similar to: R build under mandriva 10.2

Hi, here are a couple of strange things happening with R.2.2.0 compiled under Mandrake-10.1 At the begining of the story I have segmentation fault using package RandomFields in conjuction with some Fortran code of mine loaded with dyn.load. One of my fortran programs contains a subroutine named fstat Trying to trace , I simplified the sequence as much as possible and I end up with the the

Hi, I have a package of my own which seems to work fine under linux. I want to make a compiled version for windows. (I work with windows 2000 and R 2.0) I have followed the steps described in the file readme.packages (in the top-level directory of the binary installation) and I had a trouble at this step (which aim is not documented): C:\Program Files\R\rw2000\src\gnuwin32>make libR.a

Hi, here are a couple of strange things happening with R.2.2.0 compiled under Mandrake-10.1 At the begining of the story I have segmentation fault using package RandomFields in conjuction with some Fortran code of mine loaded with dyn.load. One of my fortran programs contains a subroutine named fstat Trying to trace , I simplified the sequence as much as possible and I end up with the the

Hi all, I'm working out some Fortran code for which I want to compute the Choleski decomposition of a covariance matrix in Fortran. I tried to do it by two methods : 1) Calling the lapack function DPOTRF. I can see the source code and check that my call is correct, but it does not compile with: system("R CMD SHLIB ~/main.f") dyn.load("~/main.so") I get: Error in

Hi , I'm currently trying to make available a few fortran subroutines and R functions (which make interface to these subroutines), as an R package. I'm doing it under linux with R 1.9.0 (but hope to do it for windows too). I have trouble for loading my fortran code. Here are the steps involved : 1) In R: # Create tree for package

Hi, I have some trouble with the result of a fortran function calling the R binomial RNG: The C function rbinom is wrapped as in the file attached. My main fortran program starts as call rndstart() and ends as call rndend() I happen to call the binomial RNG within a loop as b = ggrbinom(1.d0,0.5d0) write(*,*) 'b=',b In certain cases, after a few iterations in the loop, b get

I would like to call C routines from Fortran under linux as suggested in section 5.6 of the "Writing R extensions" documentation. I'm familiar with Fortran but not with C. I understand the example provided in Fortran: subroutine testit() double precision normrnd, x call rndstart() x = normrnd() call dblepr("X was", 5, x, 1) call rndend() end but I don't understand

As of quite recently I experience failures to compile source packages. Messages like * Installing *source* package 'dse1' ... ** libs g77 -mieee-fp -fPIC -g -O2 -c dsefor.f -o dsefor.o gcc -shared -o dse1.so dsefor.o -L/usr/lib/gcc-lib/i486-linux/3.3.3 -L/usr/lib/gcc-lib/i486-linux/3.3.3/../../.. -lfrtbegin -lg2c-pic -lm -lgcc_s -L/usr/lib/R/bin -lR /usr/bin/ld: no se puede

Hi all, I've been trying to install the "mvtnorm" package (in a Linux R version) without sucess. I write install.packages("mvtnorm",lib="/home/posmae/cnaber",repos="http://cran.uk.r-project.org/") and the following message arises ================================================== downloaded 160Kb * Installing *source* package 'mvtnorm'

I had installed R from source on Fedora Core 3. Then I upgraded to Fedora Core 4, but left R alone. R worked fine, until I trued to update.packages(). Even then, many packages updated just fine, but two of them, cluster and mgcv, failed with the following error message (using cluster as an example): gcc -shared -L/usr/local/lib -o cluster.so clara.o daisy.o dysta.o fanny.o meet.o mona.o pam.o

Hi I am having problems compiling R on a Solaris 10 opteron box we have on trial. checking for Fortran libraries of g77... -L/usr/ccs/lib -L/usr/lib - L/usr/local/lib -L/usr/local/lib/gcc-lib/i386-pc-solaris2.10/3.3.2 - L/usr/ccs/bin -L/usr/local/lib/gcc-lib/i386-pc- solaris2.10/3.3.2/../../.. -lfrtbegin -lg2c -lm -lgcc_s -lfrtbegin: - lg2c: checking how to get verbose linking output from

I hope someone can point me, a newcomer to building R as well as 64-bit R, in a useful direction. I have a dual Opteron 275 box running RedHat EL4. I ran configure successfully, and, then, get the following error while running make: make[4]: Entering directory `/tmp/R-2.2.0/src/modules/lapack' g77 -fPIC -g -O2 -ffloat-store -c dlamc.f -o dlamc.lo g77 -fPIC -g -O2 -c dlapack0.f -o

Hi, While I was trying to build R 2.5.0 src on Red Hat Enterprise Linux ES release 4 (Nahant Update 4) Kernel 2.6.9-42.ELsmp on an x86_64 The following errors occurred: gcc -std=gnu99 -shared -L/usr/local/lib64 -o lapack.so Lapack.o -L../../../lib -lRlapack -L../../../lib -lRblas -lg2c -lm -lgcc_s /usr/bin/ld: /usr/lib/gcc/x86_64-redhat-linux/3.4.6/libg2c.a(s_cat.o): relocation R_X86_64_32

First, my site will be down December 27-28 because of a network upgrade at Penn. It will also be down at least one day before that, while I upgrade the operating system. (And another day some time in January because of a planned power outage.) Second, I have replaced the search engine in my R site: http://finzi.psych.upenn.edu/ I am now using Namazu instead of HtDig. The direct link to the

To: jnf@pcisys.net Subject: Compilation of R under Caldera OpenLinux 2.2 > On Sat, 28 Aug 1999 jnf@pcisys.net wrote: > > > > I am attempting to compile R-0.64.2 under Caldera OpenLinux 2.2. I have > > KDE installed but not gnome. When I ran configure, it correctly > > indicated that gnome is not installed. However when I then ran make, I > > received errors

hello, I create a package which includes C code and Lapack. But when I run " R CMD check ". an error message, "/usr/bin/ld: cannot find -lfrtbegin " occurs. could you tell me what is the problem? the detailed message is as follows: [credsim@confsys ~/src]$ R CMD check var * checking for working latex ... OK * using log directory '/home/credsim/src/var.Rcheck' *

I would like to call C routines from Fortran as suggested in section 5.6 of the "Writing R extensions" documentation. I'm familiar with Fortran but not with C. I understand the example provided in Fortran: subroutine testit() double precision normrnd, x call rndstart() x = normrnd() call dblepr("X was", 5, x, 1) call rndend() end but I don't understand the purpose

Dear list, I'm having a problem configuring R-1-9-patched on a Intel Xeon machine running Fedora Core 2. I used svn to checkout the source, altered config.site to add some optimisation flags to match the Fedora rpm on CRAN (the flags work fine on two other P3 or P4 machines I've compiled R on). ./configure fails with: <snip> checking for long double... yes checking size of

To: jnf@pcisys.net Subject: Compilation of R under Caldera OpenLinux 2.2 > On Sat, 28 Aug 1999 jnf@pcisys.net wrote: > > > > I am attempting to compile R-0.64.2 under Caldera OpenLinux 2.2. I have > > KDE installed but not gnome. When I ran configure, it correctly > > indicated that gnome is not installed. However when I then ran make, I > > received errors

I am using rw1001 on Windows 98. I have a package that involves both c and fortran code, which compiled successfully under cygnus b20.1 with Mummit Kahn''s port of gcc 2.95.2. I have upgraded to the new net release of cygwin (version 1.1, including the recent cygwin package upgrade to 1.1.1). Now when the dll for my package is being created, I get the string of errors like: [...] gcc