Displaying 20 results from an estimated 7000 matches similar to: "png() broken in R-devel"
2012 Jan 18
1
png cairo device problems on Mac 10.6.8
Hi all,
I have been having problems generating png files on a Mac running OS X 10.6.8.
Here's a simple example
> png("foo.png", type = "cairo"); plot(1:10); dev.off();
null device
1
libpng warning: Application built with libpng-1.2.26 but running with 1.5.2
The resultant file is of size 0 Kb.
Is this the proper place to report this issue? Or should
2011 Sep 23
2
cbind() crashes on raw vectors
Hi,
cbind() doesn't seem to like raw vectors:
> df <- cbind(a=integer(4000), b=raw(4000))
> df
*** glibc detected *** /home/hpages/R-2.13.1/bin/exec/R: malloc():
memory corruption: 0x0000000002d73ca0 ***
======= Backtrace: =========
/lib/x86_64-linux-gnu/libc.so.6(+0x79d7a)[0x7f3592b91d7a]
/lib/x86_64-linux-gnu/libc.so.6(__libc_malloc+0x6e)[0x7f3592b9431e]
2011 Dec 07
4
bug in rank(), order(), is.unsorted() on character vector
Hi,
This looks OK:
> x <- c("_1_", "1_9", "2_9")
> rank(x)
[1] 1 2 3
But this does not:
> xa <- paste(x, "a", sep="")
> xa
[1] "_1_a" "1_9a" "2_9a"
> rank(xa)
[1] 2 1 3
Cheers,
H.
> sessionInfo()
R version 2.14.0 (2011-10-31)
Platform: x86_64-unknown-linux-gnu (64-bit)
locale:
[1]
2011 Sep 23
1
broken save(..., compress="xy")
Hi,
With current R devel and R 2.13.1:
> aa=1:5
> save(aa, file="aa.rda", compress="xy")
Error in identical(compress, "gzip") || compress :
invalid 'y' type in 'x || y'
Thanks!
H.
> sessionInfo()
R version 2.13.1 (2011-07-08)
Platform: x86_64-unknown-linux-gnu (64-bit)
locale:
[1] LC_CTYPE=en_CA.UTF-8 LC_NUMERIC=C
[3]
2009 Sep 24
1
crash with NAs in subscripted assignment of a raw vector
Hi,
> x <- charToRaw("ABCDEFGx")
> x[c(1:3, NA, 6)] <- x[8]
*** caught segfault ***
address 0x8402423f, cause 'memory not mapped'
Possible actions:
1: abort (with core dump, if enabled)
2: normal R exit
3: exit R without saving workspace
4: exit R saving workspace
Cheers,
H.
> sessionInfo()
R version 2.10.0 Under development
2010 Jun 03
1
named empty list
Hi,
I just realized that a named empty list is displayed the same
way as an empty list:
> list(aa=2:5)[0]
list()
> list()
list()
For empty atomic vectors, the print method makes the difference:
> c(aa=3L)[0]
named integer(0)
> integer(0)
integer(0)
Maybe lists could do that too?
Thanks,
H.
> sessionInfo()
R version 2.12.0 Under development (unstable)
2011 Dec 09
3
bug in sum() on integer vector
Hi,
x <- c(rep(1800000003L, 10000000), -rep(1200000002L, 15000000))
This is correct:
> sum(as.double(x))
[1] 0
This is not:
> sum(x)
[1] 4996000
Returning NA (with a warning) would also be acceptable for the latter.
That would make it consistent with cumsum(x):
> cumsum(x)[length(x)]
[1] NA
Warning message:
Integer overflow in 'cumsum'; use
2010 Nov 08
2
incorrect DLL path for Rbitmap.dll on Windows
Hello,
I think there is a problem in recent devel builds of R on Windows with
various devices from the grDevices package.
For example:
> capabilities()
jpeg png tiff tcltk X11 aqua http/ftp sockets
TRUE TRUE TRUE TRUE FALSE FALSE TRUE TRUE
libxml fifo cledit iconv NLS profmem cairo
TRUE FALSE TRUE TRUE
2009 Jul 16
1
Resizing a named vector crashes R with gctorture(TRUE) (PR#13837)
On 15/07/2009 8:08 PM, Herv? Pag?s wrote:
> Hi,
>
> > x <- c(a=10, b=20)
> > length(x) <- 1
> > x
> a
> 10
>
> But with gctorture turned on, I get:
>
> > gctorture(TRUE)
> > x <- c(a=10, b=20)
> > length(x) <- 1
> > x
> a
> "a" <---- ???
>
> > x <-
2010 Mar 31
1
as(1:4, "numeric") versus as.numeric(1:4, "numeric")
Hi,
> class(as(1:4, "numeric"))
[1] "integer"
Surprising but an explanation could be that an integer
vector being a particular case of numeric vector, this
coercion has nothing to do because 1:4 is already numeric.
