similar to: calling fortran functions CHOL and DPOTRF form Fortran

Hi , I'm currently trying to make available a few fortran subroutines and R functions (which make interface to these subroutines), as an R package. I'm doing it under linux with R 1.9.0 (but hope to do it for windows too). I have trouble for loading my fortran code. Here are the steps involved : 1) In R: # Create tree for package

I would like to call C routines from Fortran under linux as suggested in section 5.6 of the "Writing R extensions" documentation. I'm familiar with Fortran but not with C. I understand the example provided in Fortran: subroutine testit() double precision normrnd, x call rndstart() x = normrnd() call dblepr("X was", 5, x, 1) call rndend() end but I don't understand

Hi, I have a package of my own which seems to work fine under linux. I want to make a compiled version for windows. (I work with windows 2000 and R 2.0) I have followed the steps described in the file readme.packages (in the top-level directory of the binary installation) and I had a trouble at this step (which aim is not documented): C:\Program Files\R\rw2000\src\gnuwin32>make libR.a

Hi, I have some trouble with the result of a fortran function calling the R binomial RNG: The C function rbinom is wrapped as in the file attached. My main fortran program starts as call rndstart() and ends as call rndend() I happen to call the binomial RNG within a loop as b = ggrbinom(1.d0,0.5d0) write(*,*) 'b=',b In certain cases, after a few iterations in the loop, b get

Hi, here are a couple of strange things happening with R.2.2.0 compiled under Mandrake-10.1 At the begining of the story I have segmentation fault using package RandomFields in conjuction with some Fortran code of mine loaded with dyn.load. One of my fortran programs contains a subroutine named fstat Trying to trace , I simplified the sequence as much as possible and I end up with the the

Hello, I've just compile R under solaris 7, everything went right, unfortunatly when I run R as a normal user it returns saying: $./R GUI `X11' is not supported However as root it works fine in text mode, that's what I want $./R R : Copyright 2000, The R Development Core Team Version 1.0.0 (February 29, 2000) R is free software and comes with ABSOLUTELY NO WARRANTY. You are

I would like to call C routines from Fortran as suggested in section 5.6 of the "Writing R extensions" documentation. I'm familiar with Fortran but not with C. I understand the example provided in Fortran: subroutine testit() double precision normrnd, x call rndstart() x = normrnd() call dblepr("X was", 5, x, 1) call rndend() end but I don't understand the purpose

After upgrading from mandrake 10.1 to mandriva 10.2 I can't build shared archive with R 2.2.0 [guillot at laplace src]$ R CMD SHLIB main.f sub.f wrapper.c gcc -shared -L/usr/local/lib -o main.so main.o sub.o wrapper.o -lg2c -lm -lgcc_s /usr//bin/ld: cannot find -lg2c collect2: ld returned 1 exit status make: *** [main.so] Erreur 1 I guess the information in

Hi, here are a couple of strange things happening with R.2.2.0 compiled under Mandrake-10.1 At the begining of the story I have segmentation fault using package RandomFields in conjuction with some Fortran code of mine loaded with dyn.load. One of my fortran programs contains a subroutine named fstat Trying to trace , I simplified the sequence as much as possible and I end up with the the

Dear list, I apologies first for my English, hope you will understand well my question. I am working on 1/2 hour piezometric data, time unit is second. They present daily oscillation when using the spectrum() function. What I am really interested in, is to find the amplitude corresponding to this oscillation. I work with a college using Matlab, and although we apply the same methodology, our

Let me present to you my problem : I have a character vector x and I would like to obtain the indices of the elements of this vector that yielded exactly a match. For example, x=nom, pattern="b", I would to obtain 2 because "b" is on the second position. First program : nom <- c("a","b","ab") grep("b",nom) 2 3 Then I try the

Hello all. I'm developing a package for R holding a Gibbs sampler, which tends to have better performance when written in C than in R. During each iteration in the Gibbs sampler, I need the inverse of a symmetric matrix. For this, I wish to use lapack, as is concisely suggested in "Writing R extensions", since this will have better performance than I could ever write myself. After

I'm sure that this question gets asked frequently, but a quick perusal of the list archives shows that it hasn't been asked in a least a month or so, so pardon any repetition. What is the current state of asterisk on linux 2.6? I ask, because I spent yesterday giving it a whirl, and everything seems to go just fine till the very last minute. Zaptel, libpri and asterisk compile just

Hi, I am working on a UNIX machine and I am interfacing R and C with the .C function. I am trying to call LAPACK and BLAS routines, but am running into a problem where, while I am able to run the BLAS routines, I cannot run the LAPACK routines. I compile my .c file (at end of email) in the following way: [mhitczen at jlogin2 ~/Cstuff]$ R CMD SHLIB testmore.c gcc -std=gnu99

Hi ! I would like to understand where do affinity.spline.coefs used in function compute.affinities come from ? library(gcrma) data(affinity.spline.coefs) affinity.spline.coefs X1 X2 X3 X4 X5 X1 -0.55004171 -0.58579091 -0.08870557 -0.47774242 0.23205570 0.58002746 X2 X3 X4 X5 X1 X2

Having not much success with my previous question I try to reformulate it: I'm simulating a Markow chain in Fortran interfaced with R. Each loop of my Fortran calls various functions of the R RNG through the wrapper given below. In a run of 100 iterations of the Markov kernel, after 20 iterations, the RNG seems like frozen. For example, the first call to the RNG in my loop is:

Hi, I'm using R 7.0 under Linux as a programming interface to Fortran (g77 v0.5.24). Basically, what I want to do is to call a fortran subroutine of mine which performs MCMC computations. Apparently I'm getting into memory management problems. To track the problem I wrote the following small Fortran subroutine (saved as test.f) : subroutine test(n,p) implicit none

hello, I create a package which includes C code and Lapack. But when I run " R CMD check ". an error message, "/usr/bin/ld: cannot find -lfrtbegin " occurs. could you tell me what is the problem? the detailed message is as follows: [credsim@confsys ~/src]$ R CMD check var * checking for working latex ... OK * using log directory '/home/credsim/src/var.Rcheck' *

Hello every one Working under Windows Xp in French, and R version 2.4.0 (and : > localeToCharset() : "ISO8859-1" ) I am trying to source a file with basic commands. source("R files/InputFile Analysis (Calculs et mises à l'échelle - gestion des pb d'unités).r") and it works fine as long as I do not use command like these ones :

hello, everybody, I create a package by myself named "var" on Linux system. I attach a C code which uses "R_ext/Lapack.h" in directory "src". But when I carry out " R CMD check var", it shows > wxt0124() Error in .C("wxt1221", PACKAGE = "var") : C function name not in DLL for package var Execution halted Could you tell me what is