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Hi Guys, Using the PGLMM function in Picante it is theoretically possible to generate other models (than the 5 flagged ones indicated) by differently structuring the independent variable (Y), dependent variables (X), and covariance matrices (VV). I was wondering anyone could give me some advice (or code) for generating a model that includes the phylogenetic repulsion model (3) with the traits

Hello, I am trying to make a package for windows using my linux installation of R. I tried to make the package by first using R CMD build (under linux) to create a tar.gz package. Then I uncompressed and rearchived as a zip package. After installing this under windows, the data files work fine, but the R files aren't seen under windows. Is there some easy way to create a working zip package

Dear All, The latest issue of The R Journal is now available at: https://journal.r-project.org/archive/2018-2/ Many thanks to all contributors - especially reviewers and authors. Regards, John Verzani CUNY/College of Staten Island -- John Verzani Department of Mathematics College of Staten Island, CUNY verzani at math.csi.cuny.edu [[alternative HTML version deleted]]

Dear All, The latest issue of The R Journal is now available at: https://journal.r-project.org/archive/2018-2/ Many thanks to all contributors - especially reviewers and authors. Regards, John Verzani CUNY/College of Staten Island -- John Verzani Department of Mathematics College of Staten Island, CUNY verzani at math.csi.cuny.edu [[alternative HTML version deleted]]

I'm trying to plot a scatterplot of two variables using pch to plot different characters based on a third factor. Here is my example > data("ToothGrowth") > attach(ToothGrowth) > levels(supp) [1] "OJ" "VC" > plot(len ~ dose,pch=as.numeric(supp)) > legend(locator(1),pch=as.numeric(supp),legend=levels(supp)) The command as.numeric(supp) returns 2 2

For what it is worth, here are my experiences. When I first got my zaurus I compiled R version 1.4.0 for the it. It took some time to do, but managed with the skiffclusters at familiar.org. (libf2c was the hardest part). Compilation should be easier now that there are onboard compilers but I haven't tried. I thought this would be neat to have in the classroom. (It did get one student to buy

Hi I would like to start by thanking everyone that replied. Thank you for the information, and for the comments about how or why you use it and thankx for the encouragement re my talk.... Please note that I do not claim to have ellicited a reply from all users of R, this is a quick survey not a census. I have tried to break the responces down to the following categories: Where: (hopefully

Hello all, I've put together a quick and dirty menubar + dialogs + spreadsheet GUI for R using the RGtk package. Performance is not great (OOP is a real memory hog?), the design may be worse, but the hope is that it will be useful in an introductory stats course while we await the arrival of a real gui with ObveRsive and SciViews. The package can be found at

Hello all, I've put together a quick and dirty menubar + dialogs + spreadsheet GUI for R using the RGtk package. Performance is not great (OOP is a real memory hog?), the design may be worse, but the hope is that it will be useful in an introductory stats course while we await the arrival of a real gui with ObveRsive and SciViews. The package can be found at

Dear useR's I have a small basic problem which I am hoping to get some help with. I have a data frame, testSeq_df, with 1 row and 500 columns. Each column is a character (a,c,g or t). I want this sequence to have 4 factors (a,c,g,t). When I try the following: for(i in 1:500){ if (length(levels(testSeq_df[,i]))==1) levels(testSeq_df[,i]) <-

Dear John, Actually, I was using gWidgetsRGtk2. The solution you suggest works fine. Thank you very much. Best regards. Olivier -- ____________________________________ Olivier G. Nuñez Email: onunez en iberstat.es Tel : +34 663 03 69 09 Web: http://www.iberstat.es ____________________________________ El 27/05/2009, a las 17:28, John Verzani escribió: > Dear Olivier, > > I

For those who are interested, I've finished release of 0.4 of pmg and have placed it on my website at http://www.math.csi.cuny.edu/Statistics/R/pmg. The pmg package provides some GUI elements using the RGtk package and friends: RGtk, OOP, RGtkExtra, RGtkHTML, RGdkPixbuf, RGtkViewers and REventLoop from www.omegahat.org and gtkDevice from CRAN. (These require a form of UNIX such as linux, OS

Hi useR's, Has anyone used the "Lars" package in R before? If so, is there any tutorial (not manual) or worked out example online for this R package that one can go through to figure out how one can use this package with lasso regression? I appreciate any help I can get in this direction. Sincerely, Vishal -- *Vishal Thapar, Ph.D.* *Scientific informatics Analyst Cold Spring

First time to post here and not very familiar with wine. My grandson downloaded the demo for Attack on Pearl Harbor and after download finished I upgraded to the latest wine1.3. I right clicked on the desktop icon, went to permissions and marked for executable. When I left click on desktop icon the screen resolution drops from 1600x900 to 1200x768 and the screen goes white with occasional black

Hi All, I am trying to use the "Kernlab" package for training and prediction using SVM's. I am getting the following error when I am trying to use the predict function: > predictSvm = predict(modelforSVM, testSeq); Error in `contrasts<-`(`*tmp*`, value = "contr.treatment") : contrasts can be applied only to factors with 2 or more levels The training file is a

Safe Harbor Games (http://www.safeharborgames.net/) is a popular site in the backgammon community. I am one of several people trying to get the game server to work on Linux with Wine. I am using a Asus EEE 1000HE with the latest version of Easy Peasy (Ubuntu) and Wine. The game software requires browser to launch and I was successful in getting this to work by loading windows version of

Dear Rxperts, Using R 2.8.1 and trying install.views("Cluster") getting error Error: could not find function "install.views" Please help:-( -- Oscar Oscar A. Linares Molecular Medicine Unit Bolles Harbor Monroe, Michigan [[alternative HTML version deleted]]

-----BEGIN PGP SIGNED MESSAGE----- Hash: SHA1 I have an MS-DOS client (Win98SE boot disk) connecting to a Samba v3.2.0 server which is a member of an AD domain (WinNT 5.0/2000 DCs). If it tries to create a file in a directory, it will fail if the path is not all-upper-case. For instance: J:\Bk-Full\DJohnson\S1565\ will fail but J:\BK-FULL\DJOHNSON\S1565\ will succeed. When it 'fails'

Hi there! I'm having some strange permissions issues with one of my systems that's on an Active Directory domain. Here's the basic background: - System is joined to AD domain. Users authenticate fine via Kerberos, and are authorized via an AD user group. They can browse the share, create files, etc. without incident. "valid users" lets them in. - User information for the

Dear Wiza[R]ds, I have a data.frame header that looks like this: v2FfaPre15 v2FfaPre10 v2FfaPre5 v2Ffa2 v2Ffa3 v2Ffa4 I need it to look like this, 15 10 5 2 3 4 i.e., with v2FfaPre and v2Ffa stripped off Any suggestions, Thanks in advance! -- Oscar Oscar A. Linares, MD Translational Medicine Unit LaPlaisance Bay, Bolles Harbor Monroe, Michigan 48161