Displaying 20 results from an estimated 500 matches similar to: "Building R-2.3.1 for Windows with ATLAS"
2006 Sep 26
1
Building R for Windows with ATLAS
I think this is not a R-devel question. Sorry to all if I'm wrong,
please let me know.
I managed to build R successfully with the default BLAS but when I
change the MKRULES to use ATLAS BLAS and set the path to
"C:/cygwin/home/Administrador/ATLAS/lib/WinNT_ATHLONSSE2" I got the
following error message (I'm posting only the final part, there was a
lot of compilation before this):
2006 Jan 13
1
Problems installing R 2.2.1
We are trying to install R2.2.1 on a IBM P655 Cluster, SuSE LE 9.1
We are using gcc v 3.3.3
and we are getting this error on make
g77 -fPIC -g -O2 -ffloat-store -c dlamc.f -o dlamc.lo
g77 -fPIC -g -O2 -c dlapack0.f -o dlapack0.lo
g77 -fPIC -g -O2 -c dlapack1.f -o dlapack1.lo
g77 -fPIC -g -O2 -c dlapack2.f -o dlapack2.lo
g77 -fPIC -g -O2 -c dlapack3.f -o dlapack3.lo
g77 -fPIC -g
2012 May 09
2
R Installation Manual - ATLAS BLAS guidance that is not in the current version
Good afternoon.
I am trying to compile a version of Rblas.dll based on ATLAS for the Corei7. I had remembered that there was mention of which file to adjust and that "xerbla" needed to be removed from one of the outputs from the last time I tried a few years ago. The most recent version of the R Installation manual does not say anything about this. An older version (2.10 I believe) has
2004 Feb 26
2
ATLAS threaded 64 bit (Opteron) - need *.so?
Using ATLAS with R is an old topic quite covered in the "R
Administration" manual (and by R's "configure" script
collection).
I still do not easily manage to build R properly on our new AMD
Opteron (2-processor).
I did work with the current Atlas 3.6.0, configured manually
(but "express" version) to build a threaded ATLAS version, and
successfully ran Atlas'
2006 May 18
1
Stuck in R installation, help~~
Hi all,
I'm stuck in the installation of R.
When I run configure, I got the error:
configure: error: --with-readline=yes (default) and headers/libs are
not available
I followed one answer in some post and use this:
./configure --with-prefix=/home/user/R-2.2.1 --with-readline=no
It successfully configured but I encountered another problem while make:
gcc -shared -L/usr/local/lib64 -o
2006 May 03
1
Installation problem
I am trying to install R-2.3.0 on a 64bit linux box and encounter
several error during the make step. I'd appreciate any help. Error
messages follow:
[root at calculon R-2.3.0]# make
make[4]: Entering directory
`/state/partition1/apps/packages/R-2.3.0/src/modules/lapack'
gcc -shared -L/usr/local/lib64 -o libRlapack.so dlamc.o dlapack0.o
dlapack1.o dlapack2.o dlapack3.o cmplx.o
2005 Aug 29
1
BLAS and ATLAS
On Mon, Aug 29, 2005 at 11:48:23AM +0100, Prof Brian Ripley wrote:
> On Mon, 29 Aug 2005, G?ran Brostr?m wrote:
> >LAPACK/BLAS routines call xerbla "if an input parameter has an
> >invalid value" (exact quote from XERBLA at Netlib). Other types of errors
> >are not printed (by xerbla), but it is up to the user to check the return
> >value of the argument
2005 Sep 02
0
Build R with ATLAS
Hi,
I followed this message,
https://stat.ethz.ch/pipermail/r-devel/2004-February/028942.html, to
compile ATLAS with gcc and g77 on AMD Opteron. I then followed the
instructions on this message,
https://stat.ethz.ch/pipermail/r-devel/2004-February/028966.html, to
convert static libraries to dynamic libraries.
However, when I tried to configure R-devel, I got the following error
2005 Aug 28
2
xerbla called from BLAS routine (PR#8100)
Full_Name: G?ran Brostr?m
Version: R-2.1.1, 2.2.0
OS: Debian unstable
Submission from: (NULL) (213.65.9.59)
Some BLAS routines call xerbla for error messages, which results in a message
like
"LAPACK routine DGER gave error code -9".
Suggested solution: In
void F77_NAME(xerbla)(char *srname, int *info)
{
/* srname is not null-terminated. It should be 6 characters. */
char
2010 May 14
1
Compiling R with ATLAS
Hello. I know almost nothing about Linux, so I apologize if the answer to
this is obvious.
