similar to: make check fails in r49613

Full_Name: Mike Pacey Version: 2.5.1 OS: SUSE SE Linux 9.3 Submission from: (NULL) (194.80.32.10) Versions 2.5.0 and 2.5.1 currently fail "make check" on my system due to a silent failure in the call to Rd_db("base"): ----- > ### Name: Rdutils > ### Title: Rd Utilities > ### Aliases: Rd_db Rd_parse > ### Keywords: utilities documentation > > ### **

Hi, I am having problems installing the XML package with R-devel on freebsd. If I simply do install.packages("XML"), it says that the parser.h file is not found. After reading the INSTALL file, I have set setenv XML_CONFIG /usr/local/bin/xml2-config setenv LIBXML_LIBDIR -L/usr/local/lib setenv LIBXML_INCDIR -I/usr/local/include/libxml2/libxml and install.packages("XML")

Hi folks, I'm attempting to compile and install 2.5.0, and "make check" is failing one of the earlier sanity tests. I'll append the relevant portion of the Rout.fail file below, but I've narrowed it down manually to a single command: > sessionInfo() R version 2.5.0 (2007-04-23) x86_64-unknown-linux-gnu locale:

Hi (Duncan?), The other day I noticed some characters will cause errors in R CMD CHECK because of parse_Rd(), and AFAIK, these chars include '%', '{' and '}'. For example, note the comments in the example section: %~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~% \name{testfun} \Rdversion{1.1} \alias{testfun} \title{ A Test } \description{ A test } \usage{ testfun() } \value{ NULL }

Dear R developers, When building/checking my package (in R 2.6.1 under windows) I run into some messages that I do not completely understand and that do not give me precise enough leads to pinpoint where the error in my package is. I would be very grateful for any suggestions. Did anyone else encounter the same problem before? When building or installing the package, I get the message (no error

I tried to compile R-beta_2010-10-02_r53128 on FreeBSD 9.0-CURRENT (amd64) with gcc-4.4.5 and it fails: ----------------------------------------- gcc -std=gnu99 -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -c sysutils.c -o sysutils.o sysutils.c: In function

After building and installing R-devel from 21/07/2011 on FreeBSD 9.0-CURRENT (amd64), starting R gives the following warning: [..snip..] Beim Start - Warnmeldung: package 'datasets' in options("defaultPackages") was not found This happens with all versions after 14/07/2011. I think it is related to NEWS Sat, 16 Jul 2011 CHANGES IN R-devel PACKAGE INSTALLATION Packages without

I've rolled up R-2.9.2.tar.gz a short while ago. This is a maintenance release and fixes a number of mostly minor issues. See the full list of changes below. You can get it from http://cran.r-project.org/src/base/R-2/R-2.9.2.tar.gz or wait for it to be mirrored at a CRAN site nearer to you. Binaries for various platforms will appear in due course (Duncan Murdoch is out of town, so Windows

I've rolled up R-2.9.2.tar.gz a short while ago. This is a maintenance release and fixes a number of mostly minor issues. See the full list of changes below. You can get it from http://cran.r-project.org/src/base/R-2/R-2.9.2.tar.gz or wait for it to be mirrored at a CRAN site nearer to you. Binaries for various platforms will appear in due course (Duncan Murdoch is out of town, so Windows

R Compiliing or installation failure on FreeBSD 9.0-RELEASE FreeBSD ; I386 box. configuring with the default settings, no 'options' => ./configure ... ... ... checking whether gcc -std=gnu99 supports -c -o FILE.lo... yes checking for gcc -std=gnu99 option to support OpenMP... -fopenmp checking how to get verbose linking output from fc... configure:

Trying to install Rjava on FreeBSD 9 and am getting the following error: > install.packages('rJava') trying URL 'http://cran.cnr.Berkeley.edu/src/contrib/rJava_0.9-3.tar.gz' Content type 'application/x-gzip' length 537153 bytes (524 Kb) opened URL ================================================== downloaded 524 Kb * installing *source* package 'rJava' ... **

Greetings I am trying to build a 9.0 Stable system and am getting this error when building xorg meta port. I have clang set up as follows make.conf cat /etc/make.conf CC=clang CXX=clang++ CPP=clang-cpp # added by use.perl 2012-07-09 07:23:29 PERL_VERSION=5.16.0 src.conf CC=clang CXX=clang++ CPP=clang-cpp uname -a FreeBSD pita9bsd.shasta204.local 9.0-STABLE FreeBSD 9.0-STABLE #0: Sun Jul 8

I've rolled up R-2.10.0.tar.gz some hours ago. This is a development release which contains a number of new features, notably a brand new HTML based dynamic help system. Also, a number of mostly minor bugs have been fixed. See the full list of changes below. You can get it from http://cran.r-project.org/src/base/R-2/R-2.10.0.tar.gz or wait for it to be mirrored at a CRAN site nearer to

I've rolled up R-2.10.0.tar.gz some hours ago. This is a development release which contains a number of new features, notably a brand new HTML based dynamic help system. Also, a number of mostly minor bugs have been fixed. See the full list of changes below. You can get it from http://cran.r-project.org/src/base/R-2/R-2.10.0.tar.gz or wait for it to be mirrored at a CRAN site nearer to

(D'oh. Forgot to change the Subject: line...) I've rolled up R-2.10.0.tar.gz some hours ago. This is a development release which contains a number of new features, notably a brand new HTML based dynamic help system. Also, a number of mostly minor bugs have been fixed. See the full list of changes below. You can get it from http://cran.r-project.org/src/base/R-2/R-2.10.0.tar.gz or wait

(D'oh. Forgot to change the Subject: line...) I've rolled up R-2.10.0.tar.gz some hours ago. This is a development release which contains a number of new features, notably a brand new HTML based dynamic help system. Also, a number of mostly minor bugs have been fixed. See the full list of changes below. You can get it from http://cran.r-project.org/src/base/R-2/R-2.10.0.tar.gz or wait

Hi list ! I have a server with Samba4 (Beta4) in a FreeBSD 9 with bind9, but I'm having problems with the update named, I can not make it work. Here, output command samba_dnsupdate --verbose: http://tinypaste.com/b125ca6c Here, debug from named: http://tinypaste.com/fffbea46 Bind: ad# named -V BIND 9.9.1-P1 built with '--localstatedir=/var' '--disable-linux-caps'

Hi, I am building 2.1.0 (re-release version, if that matters) on a Windows XP machine. Following the instructions 3.1 "Building from source" in R-admin.html, I managed to get up to 3.1.6. But when I try to build the recommended packages, I get C:\hiro\codes\proj\R-2.1.0\src\gnuwin32>make recommended --- Unpacking recommended packages ---- VR make[1]: *** No rule to make target

hi, can anyone confirm the following problem? when i do dos> rcmd rd2dvi --pdf my-package-name i get dos> Can't open perl script "c:\PROGRA~1\r\rw1091/bin/rd2dvi": No such file or directory might the problem be in (double back slashes rather than forward slashes) R-1.9.1\src\gnuwin32\front-ends\rcmdfn.c(251): strcat(cmd, RHome); strcat(cmd, "/bin/Rd2dvi.sh");

Hi, I am getting an error from one of the test files tests/reg-tests-1.R using the unstable version (r50179). (i've learned my lessons; this is a clean build.) The tail of reg-tests-1.Rout.fail is Loading required package: myTst building package pkgA ... installing package pkgA using file pkgA_1.0.tar.gz ... Error in as.octmode(mode) : invalid digits Error in install.packages(r, lib =