similar to: building r-devel on RedHat 7.1 with gcc 3.1.1

In a box running Mandrake 9 with R 1.6.2 I get problems when trying to install packages Matrix and Akima. It seems my gcc compiler and fortran do not talk to each other. Thanks in advance for any help, Gelu The errors are: * Installing *source* package 'Matrix' ... checking for gcc... gcc checking for C compiler default output... a.out checking whether the C compiler works... yes

I'm trying to build R 1.9.0 to get the opportunity to build rpy for some folks at my office. (I'm a Python guy, not an R guy, so I'm completely unfamiliar with the machinations of building R.) I'm having trouble getting past the configure step. A plain old configure generates this output at the end: checking whether we can compute C Make dependencies... yes, using gcc -MM

Updating my 1.8.0 R installation (>update.packages() ) I obtain the following (SORRY FOR THE LENGTH OF THE LOG BUT IT HELPS!!!): ................ downloaded 135Kb KernSmooth : Version 2.22-11 in /usr/lib/R/library Version 2.22-12 on CRAN Update (y/N)? y mgcv : Version 0.9-3.1 in /usr/lib/R/library Version 0.9-6 on CRAN Update (y/N)? y trying URL

I ran into a problem recently trying to update a package which uses S4 methods using a recent beta of R. I think I can reproduce it with a simple example. I have package called `testpkg' in directory testpkg/. In the R/ subdirectory of testpkg/ I have a file called testpkg.R which contains the following two lines: setClass("testpkg", representation(pts = "list"))

Hi I am having problems compiling R on a Solaris 10 opteron box we have on trial. checking for Fortran libraries of g77... -L/usr/ccs/lib -L/usr/lib - L/usr/local/lib -L/usr/local/lib/gcc-lib/i386-pc-solaris2.10/3.3.2 - L/usr/ccs/bin -L/usr/local/lib/gcc-lib/i386-pc- solaris2.10/3.3.2/../../.. -lfrtbegin -lg2c -lm -lgcc_s -lfrtbegin: - lg2c: checking how to get verbose linking output from

Dear helpers, I am trying to create a library which uses some Fortran source files and Lapack and Blas subroutines. The Fortran source files from the original author contain subroutines isamax.f, sgefa.f and sgesl.f, which are part of BLAS subroutines on my Linux computer, but maybe different (old) versions. So in addition to these subroutines, there are other Lapack and Blas subroutines

Dear list, I'm having a problem configuring R-1-9-patched on a Intel Xeon machine running Fedora Core 2. I used svn to checkout the source, altered config.site to add some optimisation flags to match the Fedora rpm on CRAN (the flags work fine on two other P3 or P4 machines I've compiled R on). ./configure fails with: <snip> checking for long double... yes checking size of

As of quite recently I experience failures to compile source packages. Messages like * Installing *source* package 'dse1' ... ** libs g77 -mieee-fp -fPIC -g -O2 -c dsefor.f -o dsefor.o gcc -shared -o dse1.so dsefor.o -L/usr/lib/gcc-lib/i486-linux/3.3.3 -L/usr/lib/gcc-lib/i486-linux/3.3.3/../../.. -lfrtbegin -lg2c-pic -lm -lgcc_s -L/usr/lib/R/bin -lR /usr/bin/ld: no se puede

--Apple-Mail-7--233789088 Content-Transfer-Encoding: 7bit Content-Type: text/plain; charset=US-ASCII; format=flowed Hi Kurt I currently have on my Mac gcc 2.95.2, 3.1, and 3.3 and the corresponding g77 versions as well. R builds fine with the 2.95.2 combo, it also builds fine with gcc 2.95.2 and g77 3.1. But using gcc 3.1 or gcc 3.3 gives the familiar problem that I mentioned before (although

Hi folks, I am trying to compile R as a 64bit app using gcc on Solaris 9 and get the following error from the configure script when passing the script CFLAGS='-mcpu=v9 -m64': checking how to get verbose linking output from g77... -v checking for Fortran libraries of g77... -L/usr/ccs/lib -L/usr/lib -L/usr/local/lib -L/usr/local/lib/gcc-lib/sparc-sun-solaris2.9/3.3 -L/usr/ccs/bin

I'm trying to write a package which uses classes/methods as defined in the `methods' package. I have a single .R file which defines the class and various methods for that class. At the top of the file I have require(methods) and then setClass("myclass", ...) setGeneric("intersect") setMethod("intersect", "myclass", function(x,y) ...) I noticed

Hi All, I am having trouble installing the sm package, and only the sm package. My box is RedHat 7.3 on a PIV. Readline 4.3-3 is installed (suited for RH 8, but same error under readline 4.2 for RH 7.3), but it seems to be looking for the readline library in the wrong directory. Will installing readline 4.1 do the trick? What else could be done? Rohan Sadler [root at rsadler R]# R CMD

I tried building R-1.6.1 under Mac OS X 10.2.2 and experienced the following build failure: <...stuff omitted...> cc1: warning: changing search order for system directory "/usr/local/include" cc1: warning: as it has already been specified as a non-system directory gcc -bundle -flat_namespace -undefined suppress -L/usr/local/lib -o ctest.so ansari.o chisqsim.o d2x2xk.o

Hi, I'm wondering if it is possible to install a package for R 2.0 on R 1.9.1 on Mac OS X? I'm getting this error which seems to be known issue: library("quantreg") Error in firstlib(which.lib.loc, package) : couldn't find function "lazyLoad" In addition: Warning message: package quantreg was built under R version 2.0.1 Error in

Hello, I am trying to compile sources of R-1.5.0 on a Mandrake 8.1 linux box. For Fortran compiler needs, I downloaded and installed a g77 rpm. But the configure step fails with following output. I would like to know if any of you had similar problem and how you solved. Thanks in advance. Mohan ------------------- configure output ------ checking for g77... g77 checking whether we are using the

In the current R-devel sources, the `pgamma' function gives a warning when the `shape' argument is passed as a vector of length > 1. That is, > pgamma(3, 1) [1] 0.950213 > pgamma(3, c(1, 2)) [1] 0.9502129 0.8008517 Warning message: the condition has length > 1 and only the first element will be used in: if (shape <= 0) stop("shape must be strictly positive")

Does the function 'matmult' still exist in R? It has a help page and is referenced in the help page for 'kronecker', but I can't seem to access the function itself. Obviously, not an issue of great concern but just a curiosity. > version _ platform i386-pc-mingw32 arch i386 os mingw32 system i386, mingw32 status

I am trying to compile R 1.6.1 with gcc 3.2 on Solaris (Sun OS 5.8) and configure gives me: checking whether g77 and gcc agree on int and double... configure: WARNING: g77 and gcc disagree on int and double configure: error: Maybe change CFLAGS or FFLAGS? Complete output from configure is below. I am not setting CFLAGS or FFLAGS, but can someone suggest what I should set them to (or is this some

Hello, After reinstalling the whole OS and R as well, I tried to update.packages() and get the follwing error message: concerning the mgcv update: atlas2-base is installed and blas as well (on debian). I haven't found lf77blas, I assume it's a library or something similar associated with blas. any suggestion how to solve that, thanks Martin * Installing *source* package

Hi there -- I downloaded the MacOS X binaries of R and followed the instructions on installing it, and when I go to perform a tree function, I get the error "Error: couldn't find function "tree"". Do I need to somehow preload the function? If so, how do I do that? Also, update.packages() works for some packages, but not all -- it often fails in the compilation. I have