similar to: ignore error getting next result

Displaying 20 results from an estimated 10000 matches similar to: "ignore error getting next result"

2008 Mar 15
2
Please find the error in my code
hello everybody I use the following code for my programming & it runs with the error as specified below.Any help that would disolve the error will be highly appreciated. Thanks in advance my code looks like this #### R programme for simulating the power of the two sample t test vs various #### non-parametric alternatives sim.size <- 200 sample.size <- 10 set.seed(231) mu1 <- 0 delta
2005 Nov 14
1
effect sizes for Wilcoxon tests
Hello, I use t.test for normal distributed and wilcox.test for non-normal distributed samples. It is easy to write a function for t.test that calculates the effect size, because all parts of the formula are available from the t.test result: r = sqrt(t*t / (t*t + df)) However, for Wilcoxon tests, the formula for effect sizes is: r = Z / sqrt(N) I wonder how I can calculate the Z-score in R for
2006 Nov 08
2
interprete wilcox.test results
Dear All, I am using wilcox.test to test two samples, data_a and data_b, earch sample has 3 replicates, suppose data_a and data_b are 20*3 matrix. Then I used the following to test the null hypothesis (they are from same distribution.): wilcox.test(x=data_a, y=data_b, alternative="g") I got pvalue = 1.90806170863311e-09. When I switched data_a and data_b by doing the following:
2010 Aug 17
3
Weird differing results when using the Wilcoxon-test
Hi, I became a little bit confused when working with the Wilcoxon test in R. As far as I understood, there are mainly two versions: 1) wilcox.test{stats}, which is the default and an approximation, especially, when ties are involved 2) wilcox_test{coin}, which does calculate the distribution _exactly_ even, with ties. I have the following scenario: #---BeginCode--- # big example size = 60
2010 Feb 24
1
extracting results from wilcox_test (package::coin)
Recently, I ran a series of Kruskal-Wallace tests [kruskal.test()] using by() to group by site Output is a list: >Herb.KW Herb.df$ID: 10-1 Kruskal-Wallis rank sum test data: Indicator_Rating by Year Kruskal-Wallis chi-squared = 15.24, df = 7, p-value = 0.03302 ----------------------------------------------------------------------------------------------------- Herb.df$ID: 18-1
2008 Apr 23
2
help on coxph.wtest
Hi, i need to use pspline. In this pspline function coxph.wtest was used. When I try to make some change to this function by pulling out the pspline function, it turns out R gave me an error msg, saying coxph.wtest cannot be found. Even if i dont change anything in pspline and just rename it and run the function, it did not work out. Can any one help me with this? is there anyway to get the
2011 Sep 28
1
Wilcox test and data collection
Dear Contributors I have a problem with the collection of data from the results of a test. I need to perform a comparative test over groups of data , recall the value of the pvalue and create a table. My problem is in the way to replicate the analysis over and over again over subsets of data according to a condition. I have this database, called y: gg t1 t2 d 40 1 1
2008 Jan 26
1
How to apply the wilcox_test function to subsets ?
Dear R-forumites, I want to apply a Wilcoxon test on subsets of the data frame mydata, splitted using the myindice variable. When I send : wilcoxtest <- by(mydata, mydata$myindice, function(x) {wilcox_test(x$value~x$fact)}) I get : Error in eval(expr, envir, enclos) : object "x" not found whereas wilcoxtest <- by(mydata, mydata$myindice, function(x)
2011 Apr 12
2
The three routines in R that calculate the wilcoxon signed-rank test give different p-values.......which is correct?
