similar to: Problem with types on 64-bit

Displaying 20 results from an estimated 3000 matches similar to: "Problem with types on 64-bit"

2007 Jul 23
1
CHAR(STRING_ELT( - OK but CHAR(asChar(STRING_ELT( - not, why?
Any idea why CHAR(asChar(STRING_ELT( produces NA whereas CHAR(STRING_ELT( gets a pointer to a string? It's generally expected that STRING_ELT should already be a character, but why the coercion does not work? Here is a simple example (consistent over R2.5.1-R2.6 rev 42284, I didn't check earlier versions, but it used to be different in 2.4): install.packages("inline")
2009 Dec 16
2
What is the fastest way to see what are in an RData file?
Currently, I load the RData file then ls() and str(). But loading the file takes too long if the file is big. Most of the time, I only interested what the variables are in the the file and the attributes of the variables (like if it is a data.frame, matrix, what are the colnames/rownames, etc.) I'm wondering if there is any facility in R to help me avoid loading the whole file.
2001 Dec 07
2
Memory problem
Dear all, I have written a little R program to convert images. See below. Within the loop over j (the filenames) memory consumption grows constantly. rm( ... ) inside the loop did not help. Memory does not grow if I remove the writeBin statements between the two #-------- marks. But obviously this is not solution I want... Thanks for any advice. Manfred Baumstark P.S. As I'm new to R:
2002 Oct 14
1
R 1.6.0 Solaris crash with xmalloc: out of virtual memory
[some de-capitalization of *SXP done manually by mailing list maintainer ; the originally was caught as potential spam. MM] I have a little R program that crashes with the message xmalloc: out of virtual memory The code has a repeat{} loop that watches the sizes of some files. When there's an increase it updates things by reading the last 65 lines of each file, doing some
2003 Dec 16
1
Memory issues in "aggregate" (PR#5829)
Full_Name: Ed Borasky Version: 1.8.1 OS: Windows XP Professional Submission from: (NULL) (208.252.96.195) R 1.8.1 seems to be running into a memory allocation problem in the "aggregate" function. I have a rather large dataset (14 columns by 223,000 rows -- almost 40 megabytes) and a script that performs some processing on it. The system is a 768 MB Pentium 4. Here's the console
2019 May 08
2
ALTREP: Design concept of alternative string
Hello from Bioconductor, I'm developing a package to share R objects across clusters using boost library. The concept is similar to mmap package: https://cran.r-project.org/web/packages/mmap/index.html . However, I have a problem when I was trying to write Dataptr_method for the alternative string. Based on my understanding, the return value of the Dataptr_method function should be a vector
2010 Mar 07
1
duplicate STRSXP : shallow copy ?
Hello, As this little program illustrates, duplicating a STRSXP does not seem deep enough. require( inline ) fx <- cfunction( signature( x = "character"), ' SEXP y = PROTECT( duplicate( x ) ); int n = LENGTH(x); int nc = 0 ; char* p = 0 ; for( int i=0; i<n; i++){ p = (char*)( CHAR( STRING_ELT( y , i ) ) ); nc = strlen( p ) ; for( int j=0; j<nc; j++){ p[j] =
2019 May 10
2
ALTREP: Design concept of alternative string
Hi Gabriel, Thanks for your explanation, I totally understand that it is almost impossible to change the data structure of STRSXP. However, what I'm proposing is not about changing the internal representation, but rather about how we design and use the ALTREP API. I might do not state the workarounds clearly as English is not my first language. Please let me explain them again in detail.
