears not to be the case in the following minimal reproducible example: > library(parallel) > nslaves <- 2 > cl <- makeCluster(nslaves) > X <- matrix(2,nrow=3,ncol=4) > X <- rbind(c(1,1,0,1),X) > tv <- parCapply(cl,X,FUN=function(x){ +

Dear all, I found the following behaviour > rf(5,Inf,Inf) [1] 1 1 1 1 1 but > qf(0.1,Inf,Inf) [1] NaN Warning messages: 1: In qf(0.1, Inf, Inf) : value out of range in 'lgamma' 2: In qf(p, df1, df2, lower.tail, log.p) : NaNs produced incidentally, > pf(1.00000000000001,Inf,Inf) [1] 1 > pf(1.0000000000000001,Inf,Inf) [1] 0.5 Is this the expected behaviour? Thanks

Dear all, it looks like that something is wrong with the /bin/windows/base/rpatched.html page as it seems pointing to the 2.8.1rc version. Also, I do not know if it is relevant but notice the dates of the following files on ftp://ftp.stat.math.ethz.ch/Software/CRAN/bin/windows/base/ R-2.8.1pat-win32.exe 31963 KB 22/12/2008 16.15.00 R-2.8.1rc-win32.exe 31991 KB 25/12/2008 9.30.00 thank

Dear all, there seems to be a problem with displayed legends when a multiple figure environment is used, see the following example: par(mfrow=c(1,2)) curve(dnorm,col=4,from=-4,to=4); legend(-4,0.3,legend="curve",lty=1,col=4) legend(-4,0.2,legend="curve",lty=1,col=4) On my machines the first time the command legend() is issued the legend box stretches over the curve.

I have found a strange "ifelse" behaviour (I think) This works: > ifelse(T,1+1,1+2) [1] 2 > ifelse(F,1+1,1+2) [1] 3 Maybe I missed something about R internals, but why > ifelse(T,print("hello"),print("goodbye")) [1] "hello" [1] "hello" > ifelse(F,print("hello"),print("goodbye")) [1] "goodbye" [1]

Dear all, I think I have found a buglet in plot.ts plot.ts(x=1,type="n") # correct: does not show the plot plot.ts(x=1,y=1,type="n") # not correct: does show the plot I did not investigate the problem in depth but it could be related to the switch xy.labels, in fact plot.ts(x=1,y=1,type="n",xy.labels=TRUE) # does show the plot

Dear List I'm trying to install a package not present in cran named A2R ( http://addictedtor.free.fr/graphiques/RGraphGallery.php?graph=79) After running the demo script I retrieve the following error: cannot change value of locked binding for '._a2r_counter' Please could someone give to me a tip about my error? Thank you very much Here is my sessionInfo() R version 2.15.0

Dear list, I do not know what would be the 'correct' answer to the following but I think that they should return the same value to avoid potential problems and hard to debug errors. Regards, Simone --------------------------------------- > NCOL(NULL) [1] 1 > NROW(NULL) [1] 0 > sessionInfo() R version 4.3.1 RC (2023-06-08 r84523 ucrt) Platform: x86_64-w64-mingw32/x64 (64-bit)

Dea-R community. I'd like to draw your attention to an issue I have recently encountered while doing my current data analysis. I've got an unexpected (to me) result from the command: > augPred(lmList(my.object)), 'my.object' being a grouped data frame of class: > class(my.object) [1] "nfnGroupedData" "nfGroupedData" "groupedData"

Hi people, I have a text file like this one posted: snp_id gene chromosome distance_from_gene_center position pop1 pop2 pop3 pop4 pop5 pop6 pop7 rs2129081 RAPT2 3 -129993 "upstream" 0.439009 1.169210 NA 0.233020 0.093042 NA -0.902596 rs1202698 RAPT2 3 -128695 "upstream" NA

Dear all, from the help page of quantile: "x ??? numeric vectors whose sample quantiles are wanted. Missing values are ignored." from the help page of IQR: "x ??? a numeric vector." as a matter of facts it seems that both quantile() and IQR() do not check for the presence of a numeric input. See the following: set.seed(11) x <- rbinom(n=11,size=2,prob=.5) x <-

Dear all, I found the following behaviour with pacf() in the multivariate case, set.seed(10) x <- rnorm(1000,sd=10000) y <- rnorm(1000,sd=1) pacf(ts(cbind(x,y)),plot=FALSE,lag.max=10) Partial autocorrelations of series 'cbind(x, y)', by lag , , x x y 0.047 ( 1) 0.000 ( -1) 0.011 ( 2) 0.000 ( -2) 0.005 ( 3) 0.000 ( -3) 0.013 ( 4)

Dear all, it looks like fix() changes the class of mts objects, here is a reproducible example (tested both on WinXP and Linux): > x <- ts(cbind(1:5,1:5)) > x Time Series: Start = 1 End = 5 Frequency = 1 Series 1 Series 2 1 1 1 2 2 2 3 3 3 4 4 4 5 5 5 > class(x) [1] "mts" "ts" > edit(x)