similar to: R-devel problem

RAqua now builds fine, but for some reason tcl/tk support cannot be compiled in. I get checking for /Library/Frameworks/Tcl.framework/tclConfig.sh... /Library/Frameworks/Tcl.framework/tclConfig.sh checking for /Library/Frameworks/Tk.framework/tkConfig.sh... /Library/Frameworks/Tk.framework/tkConfig.sh checking whether compiling/linking Tcl/Tk code works... no This is with configure

R-devel has the --with-lapack flag for configure. If you build R with --with-blas="-framework vecLib" --with-lapack="--framework vecLib" then the build goes through, using the native optimized BLAS and Lapack in /System/Library/Frameworks/vecLib.framework. Also, it works, in the sense that it does eigenvalue problems correctly. I don't have any timings yet, because I

I have build R-1.6.0 on Jaguar (actually on 10.2.2), using gcc 3.1 from Apple, g77 3.1 from fink, ATLAS from fink. It passes all checks OK. I also re-compiled the 233 packages listed below with the same setup. I have NOT tested all these packages in any detail. A tar.gz file with the whole /usr/local/lib/R will be on ftp://gifi.stat.ucla.edu on Tuesday. It will NOT include anything from fink

I don't think it is necessary to put binary versions of the Darwin/X11 version on CRAN any more. The current sources compile without problems on both Mac OS X 10.1 and 10.2, using either gcc/g77 2.95.2 or gcc/g77 3.1, or f2c. It seems to me that if you are using R from the command line, using X11, that you are sophisticated enough to install the tools below. And, if you want to install and

Small things, mostly. 1. Buildproblem. Well-known and annoying. Build fails if debugging is on (which is the default) because Debugging.h breaks devQuartz.c compiles. If debugging is switched off on the command line or in the environment, then devQuartz.c builds, but aquaconsole.c does not compile, because it needs Debugging.h. I do not want to edit Apple system files, and not files in the R

I have a version of R-devel which is configured with the flags configure --with-tcl-config=/Library/Frameworks/Tcl.framework/tclConfig.sh --with-tk-config=/Library/Frameworks/Tk.framework /tkConfig.sh --enable-R-shlib --with-aqua --without-x TCLTK_LIBS="-framework Tcl -framework Tk" TCLTK_CPPFLAGS="-I/Library/Framewor ks/Tcl.framework/Headers

I was obviously fascinated by Duncan's earlier message on RXLisp. I managed to build a working version of RXLisp for OS X, by some unabashed and rather uninformed hacking. I compiled XLISP-STAT using the gcc flags -fno-common and --no-cpp-precomp (not sure if they are necessary or not, they are part of an older hack). I "make libxlisp.so", using Duncan's replacement for the

Pretty soon, hopefully, the RAqua version will make the Darwin/X11 version unnecessary. In the meantime, for convergence, I'll modify the Gifi version in various ways. -- It's 1.7.1 -- It no longer supports gnome -- It still uses Tcl/Tk for X11 (using 8.5 from CVS) !! It no longer uses anything from fink (readline and dlcompat as on Stefano's site, jpeg and png and teTeX from

OS X 10.2 and higher comes standard with highly optimized versions of BLAS and Lapack in /Systems/Library/Frameworks/vecLib.framework. It seems that even for double precision they do much better. See http://sthmac.magnet.fsu.edu/benchmarks/ I am not sure how these numbers would look on G3 Macs, but obviously for double precision there is not much reliance on Altivec. So I tried to configure

Has anyone successfully check/build tseries for MacOSX? It seems like there is the same problem with symbols duplications. The -m like option does not seem to help. stefano

If one installs the CLI and RAqua versions, by saying both "make install" and "make install-aqua", then packages that use libR.dylib get their symbols from /Applications/StartR.app/RAqua.app/Contents/Frameworks/libR.dylib and not from /usr/local/lib/R/bin/libR.dylib. That's unfortunate, because the first is likely to change, and the second is not. For instance, what

I see something new and unexpected here. > update.packages() trying URL `http://cran.r-project.org/src/contrib/PACKAGES' Content type `text/plain; charset=iso-8859-1' length 163467 bytes opened URL .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... ......... downloaded

Thank you for looking into this so quickly. As you correctly surmise, I was using the Carbon version of R-1.6.1 on Mac OS 10.2.2 (Jaguar) when I got the "wrong" answers. One other observation: The right censoring seems to work fine. Thanks again, Tim On Thursday, November 14, 2002, at 11:09 AM, Jan de Leeuw wrote: > I take that back. I now get the "correct" result

Byron I meant there is no native (Aqua) version of GTK yet (there is wxWindows and Qt and Tk, so possibly GTK will follow). The X11 version of RGtk works for me too. I agree with your diagnosis of the GUI problem. Best -- Jan On Monday, August 19, 2002, at 12:08 AM, Byron Ellis wrote: > > On Monday, August 19, 2002, at 12:09 AM, Jan de Leeuw wrote: >> > > I accidentally

While builds and validations of R-1.6.2beta_2002-12-20 were successful on several systems, there were a few failures: ------------------------------------------------------------------------ Apple Darwin 6.2 (MacOS 10.2.2) with gcc-3.2.1: gcc -dynamiclib -flat_namespace -undefined suppress -o .libs/libgslcblas.0.0.0.dylib sasum.lo saxpy.lo ... isamax.lo izamax.lo xerbla.lo -lc -install_name

I did: ./configure --with-blas='-framework vecLib' --with-lapack --with-aqua make sudo make install sudo make install-aqua Everything seems to be OK (some warnings about multiple definitions of some symbols). However: bass$ /Library/Frameworks/R.framework/Resources/bin/R Fatal error: unable to open the base package I got the same message when clicking on R.app in /Applications This

...unless its me missing something... > help.search("prompt", agrep=F) Error: couldn't find function ".class1" > traceback() 12: initialize(value, ...) 11: initialize(value, ...) 10: new("ObjectsWithPackage", value, package = pkg) 9: metaNameUndo(unique(these), prefix = "M", searchForm = searchForm) 8: methods:::getGenerics(ns) 7:

JSS, which is at http://www.jstatsoft.org, publishes statistical software with manuals, as well as papers describing, comparing, and evaluating statistical software. Abstracts of all contributions accepted in JSS are published in printed form in JCGS. Although we publish software written in any language, we especially welcome software written in R. The general idea is that packages written in R

JSS, which is at http://www.jstatsoft.org, publishes statistical software with manuals, as well as papers describing, comparing, and evaluating statistical software. Abstracts of all contributions accepted in JSS are published in printed form in JCGS. Although we publish software written in any language, we especially welcome software written in R. The general idea is that packages written in R

There are some problems with XML under OS X, nothing serious, but manual intervention is required. 1. For some reason the package has problems matching up the proper include and lib files for xml or xml2. If I install a fresh libxml2 and point the environmental variables to it, it still complains about mismatched header and lib files, which suggests, perhaps, that the test in configure uses