similar to: R CMD check problem

Hello: What do you recommend I do to get past cryptic error messages from "R CMD check", complaining "No such file or directory"? The package is under SVN control, and I reverted to a version that passed "R CMD check", without eliminating the error. The "00install.out" file is short and bitter: cat: ./R/Copy: No such file or directory cat:

Hello, All: ????? Roughly a decade ago, I added "matplot.Date" and "matplot.POSIXct" to the "fda" package, so we could get reasonable labeling of the horizontal axis when "x" was class "Date" or "POSIXct".? I also added a local version of "matplot.default" that just changes the defaults for "xlab" and

Hello: I've found structures like "normal-bracket50bracket-normal" in help files for R packages including the following: * "mergeprepare" and "mergematrices" in a document dated March 3, 2004 by Richard Mott; the second contains "normal-bracket30bracket-normal". * "Fperm.fd" and "tperm.fd" in the

Hello, All: fda_2.2.8 (functional data analysis) is now available on CRAN. This revision includes the following improvements: 1. A bug in pca.fd has been fixed. 2. Many functions have a new argument "returnMatrix", which if TRUE allows the function to use the sparse matrix representations in library(Matrix). This should allow users to solve some larger

Hi All, I'm using R1.8.1 on Windows XP. I'm having trouble producing an R library from source code. A colleague has written the source code, in Unix. I've copied the source code across to Windows (with the help files, data files, description and index) and am trying to compile it into a library. I've "sourced" each of the *.r files and they appear to work.

I love the routes feature for RoR...until now. I''m trying to write tests to make sure my urls are correctly mapping to the routes I expect them to map to. This is driving me nuts because I simply can''t get any of my tests to pass. I have thus concluded that routes must work differently than I thought. If someone could possibly point me in the right direction, I would really

How can I define environments within a function so that they are visible to calls to a sub-function? I have defined an objective function, ProfileErr = function(params,...) which I would like to optimize using standard routines (optim, nlminb,....) but which contains auxiliary variables which need to be updated along with params. No optimization routine in R that I have found has facilities

Full_Name: Andrew Hooker Version: 2.3.1 OS: windows xp sp2 Submission from: (NULL) (83.253.8.162) Hi, I think there is a bug in the windows graph history procedure, here is what happens: 1. open R 2. 'library(lattice)' 3. 'xyplot(0~0)' 4. Turn on recording in the graphical window 5. Add plot to history 4. 'plot.new()' 5. 'xyplot(1~1)' Try to 'pageup' to

Hi all, I am setting up a new AD server with Samba 4.1.11 from the FreeBSD ports. I struggle with the internal DNS. I add a new CNAME record but it does not show up properly. I gave the AD domain a new DNS domain (domain.fda) and the server the name samba4.domain.fda. I am using the internal DNS, and a forwarder to a bind server in the same network. After the AD provision I have this here

Hi, All: What might cause "R CMD check" to report, "could not find function" for a function that has long been in the 'fda' package? Both Jim Ramsay in Ottawa, Canada, and I in San Jose, CA, get this same error. I replicated it with a fresh, anonymous checkout from R-Forge (svn checkout svn://svn.r-forge.r-project.org/svnroot/fda). With this, I did

I hope that Marc doesn't mind, but I felt that part of his recent post was important enough to deserve it's own subject line rather then being lost in a 60-msg-long thread... On Sun, Jan 11, 2009 at 10:08 AM, Marc Schwartz <marc_schwartz at comcast.net> wrote: ... I strongly believe that the comments regarding R and the FDA are overly negative and pessimistic. The hurdles to

I have just upgraded from R 1.7.3 to R 1.9.0 and have found that the predict function no longer works for rpart: > predict(hmmm,sim3[1:10,]) Error in predict.rpart(hmmm, sim3[1:10, ]) : couldn't find function "pred.rpart" I have re-installed the rpart package to no avail. Any ideas? Giles Hooker

Yesterday I just noticed the new document on R and regulatory aspects for biomedical research posted at http://www.r-project.org/doc/R-FDA.pdf Coming from an institution that performs a large number of clinical trials for FDA and being an advocate of R myself, I have found that the following issues usually come up when discussing the use of R for FDA trials: 1. Most FDA submissions come down to

This error can arise when getOption("width") is too small. 80 seems to be the limit for me with R-3.3.2 on Windows. Bill Dunlap TIBCO Software wdunlap tibco.com On Wed, Mar 8, 2017 at 10:28 PM, Spencer Graves <spencer.graves at prodsyse.com> wrote: > Hello: > > > I tried "debug(help)" with the problem mentioned below. It stopped > with a call to

Hello: I'm having problems creating a real NAMESPACE to replace the pro forma one in the fda package on R-Forge. "R CMD check" complains, "Error: package 'zoo' could not be loaded ... there is no package called 'zoo'"; see below. I get this both with and without "import(zoo)" in NAMESPACE. Suggestions? Thanks,

Hi, I am wondering if there is a way to change the value of the "record" option in a graphics device that is already open (and accepts this option). I don''t want to open a new device with, for example "dev.new(record=T)", but just want to change the settings of the current device. This can be done by pointing and clicking on the "history" tab of a

Hello, I am using the mda package and in particular the fda routine to classify in term of gear a set of 20 trips. I preformed a flexible discriminant analysis (FDA) using a set of 151 trips. FDAT1 <- fda(as.factor(gear) ~ . , data =matrizR) A total of 22 predictors were considered. 20 of the predictors are "numeric" and 2 are "factors/discrete". The resulting FDA

Hello: A call to help(..., help_type='text') fails with "package='fda": > install.packages('fda') > help(package='fda', help_type='text') Error in formatDL(nm, txt, indent = max(nchar(nm, "w")) + 3) : incorrect values of 'indent' and 'width' I have this wrapped inside "try" in

I am developing a new R package and am now checking it for submission to CRAN. The some functions in the package make use of the sparse matrix routines in the package 'Matrix'. When these are loaded in R, they create no problems. However, when running R CMD check, I run into the following error in executing the examples in a .rd file: > DD = Matrix(diag(1,200),sparse=TRUE) >

Hello, All: The CRAN checks for the "fda" package includes one error: The error most likely occurred in ... file.copy2 ... Error: unprotect_ptr: pointer not found Execution halted (http://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-debian/fda-00check.html) The help page for "file.copy2" includes "\examples" with everything wrapped in