similar to: R CMD build says, 'Can't call method "print"'

Hi all, I'm trying to build from source on Linux and getting the following error when it tries to build the help for 'nlme': <snip> ranef.lme text html latex example reStruct text html latex example /home/sfalcon/sw/R-related/R-1.8.1/bin/INSTALL: line 1: 8133 Segmentation fault ${R_CMD} perl

Hi, Using latest R 2.5.0 Patched, I'm unable to install the Matrix package from cran.fhcrc.org. I get: Creating a new generic function for "isSymmetric" in "Matrix" Creating a new generic function for "unname" in "Matrix" Error in conformMethod(signature, mnames, fnames, f) : In method for function "!": formal arguments omitted in

promptClass fails to identify methods associated with the class. Here is a fix: Index: promptClass.R =================================================================== --- promptClass.R (revision 41719) +++ promptClass.R (working copy) @@ -165,7 +165,7 @@ if (nmeths > 0) { .meths.body <- " \\describe{" for (i in 1:nmeths) { - .sigmat

I'm seeing errors with R CMD check that I don't understand when checking a package that uses a NAMESPACE file with an import directive. The imported package is listed in the DESCRIPTION file in the Imports field. DESCRIPTION contains: Imports: arules NAMESPACE contains: import(arules) The package builds without warnings and installs and loads just fine. But check has this to

I have been using Ubuntu 12.04 for awhile and built samba from source. I have two servers, both on 12.04. Samba bulid 4.1.11. I would like to upgrade the servers to 14.04 and start using the actual pacakges from ubuntu. How do I get from compiled binarys to using the ubuntu pacakge? Thanks for any help. Jason

I think Rscript has a problem running files that have mac encodings for newline (^M rather than ^J on linux). If I source the file within R, it works okay: > source('j.R') [1] "MEA_data/sernagor_new/CRX_P7_1.txt" But if I run the file using Rscript on a linux box I get a strange error message: $ Rscript --vanilla j.R " Execution halted The example script j.R is at

Right, my understanding is that files that specifically need CRLF should say so via .gitattributes somewhere. autocrlf=false ought to work if your Windows editor doesn’t (or can be persuaded not to) introduce CRLFs. I’ve observed that the Visual Studio editor will detect the line-ending style of the file you’re editing, and imitate it. This works great until you create a new file. 😝 So I’ve

I understand about using the newer binaries, but what I really want to "save" is the active directory. Sorry I should have been clear. I do not want to have to rejoin/recreate everything. Thanks. Jason On Mon, Jun 29, 2015 at 10:23 AM, Reindl Harald <h.reindl at thelounge.net> wrote: > > Am 29.06.2015 um 15:06 schrieb Jason Waters: > >> I have been using Ubuntu

I'm looking for ideas for creating high-quality plots for use in projected presentations (powerpoint, etc) --- ideally high-quality png, jpg, bmp. The graphics produced using the postscript device look very good. Those generated with win.graph(), png are plagued by the jaggy lines. So far, the only way I can use the postscript plots in my presentations is using separate screen capture

Hello. I have a computer running Redhat 7.2 and the Wine pacakge. This computer has no Windows partitions on it. From what I've read it's easier to get programs to run under Wine if you have a Windows partition. I really don't want one because it only has 4 gigs of hard drive space in the computer and I only use if for Linux. Has anybody tried to do this before? Any info would be

The submission guide has the following cryptic (to me) sentence: ?? "Reasonable compression should be used for data (not just .rda files) " The survival pacakge has a fairly large number of data files --- exactly what should I be doing??? xz compression? Terry T.

Hello! I am running principle components analysis using princomp function in pacakge psych. mypc <- princomp(mydataforpc, cor=TRUE) Question: I'd like to use pairwise deletion of missing cases when correlations are calculated. I.e., I'd like to have a correlation between any 2 variables to be based on all cases that have valid values on both variables. What should my na.action be in

Hi there, I am trying to compute Gini coefficients for vectors containing income classes. The data I possess look loke this: yit <- c(135, 164, 234, 369) piit <- c(367, 884, 341, 74 ) where yit is the vector of income classes, and fit is the vector of associated frequencies.(This data is from Rustichini, Ichino and Checci (Journal of Public Economics, 1999) ). In ineq pacakge, Gini( )

Hi, I have two questions on the function "readNamedRegionFromFile" in XLConnect pacakge. 1. In the documentation, # multiregion xlsx file from demoFiles subfolder of package XLConnect demoExcelFile <- system.file("demoFiles/multiregion.xlsx", package = "XLConnect") # Load a single named region into a single data.frame. df

So I can just copy the data into the new directory the package creates? On Mon, Jun 29, 2015 at 10:42 AM, Reindl Harald <h.reindl at thelounge.net> wrote: > > > Am 29.06.2015 um 16:28 schrieb Jason Waters: > >> I understand about using the newer binaries, but what I really want to >> "save" is the active directory. Sorry I should have been clear. I do

Hi all, One of the things I find most problematic in R is the partial matching of names in lists. Robert and I have discussed this and we believe that having a mechanism that does not do partial matching would be of significant benefit to R programmers. To that end, I have written a patch that modifies the behavior of "[[" as follows: 1. [[ gains an 'exact' argument with

I go back and forth between windows and linux, and find myself running into problem with line endings. Is there a way to control the line ending conversion when writing files, such as write and cat? More explicitly I want to be able to write files with LF line endings rather than CRLF line ending on windows; and CRLF line endings instead of LF on linux, and I want to be able to control when the

Hello everyone, I am just trying to colloct all my function into a new packages. I met two questions which hurt me so much: 1. when I use the "prompt" to help to write Rd file for a variable x which is character vector, say x <- c("a","b"), it always give the error informaion: Error in get(x, envir, mode, inherits) : variable "a" was not found.

I've been experimenting with install.packages and it's new ability to track down dependencies from a list of repositories and encountered this: install.packages(c("foo", "bar"), repos="http://cran.r-project.org", dependencies=c("Depends", "Suggests")) dependencies 'foo' are not availabledependencies 'bar'

Hi, namespaceImportFrom in base/R/namespace.R has the following: fdef <- methods:::getGeneric(genName, impenv) The definition of getGeneric is in methods/R/RMethodUtils.R starts with: getGeneric <- ## return the definition of the function named f as a generic. ## ## If there is no definition, throws an error or returns ## NULL according to the value of