similar to: Installation, permissions of /usr/local/lib/R (PR#9054)

Dear list, I may have found a bug in model.frame.default (called by the lm function). The problem arises in my R dev version but not in my R 2.4.0. Here is my config : > version _ platform x86_64-unknown-linux-gnu arch x86_64

I got very strange behavior: Server A has local passwords (made with smbpasswd -a) and it also use password from other server: security = server password server = b.domain.example passdb backend = tdbsam With OLDER user accounts everything works. With WIN-XP everything works. With CMD-PROMPT everything works. With LOCAL PASSWORDS everything works. With PERMISSIONS TO GROUP everything

I just tested our backup system, that is done with rsync. When I changed metadata of file --- for example permissions --- rsync notices change and copies permissions to backup. However, our archiving does not work. So I can roll back to older contents of a file but not to older permissions, owner/group information etc. Several web pages claim that rsync does not detect metadata changes at

I'm trying to install R under Ubuntu 7.10 (gutsy; Linux 2.6.22-15-generic x86_64). Following the instructions at http://cran.r-project.org/bin/linux/ubuntu/README, I installed r-base, r-base-core, and r-base-dev without any problems. When I open R, however, I get the message "Can't open /usr/lib64/R/etc/ldpaths". That file is linked to /etc/R/ldpaths, which doesn't exist

On Thu, 21 Apr 2016 08:23:32 +0000 Martyn Plummer <plummerm at iarc.fr> wrote: > From: Martyn Plummer <plummerm at iarc.fr> > To: "cireyapmin at gmail.com" <cireyapmin at gmail.com>, > "r-sig-fedora at r-project.org" <r-sig-fedora at r-project.org> Subject: > Re: [R-sig-Fedora] Cannot Run On The Command Line Date: Thu, 21 Apr > 2016

Hi I'm trying to install R on Ubuntu 11.10 and it seems to install fine with both apt-get and dpkg but always when I start R I get jt42@bioinf4:~# R /usr/local/bin/R: line 237: /usr/lib/R/etc/ldpaths: No such file or directory R version 2.14.0 (2011-10-31) Copyright (C) 2011 The R Foundation for Statistical Computing ISBN 3-900051-07-0 Platform:

I've just installed r-base (several times!) using the instructions at http://cran.us.r-project.org/bin/linux/ubuntu/ and for some reason it is not creating a /etc/R/ldpaths file. I've tried a few times, tried purging, and removing everything in /etc/R and /usr/lib/R as suggested by Dirk, and reinstalling but still get $ R /usr/bin/R: line 236: /usr/lib/R/etc/ldpaths: No such file

I get tables with millions of rows. For plotting to a screen-size jpg, obviously just about 1000 points are enough. Instead of feeding plot() the original millions of rows, I'd rather shrink the original dataframe, using some kind of the following interpolation: -- split dataframe into chunks of N rows each, e.g. 1000 rows each -- compute average for each column -- issue one new row

Hi Everybody, I made R (v. 2.11.1) from source with the following config option: ./configure --prefix=/mnt/ami-centos5.5-64bit-base \ --exec-prefix=/mnt/ami-centos5.5-64bit-base \ --with-tcltk All seemed to go well, but when I tested it with: /usr/sbin/chroot /mnt/ami-centos5.5-64bit-base R It told me: /bin/R: line 217:

Dear all, (Mac OS X 10.4.11, R 2.6.0) I have a quantitative dataset with a lot of Na?s in it. So many, that it is not possible to delete all rows with NA?s and also not possible, to delete all variables with NA?s. Is there a function for a principal component analysis, that can deal with so many NA?s. Thanks in advance Birgit Birgit Lemcke Institut f?r Systematische Botanik

Dear all, It is my understanding that using 'importFrom' in the NAMESPACE of a package allows to avoid conflicts between different packages defining objects with identical names. However, I can still see conflicts while loading the package using 'library'. Here is a toy example, with a package 'foo' importing 'as.igraph' from the igraph package, and 'nj'

Hi, I am a new student to R and I was hoping someone could help me with the error message I keep getting when I try to use the nb2listw() function. I have 45 sites and I want to get an autocorrelation value for sites within 1000m of each other. coords<-cbind(EAST,NORTH) coords<-as.matrix(coords) nb1000<-dnearneigh(coords,0,1000,longlat=TRUE) then when I try to run the

Hi everyone, I have a matrix that contains 1000 replicates of a sample of a list of values. I want to group each row (row=replicate) into my defined bin ranges and then calculate the mean and stdev for each of the bin ranges (so I will have 1000 rows but ncol=number of bin ranges). I don't know how to group rows in a matrix matrix according to another vector (which is what I think I need to

Dear R user, I am using Sweave to write my reports with R code. Unlucly my code take a lot of time to run, and I don't want to run it multiple time, if possible, as I am still developping the tools. It seems that a sweave run does not save the enviroment at the end of the process, is there a way to avoid to lunch multiple time the same commands? maybe it could be possible to store chunck of

Hi the list, I am defining a new class MyClass. Shortly, I will submit a package with it. Before, I would like to know if there is a kind of "non official list" of what method a new S4 object have. More precisely, personnaly, I use 'print', 'summary' and 'plot' a lot. So for my new class, I define these 3 methods. Is there some other method that a R user can

Hi Everyone, I am doing a project based on "Spatially Lagged Predictor Variable Models", I would like to know which package in R would execute this model. Also, I am new to this field of spatial statistics. Any suggestions for a good book on spatial regression analysis would be appreciated. Thanks Again. Cheers Arun -- View this message in context:

Dear R community, I'm working with PCA and CCA methods, and I have a theoretical question. Why is it necesary to have more temporal values than variables when the CCA O PCA are going to be used? Could you advise to me some any paper about it? Thanks in advance, [[alternative HTML version deleted]]

Hello list, does anyone know if Monmonier algorithm is available in R? I've checked several spatial libraries, but I didn't find anything related to it. However, there is a huge documentation and I may have missed it. Before coding it, I'd like to be sure it doesn't already exist. Cheers, Thibaut Jombart. -- ###################################### Thibaut JOMBART CNRS UMR

Dear all, I'm using the package adehabitat in R to import several .asc files (=matrix), and also create a kasc object (=dataframe) with all of them. The main idea is to use this kasc object to map the predicted values of climate-matching model for an overall area. However, I don't know how to proceed: Do I have to project the model (already stored in R) onto the kasc object directly, or

hi, if I have 20 x 3 data.frame, how to split it into 10 x 6 (moving the lower part of 10x3 to column) or 5 x 12 thanks -- Weiwei Shi, Ph.D Research Scientist GeneGO, Inc. "Did you always know?" "No, I did not. But I believed..." ---Matrix III