similar to: Installation fails on FreeBSD (PR#9293)

Full_Name: rodney sparapani Version: 1.9.0 OS: Solaris 9 Submission from: (NULL) (141.106.120.97) I'm following the instructions for the Sun Forte compiler. I had success with 1.8.1 so I think the compiler settings are correct (config.site): CC="cc -xarch=v8plusa" CFLAGS="-xO5 -xlibmil -dalign" F77="f95 -xarch=v8plusa" FFLAGS="-xO5

I would appreciate getting a clarification of /usr/lib/R/library vs /usr/local/lib/R/site-library. I am running R 1.8 on Debian Linux. On one occasion doing update.packages() resulted in versions of one or more libraries being placed in one of these directories without removing the old version, and the old version took precedence over the new. I'm sorry I did not save the steps I used. I

Dear Developers, Since 2.8, R installation has got a bug in it such that if a package has a "configure" file then it cannot be installed without modification. For example: * Installing *source* package 'foreign' ... ERROR: 'configure' exists but is not executable -- see the 'R Installation and Adminstration Manual' * Removing

Hi folks, I'm having a problem with installing R on Solaris. Has anyone seen a similar issue? I don't find any hits on the search engines. Thanks. Environment: SunOS xxxx 5.10 Generic_118822-25 sun4u sparc SUNW,Sun-Fire-280R During the installation/compilation of R-2.10.1 I get the following error: begin installing recommended package boot ERROR: cannot extract package from

Hi everyone, I’ve recently added a private library as a way to manage my R libraries. And I did this by simply copying my old library to a new folder and then linking this to R by setting my R_LIBS environmental variable in .Renviron. However I have run into a problem. When I update my packages it is not updating those that are current in the base R library. This means I can’t load

I'm trying to install R-2.0.1 on Solaris 9 and I'm receiving the following error messages during make. begin installing recommended package foreign make[2]: *** [foreign.ts] Error 1 make[2]: Leaving directory `/opt/net/source/R-2.0.1/src/library/Recommended' make[1]: *** [recommended-packages] Error 2 make[1]: Leaving directory

Doing help("R_LIBS") brings up a help file (the same one as help(library)), but the help file doesn't mention R_LIBS. It does have a link to .libPaths, which does document R_LIBS. The quickest fix would be for help("R_LIBS") to bring up the .libPaths help file. --please do not edit the information below-- Version: platform = i386-pc-mingw32 arch = i386 os = mingw32

Full_Name: Larry Layne Version: 2.4.0 OS: MS Windows 2000 Submission from: (NULL) (129.24.91.249) All of the following libraries loaded just fine in version 2.3.1: > utils:::menuInstallLocal() package 'tripack' successfully unpacked and MD5 sums checked updating HTML package descriptions > library(tripack) Error in dyn.load(x, as.logical(local), as.logical(now)) : unable

Hello, I am new in R I try to build R on CentOS 64bit. *./configure --prefix=$HOME/soft *executed without any errors. But make command print that error: * DONE (codetools) begin installing recommended package foreign * installing *source* package ‘foreign’ ... sh: ./configure: /bin/sh: bad interpreter: Permission denied ERROR: configuration failed for package ‘foreign’ * removing

Full_Name: Vilmos Prokaj Version: 2.5.1 OS: windows Submission from: (NULL) (81.183.3.216) I'm not sure that this is really a bug, if not I do not understand why should it be in this way. Most of the scripts used to build and install new packages calls the R program with the --slave --vanilla command line options. In the INSTALL script however we can find the following lines

I am trying to install R1.8. When I use "make" to build R, it gives me following error, * Installing *source* package 'foreign' ... /usr/local/bin/R-1.8.1/bin/INSTALL: ./configure: /bin/sh: bad interpreter: Permission denied ERROR: configuration failed for package 'foreign' ** Removing '/usr/local/bin/R-1.8.1/library/foreign' make[2]: *** [foreign.ts] Error 1

Hi, I have the following linear mixed model: y(g,i,j,k,l)=u + L(g) + T(i) + D(j) + S(k) + (TS)(i,k) + error(g,i,j,k,l) where S(k) and the combined effect (TS)(i,k) are random effects whereas the rest are fixed effects. How do I specifiy the random part of the model formula in lme(), especially concerning the combined effect (TS)? Moreover, when I run the model as a fixed effect model I get

I have a compilation problem on FC2, 2xXeon box. The following dialogue output from the end of the compilation illustrates: [very large snipping sound ...] * DONE (cluster) begin installing recommended package foreign make[2]: *** [foreign.ts] Error 1 make[2]: Leaving directory `/usr/src/redhat/SOURCES/R-2.0.1/src/library/Recommended' make[1]: *** [recommended-packages] Error 2 make[1]:

Dear R user, I try to build R-2.8.1 on SunOS 5.9, and use following command: CC="cc -xarch=v9" CFLAGS="-xO5 -xlibmil -dalign" F77="f95 -xarch=v9" FFLAGS="-xO5 -xlibmil -dalign" CXX="CC -xarch=v9" CXXFLAGS="-xO5 -xlibmil -dalign" FC="f95 -xarch=v9" FCFLAGS="-xO5 -xlibmil

Good day, I believe from the documentation that folders in R_LIBS should appear in the output of .libPaths, but they do not. The documentation contains "The library search path is initialized at startup from the environment variable R_LIBS ..." However, $ export R_LIBS=/users/stgrad/dario/tmp/ $ Rscript -e ".libPaths()" [1] "/dskh/nobackup/biostat/Bioconductor"

Brian Yandell <byandell@wisc.edu> writes: > Folks, > I am working on a Windows system which is part of the UW-Madison > statistics LAN. R is maintained on a file system to which I cannot write. > I tried installing a package and got the following interplay: Set the lib argument to install.packages to a directory in which you do have write permissions. From ?install.packages

I am fairly new at using R/programming in general so I apologize if I am leaving crucial parts of the puzzle out, but here goes. First and foremost this is the error I am receiving: Error in muPriors[priors[, 1:2]] <- priors[, 3] : NAs are not allowed in subscripted assignments This occurs only when I am using observational priors and some number of nominal variables, it does not

Full_Name: David Firth Version: 2.0.0 OS: Mac OS 10.3.5 Submission from: (NULL) (81.178.234.156) When running R in R Cocoa GUI 1.0 (v2004-10-14), I have > Sys.getenv()[["R_LIBS"]] [1] "/Users/david/Library/R" > .libPaths() [1] "/Users/david/Library/R/library" [2] "/Library/Frameworks/R.framework/Resources/library" The pasting of

This is something that I have not seen in earlier beta versions of 1.6.0: . . . ts.plot text html latex example ts.union text html latex example tsSmooth text html latex tsdiag text html latex example R_LIBS= ../../../bin/R CMD INSTALL ERROR: no packages

Dear R-helpers, for the first time since R-0.6x I have to face installation problem. I switched to a new Linux-box (SuSE 9.0) and installed as many libraries as possible. R-1.9.0.tgz went to /usr/local/lib and was extracted without problems. After running properly for a while, 'configure' (called without any switches) gave "configure: creating ./config.status" which was