similar to: can't compile on OSX: unsetenv header issues

Hello, I am working on an unix SunOS machine ( sun4u sparc) and since the last release of R -R version 2.5.0 (2007-04-23) - , I have got troubles during the execution of batch command. For example with the instruction file multic.in >cat multic.in install.packages("multic","/bge/penel/R_install/R_2.5.0/lib/R/library",repos="http://cran.at.r-project.org")

I've used that patch to close the hole. This patch is temporary and doesn't fix real trouble maker - problem in new version in getenv() (after 6.3 it got changed to something monstrous and non-working right if environment has only one variable), hope it will get fixed soon. *** rtld.c.orig Tue Dec 1 16:55:13 2009 --- rtld.c Tue Dec 1 16:55:55 2009 *************** *** 357,374 ****

The version of R on our unix system has been updated to version 2.5.0. When I type the following command at the unix prompt: 'R CMD BATCH filename' I receive the following error message: Error in Sys.unsetenv("R_BATCH") : 'Sys.unsetenv' is not available on this system Execution halted. 'R CMD BATCH filename' used to work with the prior version of R that I

Hello all, After reading through the Wiki and archives, I decided to take a stab at installing * on Solaris 9 SPARC. I checked it out via CVS last night as well as about an hour ago, and have run into a compile problem that I can't quite figure out. After running into some unlisted dependencies, such as popt, things are almost compiling. Right now the make bombs when trying to find setenv

Is there a way to rename a function when importing it? I want to say, "import yourFunc from Foo as myFunc" in the NAMESPACE file. Does this exist and I've missed it? If it doesn't exist, would others think it useful (and possible)? Best, + seth

Hi all, One of the things I find most problematic in R is the partial matching of names in lists. Robert and I have discussed this and we believe that having a mechanism that does not do partial matching would be of significant benefit to R programmers. To that end, I have written a patch that modifies the behavior of "[[" as follows: 1. [[ gains an 'exact' argument with

I'm looking for ideas for creating high-quality plots for use in projected presentations (powerpoint, etc) --- ideally high-quality png, jpg, bmp. The graphics produced using the postscript device look very good. Those generated with win.graph(), png are plagued by the jaggy lines. So far, the only way I can use the postscript plots in my presentations is using separate screen capture

Hi folks, Ubuntu 10.04 64 bit Where can I find 64 bit RSQLite? It seems not there; RSQLite: SQLite interface for R http://cran.r-project.org/web/packages/RSQLite/index.html TIA B.R. Stephen L

Hi, I have a S3 package with namespace called "myS3Pkg". Inside my package I would like to create a S4 class which extends (adds 2 slots) another S4 class from some other package. The class should be created in "myPkg" environment (and not global environment). Using: setClass("myS4class", representation("otherS4class", mydata = "numeric"),

Hi all, The dict package provides a dictionary (hashtable) data structure much like R's built-in environment objects, but with the following differences: - The Dict class can be subclassed. - Four different hashing functions are implemented and the user can specify which to use when creating an instance. I'm sending this here as opposed to R-packages because this package will

RDieHarder fails its regression tests on x86_64 (aka "amd64") at CRAN (using Debian), and I see the same on Ubuntu 8.10 in 64 bit. No issues on 32bit. One odd thing is that the program behaves well if run via R --no-save < tests/RDieHarder.R but NOT when started using R --slave < tests/RDieHarder.R as R CMD check does. So I tried different things related to startup

http://bugzilla.mindrot.org/show_bug.cgi?id=757 Summary: KRB5CCNAME inherited from root's environment under AIX Product: Portable OpenSSH Version: -current Platform: PPC OS/Version: AIX Status: NEW Severity: minor Priority: P2 Component: sshd AssignedTo: openssh-bugs at mindrot.org

I've been experimenting with install.packages and it's new ability to track down dependencies from a list of repositories and encountered this: install.packages(c("foo", "bar"), repos="http://cran.r-project.org", dependencies=c("Depends", "Suggests")) dependencies 'foo' are not availabledependencies 'bar'

Hi, namespaceImportFrom in base/R/namespace.R has the following: fdef <- methods:::getGeneric(genName, impenv) The definition of getGeneric is in methods/R/RMethodUtils.R starts with: getGeneric <- ## return the definition of the function named f as a generic. ## ## If there is no definition, throws an error or returns ## NULL according to the value of

Should functions or the user be responsible for coercing an S4 object argument containing the proper object (and thus should below be considered a bug in the packages or not)? The example is with RSQLite but the same thing happens with RMySQL, and other DBI packages. > library("RSQLite") Loading required package: DBI > m <- dbDriver("SQLite") > con <-

Hello all, I've had the following apropos alternative in my ~/.Rprofile for some time, and have found it more useful than the current version. Basically, my version ignores case when searching. If others find this useful, perhaps apropos could be suitably patched (and I'd be willing to create such a patch). + seth Here is my version of apropos: APROPOS <- function (what, where =

Seth, I encountered problems installing RSQLite, R-2.7.0, on RHEL4 using Intel 10.1 icc, My sysadmin helped me track down the problem and kindly forwarded me the fix, which corrected the problem. What follows is from the sysadmin. Mark I looked at the error, looks like there is a bug in the source code. I've attached a new tarball, hopefully fixed. I added #include <sys/types.h>

promptClass fails to identify methods associated with the class. Here is a fix: Index: promptClass.R =================================================================== --- promptClass.R (revision 41719) +++ promptClass.R (working copy) @@ -165,7 +165,7 @@ if (nmeths > 0) { .meths.body <- " \\describe{" for (i in 1:nmeths) { - .sigmat

Hi, after updating R 2.5.0 devel yesterday we today observed many new unexpected failures in our daily package build and test system runs, which can be traced to recent changes in the implementation in try() (as noted in NEWS). Investigating this new implementation I come across an issue in conjuntion with using S4 classes and methods. try(expr) does not return an object with attribute

Hi, I would be nice if names() returned the equivalent of ls() for environments. --- a/src/main/attrib.c +++ b/src/main/attrib.c @@ -687,6 +687,8 @@ SEXP attribute_hidden do_names(SEXP call s = CAR(args); if (isVector(s) || isList(s) || isLanguage(s)) return getAttrib(s, R_NamesSymbol); + if (isEnvironment(s)) + return R_lsInternal(s, 0); return R_NilValue; }