similar to: install.packages and bundles

Let me redirect the topic a bit. I've been considering unbundling gregmisc. The pro would be that people would find the component packages (i.e. gdata) more easily. The con is that the packages have a number of interdependencies, so you pretty much will need to get most of them anyway. As the latest gregmisc bundle contains a gregmisc package that is just a stub that depends on and loads

Let me redirect the topic a bit. I've been considering unbundling gregmisc. The pro would be that people would find the component packages (i.e. gdata) more easily. The con is that the packages have a number of interdependencies, so you pretty much will need to get most of them anyway. As the latest gregmisc bundle contains a gregmisc package that is just a stub that depends on and loads

I have a revised version of the gregmisc package, which I've converted into a package bundle each of which has a namespace: gplots, gmodels, gdata, gtoools. Of course, there are interdependencies among these namespaces: gsun374: /tmp [11]> cd gregmisc/ gsun374: gregmisc [12]> grep import */NAMESPACE gdata/NAMESPACE:importFrom(gtools, odd, invalid, mixedsort)

Hi, I am trying to install the genetics package on a server with Linux, Fedora. I installed it in a PC and worked fine. In a server since I am not used with R, I am not sure what do I need to change so genetics pkg can see some package dependencies: Any suggestion is appreciated, Aldi Note: genetics expects gregmisc and mvtnorm to be installed already. gregmisc creates gdata etc dependencies.

gregmisc 2.0.0 =========== gregmisc 2.0.0 has been released and is now available on CRAN. Important Changes --------------------------- - Now a package bundle For this release, gregmisc has been split into a bundle containing 4 separate packages: gdata, gmodels, gplots and gtools. All of your favorite functions are still present, but they are now better organized into thematic groups,

gregmisc 2.0.0 =========== gregmisc 2.0.0 has been released and is now available on CRAN. Important Changes --------------------------- - Now a package bundle For this release, gregmisc has been split into a bundle containing 4 separate packages: gdata, gmodels, gplots and gtools. All of your favorite functions are still present, but they are now better organized into thematic groups,

Given the confusions that some users have regarding package bundles, I'd like to suggest some changes to how package bundles are handled. My understanding is that a package bundle is essentially a convenient way to distribute related packages, so that users can download/install them in one shot. However, some users apparently get confused that one can do install.packages("abundle")

Given the confusions that some users have regarding package bundles, I'd like to suggest some changes to how package bundles are handled. My understanding is that a package bundle is essentially a convenient way to distribute related packages, so that users can download/install them in one shot. However, some users apparently get confused that one can do install.packages("abundle")

Dear R-helpers, I am developing a package named LDehatmap. It depends on the "genetics" package and includes two data files and a demo file. When I'm trying to install it, I get the following messages: * Installing *source* package 'LDheatmap' ... ** R ** data ** demo ** help >>> Building/Updating help pages for package 'LDheatmap' Formats: text html

I'm seeing an odd error message when running R CMD check gregmisc with R-1.9.0beta_2004-03-22.tar.gz * checking package dependencies ... WARNING Error in switch(type, code = c("R", "r", "S", "s", "q"), data = c("R", : Argument "type" is missing, with no default Execution halted See the information on DESCRIPTION

Dear R users, I did install R. 2.0.1, and try to load "gap" package. However, below is the message shown when I did load it. Can anybody please let me know my mistakes? ---- > library() > library(gap) Loading required package: MASS Loading required package: genetics Loading required package: combinat Loading required package: gdata Error: package 'gdata' could not be

Hi folks, Win 7 64 bit R 32 bit > install.packages("gregmisc") Installing package(s) into ‘C:\Users\satimiswin764\Documents/R/win-library/2.12’ (as ‘lib’ is unspecified) --- Please select a CRAN mirror for use in this session --- also installing the dependency ‘gmodels’ trying URL 'http://cran.ms.unimelb.edu.au/bin/windows/contrib/2.12/gmodels_2.15.0.zip' Content type

Looking over the contents of various packages, including my own, it is clear that lots of things end up 'hidden away' in packages where they don't belong. My gregmisc package is a particularly egregious example, containing something from almost every functional category. I propose that from time to time the R community go through the complete set of packages and 'refactor'

Hi All, I've been working on updating the 'genetics' package. As a consequence of the upgrade, .First.lib() looks like: .First.lib <- function(libname, pkgname) { if (!require(combinat)) warning("Unable to load 'combinat' library. Function `diseq.ci' will fail.") require(gregmisc) genotype <-

I am using R (version 2.13.0; 2011-04-13). Platform: x86_64-pc-mingw32/x64 (64-bit). The messages that I see is “This application has requested the Runtime to terminate it in an unusual way. Please contact the application's support team for more information” I am using the following libraries: > library(package="gmodels") > library(package="gtools")

Hi, Whenever I run update.packages() certain packages reappear over and over again as packages to be updated. Specifically, the problems appear with the packages gregmisc and gap: > update.packages() gregmisc : Version 2.0.7 installed in /usr/local/lib/R/library Version 2.0.8 available at http://cran.dk.r-project.org Update (y/N/c)? n gap : Version 1.0-3 installed in

Dear all, I use R 2.0.1 on Windows XP professional. When I want to load the 'Gregmisc' library I get the following error message: Error in library(pkg, character.only = TRUE) : 'gregmisc' is not a valid package -- installed < 2.0.0? Can anybody tell me what's wrong with this package? Cheers, Christian

Hi, I just installed the gregmisc bundle. When I do library(gdata) (or library(gtools), library(gmodels)) everything works fine. When I do library(gplots) I get Error in parse(file, n, text, prompt) : syntax error on line 1850 Error in library(gplots) : package/namespace load failed I'm using R-1.7.0 on Mac OS 10.3. Can anybody help me with this? Could I be doing

The cygwin 'cygpath' command can now convert arbitrary windows and unix paths into the short ms-dos 8.3 equivalents. This tools might allow the windows build system to better deal with those messy long Windows file and directory names that contain spaces. EG: warneg@GRDGROL99X1028: src [1]$ pwd /cygdrive/c/Documents and Settings/WarnesGR/My Documents/cygwin_home/src/gregmisc/src

Dear useR I want to know why package gregmisc did not work very well. I did not find this package in my library directory. > local({a <- CRAN.packages() + install.packages(select.list(a[,1],,TRUE), .libPaths()[1], available=a, dependencies=TRUE)}) trying URL `http://cran.r-project.org/bin/windows/contrib/2.0/PACKAGES' Content type `text/plain; charset=iso-8859-1' length 21630 bytes