similar to: Changes to Rd handling in R-devel

Hello, Here's an example that renders correctly using Rd2txt / Rd2latex / R CMD Rd2pdf, but has problems under Rd2HTML: \name{foo} \title{foo} \section{foo}{ This should be on a separate paragraph This should be on a separate paragraph This should be on a separate paragraph \Sexpr[stage=render,results=rd]{ paste( rep('Sexpr: This should be on a separate

Hi, I have spent a few hours on the R-exts manual and the documentation of parse_Rd() (as well as the PDF document in the references), but I still have not figured out what results=rd means. I thought I could use an R code fragment to create an Rd fragment dynamically. Here is an example, in which I was expected the output to be a describe list <DL> in HTML, but it turns out not to be true.

I've just committed code that allows R to be built with support for dynamic help pages using \Sexpr in Rd files. Define USE_NEW_HELP and the R function tools:::.convertRdfiles will be used instead of the Perl RdConv script, supporting \Sexpr and using the new R converters. Currently only text help has the macros evaluated when the user asks for help; the others are rendered at install

Marc, >I have a large .Rnw file and was in the process of doing some debugging. >I had set some R chunks to 'eval=false' in the process. This resulted in >some R objects not being created that were in turn used in the >subsequent \Sexpr's. I have often the same problem, I'm using a construct like : <<eval=F>>= x <- rnorm(100) @ I have

Hi: I am trying to create a dynamic latex table using \Sexpr{} but it's not evaluating it. I also tried the example below without Sweave and also fails. I have also copied the Sweave.sty to my working directory but nothing seems to work. Do I need to have certain package in order to run \Sexpr{}? \documentclass[a4paper]{article} \usepackage{C:/R/R-2.8.1/share/texmf/Sweave} \begin{document}

With a pretty recent version of R 2.11.0 (devel,unstable, svn 50178) on Linux I could not install version 1.5-8 of zoo (the current on on CRAN): % R-devel CMD INSTALL -l Rlib3 zoo * installing *source* package 'zoo' ... ** R ** inst ** preparing package for lazy loading ** help *** installing help indices converting help for package 'zoo' finding

Hi. I am having difficulty making \Sexpr work as desired. Specifically, the pdf and the text versions of the help system differ, and I can't reproduce the example on page 63 of the R Journal article by Murdoch and Urbanek (Vol 1/2, December 2009). Is there an example package that I could examine for Best Practice? thanks -- Robin Hankin Uncertainty Analyst hankin.robin at gmail.com

Hola Tengo un problema con Sweave y xtable, concretamente quiero cambiar el color según un criterio, creo que es más fácil explicar con los siguientes ejemplos, uno puede correr directamente porque es R, al siguiente código hay que guardarlo como Rnw, y luego puede ser corrido en R, donde seguramente al correr este se darán cuenta de mis dos problemas porque saltan al abrir el pdf que se obtiene

Hi, another Rd related issue I encountered is that if an error occurs in an \Sexpr in an Rd file, then on get the following error: * checking for portable compilation flags in Makevars ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking examples ... ERROR Error in paste(before, x, after, sep = "") : object 'exfile' not found Execution halted

I've just committed the parse_Rd() function to R-devel. This is a parser for Rd files, described in http://developer.r-project.org/parseRd.pdf It is not identical to the current parser, and about a dozen of the base man pages currently signal syntax errors. It also detected errors in 10 files that were errors according to both definitions, but were missed by the current system, and

Hello, I'm trying to inject html code into an Rd file. For example : \name{test} \alias{test} \title{test} \description{ \if{html}{ \Sexpr[stage=render,results=text,echo=FALSE]{ "<b>hello</b>" } } } when this file is rendered, instead of having "hello" in bold, I get <b>hello</b>, i.e. characters < and > are replaced with html entities :

I have come across an apparent bug in the operation of Sweave. If I load the package R2HTML then execution of \Sexpr{} in an *.Rnw file no longer works. The \Sexpr{} code is simply written to the *.tex file. Below are my *.Rnw file, commands, and output. The Sweave file, Sweave-test-1_short.Rnw: % -*- mode: noweb; noweb-default-code-mode: R-mode; -*- \documentclass{article} \title{A Test

Hi, The following command: R CMD Rd2pdf --no-preview --output=./tmp.pdf --title=test genefu-package.Rd run against this file: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/genefu/man/genefu-package.Rd (username: readonly; password: readonly) produces a very verbose error (see below) with R version 2.15.0 alpha (2012-03-07 r58622). The .Rd file has these lines in it: Version: \tab

# HG changeset patch # User Jim Fehlig <jfehlig@suse.com> # Date 1360861948 -3600 # Node ID 0f9c7503650fa1b1103b769e1129d66ff614b2ad # Parent cffb489a6df37d8d114e7d2d53a7a85d14e8f968 tools/xend: Only add cpuid and cpuid_check to sexpr once When converting a XendConfig object to sexpr, cpuid and cpuid_check were being emitted twice in the resulting sexpr. The first conversion writes

Full_Name: Georgi Boshnakov Version: 2.10.1pat OS: Windows XP Submission from: (NULL) (130.88.123.205) When calling programmatically function curve() from package:graphics I experienced some trouble since it reports stop("'expr' must be a function or an expression containing 'x'") even if expr is "expression". Naturally, the user message uses

Hi all, On FC5, using: Version 2.3.1 Patched (2006-08-06 r38829) and today's R version 2.4.0 alpha (2006-09-19 r39397) with the following .Rnw file: \documentclass[10pt]{article} \begin{document} This line should print '2': \Sexpr{1 + 1} %% This line should NOT print '2': \Sexpr{1 + 1} \end{document} The \Sexpr in the second line is processed even though the

Hi all, On FC5, using: Version 2.3.1 Patched (2006-08-06 r38829) and today's R version 2.4.0 alpha (2006-09-19 r39397) with the following .Rnw file: \documentclass[10pt]{article} \begin{document} This line should print '2': \Sexpr{1 + 1} %% This line should NOT print '2': \Sexpr{1 + 1} \end{document} The \Sexpr in the second line is processed even though the

I would like to create \examples{} in the manual dynamically, and while it is possible to do this with a \Sexpr at the top level, R CMD check issues a warning for it. (See below.) Is it intentional that \Sexpr is not allowed at the top level? The Rd grammar allows this, but R CMD check does not. Is there any other way to generate/modify the \examples{} section dynamically? Thanks, Gabor In

Dear List, First off, my deepest gratitude to the Sweave developers: this tool has improved my quality greatly. A question in my work I use \Sexpr{} statements scalar values and the xtable package for all manner of tables. What I'd like to do is to use a vector inline, rather than a whole separate table. Something like: %%%%%%%%%%%%%%%% begin code % Latex junk % Sweave block:

On Thu, Jul 12, 2018 at 12:23 PM Duncan Murdoch <murdoch.duncan at gmail.com> wrote: > > On 12/07/2018 6:33 AM, G?bor Cs?rdi wrote: > > I would like to create \examples{} in the manual dynamically, and > > while it is possible to do this with a \Sexpr at the top level, R CMD > > check issues a warning for it. (See below.) > > > > Is it intentional that