I am trying to compile R with ATLAS (successfully compiled 3.9.24 on Ubuntu
10.04 64 bit). I configured with:
./configure --enable-R-shlib --enable-BLAS-shlib
--with-blas="-L/usr/local/atlas/lib -lf77blas -latlas"
--with-lapack="-L/usr/local/atlaslib -llapack -lcblas" --with-x
and I
2010 May 14
1
Compiling R with ATLAS
Hello. I know almost nothing about Linux, so I apologize if the answer to
this is obvious.
I am trying to compile R with ATLAS (successfully compiled 3.9.24 on Ubuntu
10.04 64 bit). I configured with:
./configure --enable-R-shlib --enable-BLAS-shlib
--with-blas="-L/usr/local/atlas/lib -lf77blas -latlas"
--with-lapack="-L/usr/local/atlaslib -llapack -lcblas" --with-x
and I
2019 Apr 24
2
R problems with lapack with gfortran
Hi,
I have tried to pinpoint potential problems which could lead to the
LAPACK issues that are currently seen in R. I built the current R
trunk using
AR=gcc-ar RANLIB=gcc-ranlib ./configure --prefix=$HOME --enable-lto
--enable-BLAS-shlib=no --without-recommended-packages
and used this to find problem areas.
There are quite a few warnings that were flagged, due to mismatches
in function
2010 May 28
2
Compiling R-2.11.0 with ATLAS-tuned BLAS and LAPACK
Hello. I am a Linux neophyte and know almost nothing ?about compiling,
so I would appreciate any help and advice y'all would care to offer.
I am trying to compile the 64 bit version of R using a tuned ATLAS and
LAPACK (ATLAS 3.9.24). I am running Ubunto 10.04 LTS (through wubi,
FWIW). The ATLAS and LAPACK files (atlas.so, f77blas.so, lapack.so,
and cblas.so) are sitting in the folder
2001 Jan 26
2
Debian install : libf77blas.so missing
Hi,
I tried installing R on my system (Debian Linux 2.2.17, i386).
I find that libf77blas.so is missing. Can someone tell me where
and how I can find this? A search in debian.org didnt turn up anything.
Anyway help will be greatly appreciated.
Thanks,
Anand
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2002 Dec 26
3
R-1.6.2beta_2002-12-20: build problems (PR#2395)
While builds and validations of R-1.6.2beta_2002-12-20 were
successful on several systems, there were a few failures:
------------------------------------------------------------------------
Apple Darwin 6.2 (MacOS 10.2.2) with gcc-3.2.1:
gcc -dynamiclib -flat_namespace -undefined suppress -o
.libs/libgslcblas.0.0.0.dylib sasum.lo saxpy.lo ... isamax.lo izamax.lo xerbla.lo -lc -install_name
2010 Nov 13
1
LAPACK lib problem, lme4, lastest R, Linux
I just dumped Vista off a laptop and installed Ubuntu 10.10 (latest
release) as the single operating system. I did all of the updates and
then installed emacs and ess. Next I installed R by following the the
usual instructions on the CRAN site. At this point all is working I am
now in the process of installing the packages that I normally have
installed. I am having a problem with the LAPACK
2010 Nov 14
3
LAPACK libraries improperly linked
I am not sure if this is an R development problem or not. I am starting
with completely clean OS and and installing the latest version of R
without trying to anything special but I am having trouble with the
LAPACK library linking when I try to build packages that require them.
I thought perhaps my problem may be if interest here.
I just dumped Vista off a laptop formatted the disk and
2011 Jan 28
2
R CMD INSTALL cannot find libf77blas
I feel like Marlon Brando in "On the Waterfront" where he's told "It's
not your night, kid", except for me it has been the last two months
trying to debug memory problems. Now I can't even install an old
version of this package on a netbook running the Ubuntu 10.10 netbook
remix because it can't find the libraries libf77blas and libatlas.
I have even gone to
2001 Jul 30
3
ATLAS
I thought I would try compiling R this time with the ATLAS libraries.
I have compiled ATLAS and I have the following libraries:
libatlas.a libf77blas.a libptcblas.a libtstatlas.a
libcblas.a liblapack.a libptf77blas.a
Is it sufficient to use ' --with-blas=libatlas.a ' when configuring or
do I need to specify any of the other libraries as well?
--
William D. McCoy
2009 Jan 13
2
Using fortran code which call LAPACK subroutines
Hello
I'm trying to run a fortran code which use LAPACK subroutines. I think I
should use some points shown in the manual 5.5 Creating shared objects
but it is too technical for me :-(... Could anyone help me for the
procedure to do:
-which part of the manual is relevant for this type of question?
actually I'm speaking from writing R extensions, should I read R admin?
-point 1.2