similar to: plotting and coloring longitudinal data with three time points (ggplot2)

I just updated to R 2.14 with ggplot2 0.9 and am finding bugs. > ggplot2 "GPL-2" "2.14.0" This example is taken from pg 101 in the ggplot book. > plot <- qplot(date, psavert, data = economics, geom = "line") + > ylab("Personal savings rate") + geom_hline(xintercept = 0, colour = > "grey50")' > plot +

hi, folks: i need to transpose the following data: gene tissue patient1 patient2 patient3..... --------------------------------------------- gene1 breast 10 100 1 gene2 breast 20 200 4 gene3 breast 30 50 5 gene4 breast 40 400 9 ................................ to the

I'm trying to plot a time series in ggplot, but a date column in my data frame is causing errors. Rather than provide my own data, I'll just refer to the scale_date example at: http://had.co.nz/ggplot2/scale_date.html , which reproduces the error. > df <- data.frame( date = seq(Sys.Date(), len=100, by="1 day")[sample(100, 50)], price = runif(50) ) > dt <- qplot(date,

df1 -- dataframe with column date and several other columns. #rows >40k Several of the dates are repeated. df2 -- dataframe with two columns date and index. #rows ~130 This is really a map from date to index. I would like to create a column called index in df1 which has the corresponding index from df2. The following works: index <- NULL for(wk in df1$week){ index <-

Hello All, I have posted to this list before regarding the same issue so I apologize for the multiple e-mails. I am still struggling with this issue so I thought I'd give it another try. This time I have included reproducible code and a subset of the data I am analyzing. I am running an ANOVA with three factors: GROUP (5 levels), FEATURE (2 levels), and PATIENT (2 levels), where

Hi All, I've come up with a solution for this problem that relies on a for loop, and I was wondering if anybody had any insight into a more elegant method: I have two data frames, each has a column for categorical data and a column for date. What I'd like to do, ideally, is calculate the number of days between all pairs of dates in data frame 1 and data frame 2 (*but only for members

Hi I have a timeSeries object (X) with monthly returns. I want to display the returns with a barplot, which I can fix easily. But my problem is labaling the x-axis, if I use the positions from the timeseries It gets very messy. I have tried rotating and changing the font size but it doesn't do the trick. I think the optimal solution for my purpose is too only display every second or third

hi guys..please help me with this i am working on two data frames one goes like this: DF1 Sample_id RepairHours Denatured Dose ZeroMean FourtyFiveMean NinetyMean 1 SDM071 0 1 B 60.5 19.0 45.0 2 SDM071 1 1 B 46.0 23.0 42.5 3 SDM071 2 1 B 52.5 24.0 40.0 4 SDM071

Hi all, I have a question about setting arbitrary breaks/labels when using GGPLOT and date/time data on the x-axis. I want to specify the breaks/limits arbitrarily rather than using scale_x_date(major = 'blah'), much like when arbitrarily defining breaks/labels using scale_x_discrete(breaks = blah, labels = blah) I have tried variants such as: scale_x_date(major = seq(from =

I have a fairly large data set with six variables set up like the following dummy: # Create fake data df <- data.frame(code = c(rep(1001, 8), rep(1002, 8)), year = rep(c(rep(2011, 4), rep(2012, 4)), 2), fund = rep(c("10E", "10E", "10E", "27E"), 4), func = rep(c("110000",

Hi all, I'm having a little bit of trouble with some date conversions and am hoping someone can help me out. Thanks in advance. OK, I have two sources of data that provide date info in a csv file differently. I've attached a small zipped file with two text files that illustrate both. (Is it ok to send attachments to this list? Not sure. It's very small.) I need to be able to

Please excuse what I'm sure are very easy questions but I'm relatively new to the R environment. How can I view a range of list elements, but not all. e.g., I had a matrix of patients and then split them out by patient id. I know I can do patlist[[1]] to see the first one, but how can I view, say, the first ten patients? My other question is how to count how many patients have a

Hi everybody, I am beginer in R and I need your precious help. I want to create a small function in R as in sas to retrieve date. I have a file with data that import in R. DATE PAYS nb_pays.ILI. 1 24/04/2009 usa 0 2 24/04/2009 usa 0 3 24/04/2009 Mexique 0 4 24/04/2009

Dear all, ggplot gives me an error when trying to plot time series data using a date variable as the x axis. g<-structure(list(Date = c("2011-12-23", "2011-12-30", "2012-01-06", "2011-12-23", "2011-12-30", "2012-01-06", "2011-12-23", "2011-12-30", "2012-01-06"), variable = structure(c(1L, 1L, 1L, 2L, 2L,

Hello, probably a newbie question, but i didnt find any information on plotting/regressing w.r.t. a date data type. My trials were unfruitful. Can anyone help ? Thanks in advance! Here is my interaction with R: > tabelle date number date2 1 2009-01-1 1673 2009-01-01 2 2009-12-1 2111 2009-12-01 3 2010-7-1 2487 2010-07-01 4 2013-2-1 4301 2013-02-01 > regression.punkte<-lm(tabelle$number

Hi All, I am attempting to work with some data from loggers. I have read in a .csv exported from MS Access that already has my dates and times (in 24 clock format), (with StringsAsFactors=FALSE). > head(tdata) LogData date time 1 77.16 2008/04/24 02:00 2 61.78 2008/04/24 04:00 3 75.44 2008/04/24 06:00 4 89.43 2008/04/24

I am trying to calculate the median of each row of a data frame where the data frame consist of columns of class Date. Below are my test data and best attempt at using apply. I didn't see a solution via Google or the Baron search site. I'd be grateful for any suggestions or solutions. I'm using R 2.0.0 on Mac OS X. Thank you, Stephen Weigand ### Test data date1 <- c(1000,

I am currently puzzled by a seach path behavior. I have a library of a dozen routines getlabs(), getssn(), getecg(), ... that interface to local repositories and pull back patient information. All have a the first 6 arguments in common, and immediately call a second routine to do initial processing of these 6. The functions "joe" and "fred" below capture the relevant

Full_Name: Alexander L. Belikoff Version: 2.8.1 OS: Ubuntu 9.04 (x86_64) Submission from: (NULL) (67.244.71.200) I'm trying to reshape the following data frame: ID DATE1 DATE2 VALUE_TYPE VALUE 'abcd1233' 2009-11-12 2009-12-23 'TYPE1' 123.45 ... VALUE_TYPE is a string and is a factor with only 2 values

Hi, I have a query about sqldf, and dates in general. I couldnt find much on the net or on the forums, hence I am here. Here is the issue: I want to write a function that accepts 3 arguments: date1, date2 and a dataframe, say 'df'. Within the function, I want to populate a temp dataframe which essentially contains the output of the query "select * from df where DATE between date1