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Hi all, hope someone can help me out with this. Background Introduction I have a data set consisting of data collected from a questionnaire that I wish to validate. I have chosen to use confirmatory factor analysis to analyse this data set. Instrument The instrument consists of 11 subscales. There is a total of 68 items in the 11 subscales. Each item is scored on an integer scale between 1 to 4.

I want to compute confidence intervals for the random effect estimates for each subject. From checking on postings, this is what I cobbled together using Orthodont data.frame as an example. There was some discussion of how to properly access lmer slots and bVar, but I'm not sure I understood. Is the approach shown below correct? Rick B. # Orthodont is from nlme (can't have both nlme and

Hi, I'm new at this, I'm very confused, and I think I'm missing something important here. In our pet example we have this: > fm <- lme(Orthodont) > plot(Orthodont) > plot(augPred(fm, level = 0:1)) which gives us a trellis plot with the females above the males, starting with "F03", "F04", "F11", "F06", etc. I thought the point of

Dear r-helpers, After successfully running require(nlme) vfr.lmL <- lmList( estimate ~ (slant + respType + visField + hand)^2 | subject, vfr ) pairs(vfr.lmL, id = 0.01, adj = -0.5) # Pinheiro & Bates (p. 141) produces the following error: Error in sprintf(gettext(fmt, domain = domain), ...) : object "form" not found Any guesses as to what I may have done wrong?

Estimados, Muchas gracias por sua ayuda, ya pude instalar data.table y esta funcionando. Respecto al paquete biodiversityR, no se porque ahora no me corre. El script esta correcto, pero no se porque me tira error. > fase<-diversitycomp(biobsp, y=biopcat,factor1="Fase",index="richness",method=?s") Error in diversitycomp(biobsp, y = biopcat, factor1 =

Hi After a few days of very fine work, my dom0 went mad. (using xen-3.0.2) It''s ksoftirqd keeps 70% of cpu all the time. Is there anything I can do? Regards, Steffen begin 666 smime.p7s M,( &"2J&2(;W#0$''`J" ,( "`0$Q"S )!@4K#@,"&@4`,( &"2J&2(;W#0$'' M`0``H(())#""`JPP@@(5H ,"`0("`P]Z''3

Colleagues, I am trying to use my PDC as a time server. time server = yes upon login a group based scripts are executed. Scripts include line: net time \\samba.server /set /yes Time changes only if a user who logs was added Power Users Group on the local machine. My users belong to either staff, pgrads, ugrads, vis UNIX groups. What do I need to do to ensure that time is synchronised on

Hi everybody, i'm trying to draw rarefaction curves to estimate a population size from genotyped faeces. I used the Gimlet software which gave me a script and a "rarefaction.txt" file. I've copied both files in the work directory of R. I changed library(nls) by library(stats) in the script. But now, i'm still unable to run it. If i ask to show error messages, the software

Hi List, I’m using the vegan function specaccum to produce a rarefaction curve. In the function’s help it says: “Function ‘specaccum’ finds species accumulation curves or the number of species for a certain number of sampled sites or individuals”. Well, I would like to finds this curve for individuals, but when I compute it the function (using the ‘rarefaction’ method) gives me Sites, Richness

Hi all, I used R (vegan package) to make rarefaction curves and I calculated the Chao index for each curve. However, the plateau is far from reached. What I want to do now is the following: Based on the Chao index, I want to extrapolate the curve so I get an x-value which gives me an estimation of the total number of clones I'd have to pick up and sequence in order to have a full coverage of

Here's a question for ecologists on the r-help list-- I'm addressing this to ecologists in particular because they're most likely to be familiar with the equation in question but I'll be happy to discuss the problem with anyone who's willing to take a whack at it. I'm trying to write a function to calculate the large sample variance of species richness estimates by

-----BEGIN PGP SIGNED MESSAGE----- Hi, a security hole has been found in the auxiliary fax scripts "faxq" and "faxrunq" in the mgetty+sendfax package. It has been in there since the first day those scripts were written. Due to improper quoting in these shell scripts, it''s possible to execute code with a foreign user id, and get root access to the machine. The

Hello! I am eager to learn if I only have a data about the relationship between otu and sample, could I use the function capscale, and final make a point plot that x-axis is CAP1 and y-axis is CAP2? Besides, what function could I use to make the different rarefaction curve with different color in the a plot in R? Appreciate very much.

Hi everybody, I'm not very experienced with R software. I have used it several times for some of the population genetics analyses. I have problem with executing one of the script. The script is created by another software called Gimlet and it is aimed to calculate rarefaction curve in R software. However, when I try to execute the script, it says: *Error in library(nls) : there is no package

Dear list members, I have a data.frame so shaped: Sector Quadrants Plot Sic Time Species1 Species2 Species3 .. Species-n 1 1 1 1 5 0 0 1 . 0 2 1 1 1 12 1 1 1 . 0 3 1 1 1 34 0 1 0 . 0 4 1 1 1 23 1 1 0 . 0 5 2 1 1 22 1 1 1 . 1 6 2 1 1 10 1 1 1 . 1 7 2 1 1 2 1 0 0 . 0 8 2 1 1 2 0 0 1 . 0 9 3 1 1 12 0 0 0 . 1 . . . . . . . . . .

Hello Tobias, Thank you for the suggestion! Aditya also mentioned this. I will look into it. Best regards, Ruijie Ruijie Fang Email: ruijief at princeton.edu On Tue, Jun 2, 2020 at 12:48 PM Tobias Hieta <tobias at plexapp.com> wrote: > Hello Ruijie, > > One other workload that would be interesting to test might be clang > itself. Building clang with PGO information is a

Dear all community, My issue is related to the R package (made4) that permits me to calculate the RV coefficient of co-inertia. However, it is a theoretical question. And if I am not mistaken, the list Usenet groups sci.stat.consult is not currently active. Let me explain briefly: Through different microbiota datasets, I have plotted PCoA, db-RDA and sPLS-DA using 3 different types of

Thanks Dan and Jon. I made an incorrect assumption that the "use" iterator was actually giving me the "user" when de-referencing it. Did it always have this behavior in previous LLVM versions? I've seen lots of examples of the "use" iterator being dereferenced and resulting Instruction pointer being treated as the "user"? Thanks, Zack On Tue, Jun 9,

Hi I cannot make winbind work correctly. My problem is that my AD users & groupes are not authenticated on my samba box. I made it work correctly on my samba 2.2x, an dfrom my understanding, each time a AD user is connected, a Unix account is created, nad winbind synhronize both accounts. It looks like the user script "/usr/sbin/useradd -s /bin/false %u" doesn't work, and my

Hi all, I've followed the instructions in the DOMAIN.txt document to setup roaming profiles for my Win 95/98 workstations with great success....except for one thing. Prior to setting the samba server up as a domain server I had the workstations mapping the users' home directories to E drive (right click the share on the server & select Map Network Drive). After setting up the samba