2010 Nov 15
1
SEXP and slots
Hello, Since people have whisperred about Rcpp, I'd like to play too. > On 11/15/2010 07:45 AM, Patrick Leyshock wrote: >> Very helpful, thank you. >> >> A couple other questions, please: >> >> 1. I've got a function written in C, named "my_c_function". In my R >> code I call this function, passing to it an INTSXP and a STRSXP, >>
2010 Jun 19
1
more powerful iconv
R community, As you may know, R's iconv doesn't work well converting to and from encodings that allow embedded nulls. For example > iconv("foo", to="UTF-16") Error in iconv("foo", to = "UTF-16") : embedded nul in string: '\xff\xfef\0o\0o\0' However, I don't believe embedded nulls are at issue here, but rather that R's iconv
2013 Jun 27
3
Read a text file into R with .Call()
Hi, I want to read a text file into R with .Call(). So I define some NEW_CHARACTER() to store the chracters read and use SET_STRING_ELT to fill the elements. e.g. PROTECT(qNames = NEW_CHARACTER(10000)); char *foo; // This foo holds the string I want. while(foo = readLine(FN)){ SET_STRING_ELT(qNames, i, mkChar(foo))); } In this way, I can get the desired character from qNames. The only problem
2007 Sep 20
1
copying promise
1. Is there some way to copy a promise so that the copy has the same expression in its promise as the original. In the following we y is a promise that we want to copy to z. We want z to be a promise based on the expression x since y is a promise based on the expression x. Thus the answer to the code below is desired to be z=2 but its 1, 1 and y in the next three examples so they are not the
2009 Sep 03
1
Running an expression 1MN times using embedded R
Hello, I'm evaluating this expression expression({ for(x in 1:5){ .Call('rh_status','x') }}) a million times from a program with R embedded in it. I have attached reproducible code that crashes with Program received signal SIGSEGV, Segmentation fault. 0x00002b499ca40a6e in R_gc_internal (size_needed=0) at memory.c:1309 1309 FORWARD_NODE(R_PPStack[i]); Current language:
2005 Jan 03
2
Memory problem ... Again
Happy new year to all; A few days ago, I posted similar problem. At that time, I found out that our R program had been 32-bit compiled, not 64-bit compiled. So the R program has been re-installed in 64-bit and run the same job, reading in 150 Affymetrix U133A v2 CEL files and perform dChip processing. However, the memory problem happened again. Since the amount of physical memory is 64GB, I think
2005 Jul 15
3
Passing character strings from C code to R
Hi, I have a C code which produces array of integers and potentially a string, and I have problems passing the string out. Here is the relevant part of the code: 1 PROTECT(Ret = allocVector(INTSXP, n)); 2 ret = (int*) INTEGER(Ret); /* get pointer to R's Ret */ 3 for(i=0; i<n; i++) ret[i] = data[i]; 4 Free(data); 5 i=1; 6 if (comment) { // comment was found 7 n
2005 Jul 15
3
Passing character strings from C code to R
Hi, I have a C code which produces array of integers and potentially a string, and I have problems passing the string out. Here is the relevant part of the code: 1 PROTECT(Ret = allocVector(INTSXP, n)); 2 ret = (int*) INTEGER(Ret); /* get pointer to R's Ret */ 3 for(i=0; i<n; i++) ret[i] = data[i]; 4 Free(data); 5 i=1; 6 if (comment) { // comment was found 7 n
2006 Nov 17
2
Data table in C
After getting one list done, I am now struggling to form a data frame in C. I tried to do a list of lists which gives me : $<NA> $<NA>[[1]] [1] "BID" $<NA>[[2]] [1] 0.6718 $<NA>[[3]] [1] 3e+06 $<NA> $<NA>[[1]] [1] "BID" $<NA>[[2]] [1] 0.6717 $<NA>[[3]] [1] 5e+06 $<NA> $<NA>[[1]] [1] "BID"
2007 Apr 08
1
buglet in terms calculations
Hi, Vince and I have noticed a problem with non-syntactic names in data frames and some modeling code (but not all modeling code). The following, while almost surely as documented could be a bit more helpful: m = matrix(rnorm(100), nc=10) colnames(m) = paste(1:10, letters[1:10], sep="_") d = data.frame(m, check.names=FALSE) f = formula(`1_a` ~ ., data=d) tm =
2019 Jul 17
2
ALTREP wrappers and factors
Hello, I?m experimenting with ALTREP and was wondering if there is a preferred way to create an ALTREP wrapper vector without using .Internal(wrap_meta(?)), which R CMD check doesn?t like since it uses an .Internal() function. I was trying to create a factor that used an ALTREP integer, but attempting to set the class and levels attributes always ended up duplicating and materializing the
2004 Dec 28
2
Configuration of memory usage
Hi, all; I know there has been a lot of discussions on memory usage in R. However, I have some odd situation here. Basically, I have a rare opportunity to run R in a system with 64GB memory without any limit on memory usage for any person or process. However, I encountered the memory problem error message like this: Error: cannot allocate vector of size 594075 Kb I got this error message while