similar to: R CMD build/check

In revising the splancs package, I use R CMD check. After a number of changes to various files in the directory tree, R CMD check fails at the * checking for undocumented objects ... ERROR stage as shown below. But running undoc() in R (pointed at the Rcheck directory, not on the older version) doesn't show the same error, and grep on the Rcheck R code finds the function. I ran undoc() under

I've been trying "R CMD build" to build my packages because of the various nice checks it does. Here are some questions/comments/problems. 1/ I get a WARNING about RD files without alias for (what seems like) all my Rd files. I'm not sure if this is related to the fact that all my functions are in one .R file. 2/ I get a warning about undocumented objects for all the specific

Martyn Plummer <plummer@iarc.fr> writes: > On 12-Apr-00 Peter Dalgaard BSA wrote: > > Might be a good idea. Mind you, Splus 3.4 does exatly the same thing, > > and I'm a little worried that the uniqueness assumption might kill > > some bootstrapping applications: > > > > glm(y ~ x, data=test.data, subset=sample(seq(along=y),replace=T)) > > Splus

I am unclear on whether to run R CMD check pgkname as user or as root on Linux. When running as user, after all the latex, html, and man files are created, I get the following error message: Rdconv(): Couldn't open '': Permission denied Has anyone dealt with that message? When I run R CMD check a second time, all latex, html, etc. are recreated which takes quite a while. Is there

As cool and wonderful as the package checking tools for R are, I sometimes am stymied when trying to track down a problem. For example, I occasionally see error messages when running R CMD check like the following: [...] * checking Rd files ... OK * checking for undocumented objects ... ERROR * in parse(file, n, text, prompt) : syntax error on line 932 * in undoc(dir =

Hi, I am trying to use xgobi with R on a windows XP machine. I downloaded the package, which seems to have worked and started on the tutorial supplied. The command data(laser) works fine but the command xgobi(laser) returns C:/PROGRA~1/R/rw1051/library/xgobi/scripts/xgobi.bat -vtitle 'laser' -std mmx C:/DOCUME~1/Adam/LOCALS~1/Temp/xgobi-laser19169 > with nothing

Maybe someone can help shed some light on an odd and repeatedly irritating error I noticed when running the check Perl script on my R 1.3 project. In following it line by line, I traced my problem down to the code/documentation matching within check, the most recent version of which seems to verify proper .Rd formatting by means of R's codoc and undoc functions. Under R --vanilla, those two

i just installed the xgobi interrface, and this is what i get when i try to run the example things don't work > xgobi(laser) xgobi -title 'laser' -std mmx -dev 2 /tmp/unixR3e07S15fb & > Neither the file 2 nor 2.dat exists what am i doing wrong? p.s.: xgobi is installed and works -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help

Dear R-users and R-developpers, I've not been able to find 3d graphics in R, like Splus spin() or brush(). Are there any that I've missed and/or is anybody working on implementing these type of functions? Thanks Dr. Agustin Lobo Instituto de Ciencias de la Tierra (CSIC) Lluis Sole Sabaris s/n 08028 Barcelona SPAIN tel 34 93409 5410 fax 34 93411 0012 alobo at ija.csic.es

Hi, I followed the following sequence of commands after installing 'XGobi': >library(xgobi); >data(ToothGrowth); >xgobi(ToothGrowth); I got the following warning message: C:/R13 1.0/rw1030/library/xgobi/scripts/xgobi.bat -vtitle 'ToothGrowth' -std mmx C:/DOCUME~1/h1452992/LOCALS 1/Temp/xgobi-TthGr5705 Warning message: argument `pkg' is deprecated. Use

I have been trying to get Xgobi to work with the function xgobi( ), but I keep on getting the message ""Xgobi requires a filename or some data from stdin" in the DOS-shell. My Xgobi.bat file is : @echo off PATH=c:\windows\ set DISPLAY=195.23.18.11:0.0 set XGOBIDIR=c:/Xgobi3 c:\Xgobi3\xgobi.exe In R I get: > xgobi(D1) C:\RW0642/library/xgobi/scripts/xgobi.bat -vtitle

When I saw "SciGraphica": http://magnet.fsu.edu/~feiguin/scigraphica/screenshots.html I wished it could be a GUI frontend for R on Unix. -- Paul E. Johnson email: pauljohn at ukans.edu Dept. of Political Science http://lark.cc.ukans.edu/~pauljohn University of Kansas Office: (785) 864-9086 Lawrence, Kansas 66045 FAX:

Dear all, first, I would like to thank R-core team for making so a great software available. Thank you all, really! Using R (1.0.0) on a Win98 platform, I need an x-server to run xgobi (through R xgobi interface). I've been using a MI/X server but trying to upgrade I noticed that MI/X is no longer available for free. Similarly, eXceed is available at evaluation version (for a limited time

Dear colleagues, I just upgraded to 1.4.0 version from RH RPM on a RH72 linux i686 machine. Maybe I am the only one, but when I tried then to install 2 packages (namely pspline and xgobi), weird things happened. First on call of library(xgobi) or library(help=xgobi), all looks good, but on call of ?xgobi, or data(PaulKAI), or when trying to look at html help, the package seems empty. More

Dear helpers, I'm working with expression matrices (DNA microarrays) and my professor suggested me to investigate the possibilities of Xgobi. Searching the net I found that I could use it with R. Is that true? How can I do this? I'm working on a Windows ME notebook. I've already got xgobi.zip from CRAN and xgobi.zip from Professor Brian Ripley

Is there any graphical frontend/secondary programm (freely availible for Windowsor Linux) which can be used with R to display the results of a principle component analysis in 3D space (rotatable!?)? It works with Spotfire, but is there any freely or cheaply availible programm? -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read

Hi, The screenshots page of the R-project contains nice 3d images: "3d plot of a surface" and "image and 3d plot of a volcano". What packages were used to generate these images? Or What packages have 3d plotting capabilities? thanks pawel -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read

I've seen XGobi come up in here from time to time, and I wonder what is it, what is it for, do I need it? How about throwing me a bone here! -- Paul E. Johnson email: pauljohn at ukans.edu Dept. of Political Science http://lark.cc.ukans.edu/~pauljohn University of Kansas Office: (785) 864-9086 Lawrence, Kansas 66045 FAX: (785)

In Win95/NT you can use xgobi (program and R interface) as well, provided you will install an x-server on your machine (a free one is available from http://www.microimages.com/freestuf/mix/). Regards! Zdenek Skala ***************************************************** Uli Flenker wrote: I'm not familiar with S/S+, but I think the "xgobi" software package can do what you want

Hi again. Thank you for the tips but I don't know what is a X server. I remember that I?m working with my own notebook. Is this possible? I could also try to run it in my faculty. thanks Luis -------------------------------------------- sapo.pt/kitadsl -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read