similar to: Minor bug in maketitle.pl (with bug correction) (PR#864)

Hi, Gordon Smyth brought the following problem to my attention. PROBLEM/"BUG": Using R v1.9.0 alpha for Windows and the latest Rtools from Brian Ripley you get the following problem trying to R CMD build a package (or a bundle); >R CMD build R.basic * checking for file 'R.basic/DESCRIPTION' ... OK * preparing 'R.basic': * checking whether 'INDEX' is

I don't know if this is the correct forum to ask the following question; however, when I search the aroma.affymetrix discussion group, it suggested that I should posted the question to r-help. Here it goes. I followed the instructions on aroma.affymetrix trying to install the packages; following are the steps: > install.packages(c("R.oo", "R.utils"),

Hi, I've got a version of rowMedians(x, na.rm=FALSE) for matrices that handles missing values implemented in C. It has been optimized for memory and speed. To avoid coercing integers to doubles, and hence allocate an additional 200% memory, there is one C function for integers and one for doubles. The rowMedians() implementation is currently sitting in my non-CRAN package R.native

Full_Name: Henrik Bengtsson Version: 1.3.0 OS: Windows Me Submission from: (NULL) (216.175.122.171) I realized that the title of packages in the library index when they are in a bundle is the title of the bundle and not the package. It looks like the TITLE file, which apparently is used for generating the library index, takes the value of the bundle's title and not the package's title.

Hi, I have a function knit_expand() and its source/Rd are below: https://github.com/yihui/knitr/blob/master/R/template.R#L43-L44 https://github.com/yihui/knitr/blob/master/man/knit_expand.Rd When I run R CMD check on the package I get this warning (with both R 2.15.2 and R-devel): * checking for code/documentation mismatches ... WARNING Codoc mismatches from documentation object

Full_Name: Henrik Bengtsson Version: 1.5.1 OS: WinMe Submission from: (NULL) (217.210.0.243) In the Perl script $R_HOME/bin/check there is a bug under the section "Check R code for syntax errors" where the 'Rfiles <- c(...)' is build up. If there are too many files in @Rfiles the source code line generated will be too long and weird things will happen, e.g. strange

The TITLE for the nnet package is garbled: it comes out as nnet Feed-forward neural networks and multinomial log-linear nnet Feed-forward neural networks and multinomial log-linear models The problem is in maketitle: auk% cat DESCRIPTION Bundle: VR Version: 6.1-9 Date: 2000/07/11 Depends: R (>= 1.1) Author: S original by Venables & Ripley. R port by Brian Ripley

Does anyone know if it is possible to add a dictionary file of known words that becomes part of the *built* package to tell 'R CMD check --as-cran' not to report these words as misspelled. I want this dictionary to come with the *.tar.gz such that it will be available regardless where the package is checked. For instance, currently I get: * using log directory

To reply to Yves Gauvreau question (Jan 24, 2001) about how to set values within function, it is possible to do without without using the "<<-" assignment operator or other nasty tricks. I had the same problem and I did a nasty workaround two weeks ago implementing the functionality of reference variables, but today I "ran into" the [R] help page for ".Alias".

Hi, I'm trying to remove/delete a directory usingR. I've tried the following with no success: % Rterm --vanilla > getwd() [1] "C:/Documents and Settings/hb/braju.com.R/aroma.affymetrix/test" > dir.create("foo") > file.info("foo") size isdir mode mtime ctime atime foo 0 TRUE 777 2007-02-28 14:52:10

Using the latest developers version of R [2.12.0 Under development (unstable) (2010-05-21 r52061)], R.exe crashes: "%ProgramFiles%/R/R-2.12.0dev/bin/i386/R.exe" with Windows reporting: Problem signature: Problem Event Name: APPCRASH Application Name: R.exe Application Version: 2.120.52061.0 Application Timestamp: 4bf638bd Fault Module Name: R.exe Fault Module Version:

I want to share this knowledge to save you the hours it took me to troubleshoot the following problem. Maybe you already know about this, but I certainly didn't. In the end I also suggest an update fix. PROBLEM: I have been building packages for a couple of months now without any problems. However, a couple of hours ago I ran into a strange problem, which I first couldn't understand or

Hi. I noticed that Brian Ripley found and corrected a bug in MinGW's ld.exe, see http://www.murdoch-sutherland.com/Rtools/. Thanks for this. I wonder if this is the same bug that cause my problems. I have tiny toy package with C code that installs perfectly on R Version 2.2.1 beta (2005-12-18 r36792) [this version was mislabelled "beta" the first few hours on CRAN when the stable

Hi. If your package require another package in order to define its methods (but afterwards in is not needed), how should one specify this? Is it correct to assume that "Depends" will assure that all packages are loaded (attached? what is the right word) *before* the methods in the current package are defined? Basically I use my own setMethod() called setMethodS3() that is defined in

[cc:ing to the maintainer of digest] FYI, package 'digest' (v0.2.1 2005/11/04 04:45:53) generates the same output regardless of input with R v2.4.0 devel (2006-07-25 r38698). Starting a vanilla R session you get: > library(digest) > digest(1) [1] "3416a75f4cea9109507cacd8e2f2aefc" > digest(2) [1] "3416a75f4cea9109507cacd8e2f2aefc" > digest(rnorm(10)) [1]

I tried different versions of sma**.tar.gz file either with "R CMD INSTALL -l packagepath sma**.tar.gz", "R INSTALL -l path sma**.tar.gz" and under R windows by "install.packages("sma_0.5.15.tar.gz",repos=NULL)" . I got same error ====== * installing *source* package 'sma' ... ** Creating default NAMESPACE file Warning in .write_description(db,

On Mon, Aug 11, 2014 at 02:06:54PM -0500, Andrew Martin wrote: > Hello, > > I am running several virtualization servers with QEMU 1.4.x and > libvirt 1.0.2 on Ubuntu 12.04 and am working on optimizing the cache= > and aio= options for the virtual machines. These VM images are mostly > qcow2, and are served both from a local ext4 filesystem (with > data=ordered,barrier) and

Full_Name: Bart Version: 1.7.1 OS: XP Submission from: (NULL) (150.203.41.62) When trying to load microarray slides (gpr format) into R 1.7.1, I get the following error message Error in scan(file = file, what = what, sep = sep, quote = quote, dec = dec, : line 1057 did not have 43 elements I have been able to load the files on another computer before including an XP machine. I have

Hi, I'm working on a runtime autotuner that utilizes ORCv2 JIT (I'm closely tracking tip-of-tree), so linking new object files and patching in the new function(s) will happen frequently. One of the concerns my runtime system has is the ability to do one of the following: (1) replacement of the contents of a JITDylib with a new object file [to provide semi-space GC-style reclaiming], (2)

On Thu, Aug 31, 2023 at 10:52:59AM +0100, Richard W.M. Jones wrote: > > > Other plugins (eg written in C) ignore or > > > only partially consume the buffer in pwrite all the time, and that's > > > never a problem. > > > > I don't understand. > > > > https://libguestfs.org/nbdkit-plugin.3.html#pwrite > > > >