I have a question concerning the Wilcoxon signed-rank test, and specifically, which R subroutine I should use for my particular dataset. There are three different commands in R (that I'm aware of) that calculate the Wilcoxon signed-rank test; wilcox.test, wilcox.exact, and wilcoxsign_test. When I run the three commands on the same dataset, I get different p-values. I'm hoping that
2004 Oct 18
0
Increasing computiation time per column using lapply
Hi, Would be very glad for help on this problem. Using this code: temp<-function(x, bins, tot) { return(as.numeric(lapply(split(x, bins), wtest, tot))); } wtest <- function(x, y) { return(wilcox.test(x,y)$p.value); } rs <- function(x, bins) { binCount <- length(split(x[,1], bins)); tot <- as.numeric(x); result<-matrix(apply(x, 2, temp, bins, tot),
2006 Sep 29
1
Wilcoxon Rank test of Package Coin
Hi, I am running the following example which can be found on page 12 of the pdf file of COIN package wt<-wilcox_test(pd~age,data=water_transfer,distribution="exact", conf.int=TRUE) "wt" actually contains the estimate of difference in location and the confidence interval of it. I am just wondering how can I extract these values? From the examples, I understand that the
2019 Dec 07
5
Inconsistencies in wilcox.test
Hello, Writing to share some things I've found about wilcox.test() that seem a a bit inconsistent. 1. Inf values are not removed if paired=TRUE # returns different results (Inf is removed): wilcox.test(c(1,2,3,4), c(0,9,8,7)) wilcox.test(c(1,2,3,4), c(0,9,8,Inf)) # returns the same result (Inf is left as value with highest rank): wilcox.test(c(1,2,3,4), c(0,9,8,7), paired=TRUE)
2019 Dec 07
2
Inconsistencies in wilcox.test
Thank you for a fast response. Nice to see this mailing list being so alive. Regarding Inf issue: I agree with your assessment that Inf should not be removed. The code gave me an impression that Inf values were intentionally removed (since is.finite() was used everywhere, except for paired case). I will try to adjust my patch according to your feedback. One more thing: it seems like you
2019 Dec 12
2
Inconsistencies in wilcox.test
>>>>> Karolis Koncevi?ius >>>>> on Mon, 9 Dec 2019 23:43:36 +0200 writes: > So I tried adding Infinity support for all cases. > And it is (as could be expected) more complicated than I thought. "Of course !" Thank you, Karolis, in any case! > It is easy to add Inf support for the test. The problems start with conf.int=TRUE.
2007 Dec 17
2
Capture warning messages from coxph()
Hi, I want to fit multiple cox models using the coxph() function. To do this, I use a for-loop and save the relevant results in a separate matrix. In the example below, only two models are fitted (my actual matrix has many more columns), one gives a warning message, while the other does not. Right now, I see all the warning message(s) after the for-loop is completed but have no idea which model
2006 Aug 25
1
exact Wilcoxon signed rank test with ties and the "no longer under development" exactRanksumTests package
Dear List, after updating the exactRanksumTests package I receive a warning that the package is not developed any further and that one should consider the coin package. I don't find the signed rank test in the coin package, only the Wilcoxon Mann Whitney U-Test. I only found a signed rank test in the stats package (wilcox.test) which is able to calculate the exact pvalues but unfortunately
2009 Sep 15
2
wilcox.test p-value = 0
hi, folks, how have you gone about reporting a p-value from a test when the returned value from a test (in this case a rank-sum test) is numerically equal to 0 according to the machine? the next lowest value greater than zero that is distinct from zero on the machine is likely algorithm-dependent (the algorithm of the test itself), but without knowing the explicit steps of the algorithm
2000 Mar 07
2
AW: anova-bug in R-version 1.0.0? (PR#470)
I think I've discovered what went wrong. My workspace included a function wilcox.test formerly copied from ctest. Now ctest ist part of the distribution and because of that I always got the message: [Previously saved workspace restored] Error in autoload("wilcox.test", "ctest") : Object already exists I didn't take care of this message. Now I removed
2008 Jul 26
1
error in test
Hello everyone, I am trying to use the following code: dat<-read.table(file="C:\\Documents.....txt") class2<-read.table(file="C:\\Documents.....txt") class1<-read.table(file="C:\\Documents .....txt") dat<-as.data.frame(dat) dimnames(dat)[[1]]<-paste("g",c(1:nrow(dat)),sep="")
2005 Mar 21
1
anomalous result for wilcox.exact in exactRankTests
Hi, In the exactRankTest package, I've become aware that you can get anomalous p-values (i.e., above 1) from the wilcox.exact method, as in: > wilcox.exact(c(-0.6,0.8,-0.5)) Exact Wilcoxon signed rank test data: c(-0.6, 0.8, -0.5) V = 3, p-value = 1.25 alternative hypothesis: true mu is not equal to 0 This is disturbing. Has anyone encountered this before, and if so