similar to: protecting files from deletion, and using --delete-excluded

Hi all, I used `gzfile` and `gzcon` to read a compressed file but I found that `gzcon` gave me a different result than `gzfile`. It seems like the `gzcon` does not handle the data correctly. I have posted an example below. In the example, a portion of a compressed file is downloaded from Google Cloud as a raw vector, and the data is saved into a temp file. If I use ` gzfile` to read the file, it

I'm encountering excruciatingly slow load times for character vectors in R 2.6.0-- up to 30sec for a 15K file that contains a no-attributes character vector of length ~1e4 and object size ~0.5MB. In R 2.5.1, repeated loads of the same set of files are near-instantaneous. The problem is proving tricky to reproduce consistently from scratch, so I have attached the 3 files used in the examples

I am trying to use the Windows COM interface under R 2.0, and have encountered the following difficulties: - the package RDCOMClient installs, loads and works under R 1.9.1, installs under R2.0, but does not load or work under R2.0 - the package SWinTypeLibs does not install or load under either R 1.9.1 or under R2.0 For the moment I am concentrating on the RDCOMClient package as it seems to

Dear R-list, Realising the importance of updating the R base, I tried to compile the source file of R2.2.1 in my machine, but failed. According to "R for Mac OS X FAQ", i've got the basic dependencies which are gcc 3.3 and g77 3.4. ./configure is fine Here are the errors I got from make: >make ... gcc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre

Dear R developers, Running a R CMD check under R2.2 gives me the error messages (appended to this e-mail) while the with R2.1 the check on the same package directory runs fine. To my knowledge the configuration of R2.2 and R2.1 on my machine are identical. * checking S3 generic/method consistency ... WARNING Error: .First.lib failed for 'SBMLodeSolveR' Call sequence: 2:

Hi everyone, I've noticed new behavior in `regexpr(..., perl = TRUE)` on Windows with R4.0 and above with Unicode characters. Here's a minimal example where I'd expect to see a start value of `5` (as R 3.6.2 and below gives), but R 4.0.0 (and R 4.0.1) now returns: ``` > regexpr("b", "foo\U0001F937bar", perl = TRUE) #> [1] 6 #>

I noticed that R 4.0.0 is now available for ubuntu on CRAN. I attempted to do a clean install on 18.04 using: sudo apt install r-base after adding deb https://cloud.r-project.org/bin/linux/ubuntu bionic-cran40/ to /etc/apt/sources.list. Unfortunately, apt reports that r-recommend is a dependency and it won't be installed. Upon inspecting the R4.0 repos r-recommend is missing not only for

I'm a week-old R user, and have become stuck trying to create usable CSV outputs for post-processing. I am using the package Rioja, which provides small datasets of results. I am running several analyses in a loop and iteratively adding the results to a *list* ("combined"). Within each iteration I use the following: > combined[[i]] <- performance(fit) With two iterations I

Jakob Stoklund Olesen <stoklund at 2pi.dk> writes: >> If we decide to spill r3, we call traceSiblingValue to find the original >> def (the load). After traceSiblingValue we have the load instruction to >> define r1 and the value number information for r3. We don't have the >> value information from r2 as far as I can tell. >> >> Is that correct?

Thanks, Jiefei, unfortunately your example does not work on my system, and also it is far from minimal. The error message you are getting is from Windows and could be caused for example by accidental quoting of the path using single quotes. Issues with RStudio or devtools would have to be discussed in their mailing lists/with their authors, but my guess is that the problem is in your local

I am a novice R user, and have been in trouble to get the right mixed model syntax in microarray analyses. There are three factors: Dye(2 levels), Temperature(3 levels) and Array(3 for each Temperature with a total of 9 arrays). I want to treat array as random, and to regard array variation different between Temperatures. So the model I want to seek is: Y = Dye + Temp + Dye + Temp*Dye +

Hi , I apologize to send again the message but I realized that i didn't put the subject and so people could not reply correctly >Date: Wed, 12 Jan 2005 10:29:09 -0500 >To: r-help@stat.math.ethz.ch >From: saverio vicario <saverio.vicario@yale.edu> >Subject: >Cc: >Bcc: >X-Attachments: > >Dear help desk and R community, >I have a problem on how R2.0 handle

Sophos Plc MailMonitor for Domino/D R1.0(4.003c) Server: BC1 ----------------------------------------------------------------------- Your email contained infected attachment(s). For advice consult your system administrator. ----------------------------------------------------------------------- Mail-Info From: r-help at stat.math.ethz.ch To: ndrews at barker.nsw.edu.au Rec.:

On Sep 19, 2012, at 10:49 AM, <dag at cray.com> wrote: > Jakob Stoklund Olesen <stoklund at 2pi.dk> writes: > > So if there are multiple values between r2 and r3 (r2.1, r2.2, etc.) I > would just follow the chains implied by the SibValueInfo Deps array? > Basically, I want to find all of the live ranges related to r1. It really depends on what you're trying to do.

A while ago Luke Tierney remarked that the warning associated with 'makeActiveBinding'-- "saved workspaces with active bindings may not work properly when loaded into older versions of R"-- should probably be removed in R-devel. It's still cropping up *sporadically* with R-alpha of 3/4/2004, but not every time I call 'makeActiveBinding'. So, two questions: (i) is it

Hi Greg, On 28 April 2020 at 12:05, Greg Siemon wrote: | I noticed that R 4.0.0 is now available for ubuntu on CRAN. I attempted to | do a clean install on 18.04 using: | | sudo apt install r-base | | after adding | | deb https://cloud.r-project.org/bin/linux/ubuntu bionic-cran40/ | | to /etc/apt/sources.list. | | Unfortunately, apt reports that r-recommend is a dependency and it won't

Thanks a lot for your suggestions. I see what you mean. I have removed all unnecessary files and dependences on https://github.com/Jiefei-Wang/example, but still no luck. I've tried to install the package as a user, not admin, but I got the same error. Also, I apologize for spamming the mail list. I will keep my reply as neat as possible. Martin has suggested checking the encoding of the file

Jakob Stoklund Olesen <stoklund at 2pi.dk> writes: > On Sep 19, 2012, at 10:49 AM, <dag at cray.com> wrote: > >> Jakob Stoklund Olesen <stoklund at 2pi.dk> writes: >> >> So if there are multiple values between r2 and r3 (r2.1, r2.2, etc.) I >> would just follow the chains implied by the SibValueInfo Deps array? >> Basically, I want to find

I was preparing a fix for a minor glitch in my optimx package and R CMD check gave an error that the title was not in title case. It is A Replacement and Extension of the optim() Function R CMD check suggests the incorrect form A Replacement and Extension of the Optim() Function 'Writing R Extensions' suggests single quotes, i.e., A Replacement and Extension of the 'optim()'

Dear R users, I am running R2.1 on windows XP SP2. I have a problem that I fear I am providing insufficient information to resolve. But if anyone can suggest directions to understand the problem I would be most grateful. I import modest datasets which create a list of data frames (primary data object) amounting to 15.9Mb when measured internally by object.size() . The sizes of the list