similar to: package gsl assumes incorrect gcc version during install (PR#10451)

On 22 November 2007 at 20:00, leviwaldron at gmail.com wrote: | Full_Name: Levi Waldron | Version: 2.5.1 | OS: Ubuntu Gutsy | Submission from: (NULL) (206.248.157.88) | | | I installed libgsl0-dev then tried to install the gsl cran package, | unsuccessfully (see output below). As a workaround I created a symbolic link to | /usr/bin/gcc-4.2, ie: | | sudo ln -s /usr/bin/gcc-4.1 /usr/bin/gcc-4.2

On 13/09/2017 9:10 AM, David Brayford wrote: > Hi Duncan, > > The output of gsl-config --version > 2.3 > > The output of gsl-config --cflags > -I/lrz/sys/libraries/gsl/2.3/include > > The output of gsl-config --libs > -L/lrz/sys/libraries/gsl/2.3/lib -lgsl -lgslcblas -lm > > gsl_version.h cat output > #define GSL_VERSION "2.3" > #define

On 13/09/2017 5:23 AM, Brayford, David wrote: > When I try to install gsl in R I get the error Need GSL version >= 1.12 . However, I have version 2.3 of gsl installed on the system, which is picked up earlier in the configure process (see below). Is it possible for someone to fix this error in the configure script? > > checking for gsl-config...

Newbie here (to R) and running Linux... > install.packages("gsl","~/R") ... trying URL 'http://cran.wustl.edu/src/contrib/gsl_1.8-4.tar.gz' Content type 'application/x-tar' length 57051 bytes opened URL ================================================== downloaded 55Kb * Installing *source* package 'gsl' ... checking for gcc... gcc checking for C

I am trying to install the gls package (a wrapper for GNU scientific library special functions) package under Ubuntu 5.10. I have gls-bin (the debian GNU Scientific Library binary package). When I try to install the R package, I receive the following. > install.packages("gsl",dependencies=T) Warning in install.packages("gsl", dependencies = T) : argument

Hi I want to install the R package gsl, which is a wrapper to the library GSL. Installation fails as it seems that I did not install the right GSL library: * Installing *source* package 'gsl' ... checking for gcc... gcc checking for C compiler default output... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of

I'm attempting to install the gsl package using the following command: install.packages("c:/users/mike/documents/R/win-library/gsl_1.9-9.tar.gz",repos=NULL,type="source") My attempt is failing. Please help. The message supplied is: Installing package(s) into ‘C:/Users/Mike/Documents/R/win-library/2.15’ (as ‘lib’ is unspecified) * installing *source* package

When I try to install gsl in R I get the error Need GSL version >= 1.12 . However, I have version 2.3 of gsl installed on the system, which is picked up earlier in the configure process (see below). Is it possible for someone to fix this error in the configure script? checking for gsl-config... /lrz/sys/libraries/gsl/2.3/bin/gsl-config checking if GSL version >= 1.12... checking for gcc...

Dear R users: I have a problem when installing the R package *gsl*. The procedure is as follows: (1) Since it needs a GSL vesion >=1.12, and the GSL library on the serve I use is too old, I download GSL 1.15 and install it in my own account, such as $HOME/local/gsl. Because I do not have root access, so it cannot be installed in standard folder. (2) Then I download the source code of R

Following the recommendation of Prof. Ripley, I have created the Makevars file with the line: PKG_LIBS="-L/usr/lib/libm -lm -L/usr/local/lib/libgsl -lgsl -L/usr/local/lib /libgslcblas -lgslcblas" in the working directory. Now I have the code file Example3.c which computes the Bessel function value (the example is taken from the GSL reference book). I am running: R CMD SHLIB Example3.c

Hi, I am writing a function in C that is meant to be called by R. In the C function, I used a gsl function gsl_stats_mean. The code is as simple as below void gsl(double *m, int *dim){ int r, c; r = dim[0]; c = dim[1]; double mean = gsl_stats_mean(&m[0], 1, r); Rprintf("mean = %f\n", mean); } The C code is succesfully compiled and the output is as follows. $ R CMD SHLIB

Dear list R package "gsl" is now on CRAN. This is a wrapper for the special functions of the Gnu Scientific Library (GSL). Functions include elliptic integrals, Airy functions, hypergeometric functions, and so on. Most functions optionally return error estimates. This library is a little odd in that documentation is limited to a pointer to the GSL reference manual, and occasional

Dear list R package "gsl" is now on CRAN. This is a wrapper for the special functions of the Gnu Scientific Library (GSL). Functions include elliptic integrals, Airy functions, hypergeometric functions, and so on. Most functions optionally return error estimates. This library is a little odd in that documentation is limited to a pointer to the GSL reference manual, and occasional

Dear R-list, I want to use shared library of gsl in R(2.15.1) on unix .I have a makefile such as CC = gcc CFLAGS = -fPIC -O2 PKG_LIBS -lgsl -lgslcblas -lm -lpthread ? OBJS_SPB = calc_spb.o k.o dk.o ddk.o ? ? calc_spb.so : $(OBJS_SPB) ? ????? $(CC) -shared -o calc_spb.so $(LIBS) $(OBJS_SPB) ? clean : ????? rm -f ../*.o *.o ? clean.so: ????? rm -f *.so ? I use R CMD SHLIB calc_spb.c in terminal

Dear R-list people, I asked a similar question a few hours before. I will try to be more specific. We like to add the GSL library to the file SHLIB in order to make it possible to run the C code using GSL functions from R. We read that the path to the libgsl.a should be added to the line shlib_libadd=' ' in the file SHLIB but it does not work on our system. Dyn.load fails with error

Hello, I tried this posted on the R devel subforum but no help so far. Maybe the wider net will be fruitful. Probably a pretty simple issue. The short story goes, I'm writing C source code and compiling it in as *.dll in the windows terminal by R CMD SHLIB foo.c. It works, I'm on a 64-bit system. I have the lastest R 2.15.0 and Rtools, and I am using the gcc 4.6.3 compiler. However,

Hi, I'm trying to install the gsl wrapper source code (http://cran.r-project.org/src/contrib/gsl_1.9-8.tar.gz) on a Linux system (OpenSuse 11.1), but encountering the following problem. I've already installed 'gsl' version 1.14 (ftp://ftp.gnu.org/gnu/gsl/gsl-1.14.tar.gz) on the system. What's missing? Thanks a lot... > R CMD INSTALL gsl * installing to library

hello I maintain the gsl R package, and many users have recently reported that the package does not install from source under macosx 10.9 ("mavericks"). Users typically install the gnu GSL library and are able to compile and run a small "hello world" program which executes some of the Bessel functionality of the library; but under mavericks the configure script (which uses

Hi all, I am new to R and am writing after having contacted Robin Hankin, who maintains the R gsl wrapper. I am trying to use an AFNI (neuroimaging analysis) program that depends on the R gsl package. When I try to use the script I wrote, I get an error that led me to suspect the gsl package was a culprit. When I do library("gsl") within R, I get: Error in dyn.load(file, DLLpath

I have an upcoming JASA paper with an iid sampling algorithm for Bayesian Generalized Linear models (e.g., Logit, Poisson Regression, and Conditional Logit models with multivariate normal priors). At this point, I have implemented the algorithms in C and hope to make the functions and corresponding source code available through an R package. I have successfully created the code necessary to