And indeed:
> is.numeric(1:4)
[1] TRUE
> is.numeric(as(1:4, "numeric"))
[1] TRUE
However, 'as(1:4,
2009 Jun 02
2
formal argument "envir" matched by multiple actual arguments
Hi list,
This looks similar to the problem reported here
https://stat.ethz.ch/pipermail/r-devel/2006-April/037199.html
by Henrik Bengtsson a long time ago. It is very sporadic and
non-reproducible.
Henrik, do you remember if your code was using reg.finalizer()?
I tend to suspect it but I'm not sure.
I've been hunting this bug for months but today, and we the help of other
Bioconductor
2009 Jul 15
1
Protection stack overflow
Hi,
> gctorture(TRUE)
> setGeneric("foo", function(x, y) standardGeneric("foo"))
[1] "foo"
> setMethod("foo", c("ANY", "ANY"),
+ function(x, y) cat("calling foo,ANY,ANY method\n")
+ )
Error: protect(): protection stack overflow
Sorry this is something I already reported one week ago here
2013 Apr 05
0
Undesired vertical lines in png file output using 'cairo-png'
Hello all,
I'm writing a file to PNG on Windows 7 using 'cairo-png'. I've been using
it without problem for a while, but abruptly I'm getting what look like
unplotted areas. I'm using the cairo-png specifically because it
sucessfully generates a transparent background, whereas 'windows' doesn't.
The actual issue has a lot of code I don't think it's
2013 Oct 21
2
png(type='cairo'): point symbols without boarders are not anti-aliased?
Hi,
It seems that anti-aliasing in png(type = 'cairo') is not well
supported for the point symbols without boarders, e.g. pch = 16. The
Cairo package works well, though. You can compare png() with
CairoPNG():
png(): http://i.imgur.com/8niB3jX.png
CairoPNG(): http://i.imgur.com/FZBJOxm.png
f = function(dev, ..., main = '') {
dev(...)
plot(c(1, 2, 1, 2), c(1, 1, 2, 2),
2009 Jan 27
0
How do you specify font family in png output; png cross-platform issues
For teaching purposes, I prepared a little R program. I want to give
this to students who can run it and dump out many formats and then
compare their use in LaTeX documents. I do not have too much trouble
with xfig or postscript format, but I've really run into a roadblock
where png files are concerned.
My original problem was that the png device does not accept a family option.
How can I
2013 Apr 04
1
X11 font -adobe-helvetica size 15 could not be loaded
HI All,
I got this Error message, when I tried to plot
?X11 font -adobe-helvetica-%s-%s-*-*-%d-*-*-*-*-*-*-*, face 5 at size 15 could not be loaded
sessionInfo()
R version 3.0.0 (2013-04-03)
Platform: x86_64-unknown-linux-gnu (64-bit)
locale:
?[1] LC_CTYPE=en_CA.UTF-8?????? LC_NUMERIC=C?????????????
?[3] LC_TIME=en_CA.UTF-8??????? LC_COLLATE=en_CA.UTF-8???
?[5] LC_MONETARY=en_CA.UTF-8???
2008 Oct 17
0
beta symbol cut off in y axis label using jpeg/png/tiff
I am having trouble showing the Greek symbol "beta" correctly
in the y-axis label of bitmap plots.
Specifically, on my system the top of the "beta" symbol is cut off
using the following example:
file.jpg <- paste(tempfile(), ".jpg", sep = "")
jpeg(file.jpg, h = 3, w = 3, units = "in", res = 300, type = "Xlib")
boxplot(rnorm(10),
2000 Oct 02
1
R build on i86pc Solaris 2.7 (PR#677)
Full_Name: Albrecht Gebhardt
Version: 1.1.1
OS: i86pc Solaris 2.7
Submission from: (NULL) (143.205.61.82)
jmp_buf type undeclared, may be related to the installed version of libjpeg
(this is v6b), compiler is gcc/g77 2.95.2:
root@pc05-stat[X11]# make
creating src/unix/X11/Makefile
making rbitmap.d from rbitmap.c
make[1]: Entering directory `/usr/share/src/R-1.1.1/src/unix/X11'
gcc -I.
2010 Mar 25
0
Error in png concerning 'type = "cairo"'
Dear R-users,
though i have successfully installed Cairo_1.4-5 package on
my Ubuntu machine,
i become the following error message:
Error in png(plot_name, width = 1600, height = 1200) :
'type = "cairo"' requires cairo >= 1.2 : try 'type =
"cairo1"'
By using
png(plot_name, width = 1600, height = 1200,type = "cairo1")
i become
Warning message:
In
2020 Jun 12
3
tcltk image reading problem (on a mac?): [tcl] encountered an unsupported criticial chunk type "eXIf"
Dear Simon,
> On Jun 11, 2020, at 9:00 PM, Simon Urbanek <simon.urbanek at r-project.org> wrote:
>
> Wayne,
>
> that one is unrelated, but interesting - you can fix it with
>
> sudo install_name_tool -change \
> /usr/local/lib:/opt/X11/lib/libtk8.6.dylib \
> /usr/local/lib/libtk8.6.dylib \
> /usr/local/bin/wish8.6
>
> There is a bug in tcltk with