similar to: sshd -i problem under 2.1.1p4 as well

Hi. I just noticed the paper by Morales and Nocedal Remark on "Algorithm 778: L-BFGS-B: Fortran Subroutines for Large-Scale Bound Constrained Optimization". TOMS 2011; 38(1): 7 http://www.ece.northwestern.edu/~morales/PSfiles/acm-remark.pdf which describes a couple of improvements (speed and accuracy) to the original Netlib code which AFAICT is that still used by optim() via f2c.

A bit late, but you might like to look at http://www.qimr.edu.au/davidD/polyr.R Regarding the original posters queries: You can analyse polychoric correlations as if they were Pearson correlations using standard software (eg sem), and this usually doesn't do too badly, or go to AWLS (Browne) in LISREL etc, or ML analysis of the full multidimensional contingency table using programs such as

Ron Crump wrote: > Hi, > > I have a dataframe that contains pedigree information; > that is individual, sire and dam identities as separate > columns. It also has date of birth. > > These identifiers are not numeric, or not sequential. > > Obviously, an identifier can appear in one or two columns, > depending on whether it was a parent or not. These should > be

This is a bit late, but: > About two years ago there was a thread about this which suggested that at > that time nobody had these coefficients ready to go. > (a) has anyone in the meanwhile programmed them? http://www.qimr.edu.au/davidD/R/polyr.R > (d) I appreciate this last item is not strictly an R question, but my > intention is to use these as input into the sem package for

I don't know of any R package that can match all the functionality of LEM eg fitting equality constraints to model parameters a la LISREL. WRT dumping tables, I would have thought that as.data.frame.table does pretty much what you want, [not tested] newtab <- as.data.frame(table(a,b,c)) cat("dim\n") for(i in seq(1, ncol(newtab)-1) { cat(nlevels(newtab[,1]," ") }

Hi. I don't know if this a bug or just annoying to me: > x <- c(1,2,3,NA) > table(x, exclude=NULL) x 1 2 3 <NA> 1 1 1 1 > table(factor(x), exclude=NULL) 1 2 3 1 1 1 I don't think many people use factor(x, exclude=NULL): it is not the default handling of character data by read.table(). Cheers, David Duffy. -- | David Duffy (MBBS PhD)

> Date: Mon, 20 Feb 2006 16:43:55 -0600 > From: Aldi Kraja <aldi at wustl.edu> > > Hi, > Using package gclus in R, I have created some graphs that show the > trends within subgroups of data and correlations among 9 variables (v1-v9). > Being interested for more details on these data I have produced also the > var-covar matrices. > Question: From a pair of two

On Fri, 16 Jan 2009, r-help-request at r-project.org wrote: > Date: Thu, 15 Jan 2009 13:29:03 +0100 > From: Pablo G Goicoechea <pgoikoetxea at neiker.net> > Subject: Re: [R] How to create a chromosome location map by locus ID > To: Sake <tlep.nav.ekas at hccnet.nl> > Cc: r-help at r-project.org > Message-ID: <496F2C0F.3040304 at neiker.net> > Content-Type:

On Mon, 8 Nov 2004 ssim at lic.co.nz wrote: > > Is there an add-on package in R for QTL interval mapping for outbred > population, eg. Haley-Knott regression method ? > > Stella I believe Karl Broman's R/QTL (http://biosun01.biostat.jhsph.edu/~kbroman/software/) and Brian Yandell's bim (http://www.stat.wisc.edu/~yandell/qtl/software/), Richard Mott's happyR

I couldn't resist adding a more literal answer unback <- function(x) { chars <- unlist(strsplit(deparse(x),"")) chars <- chars[-c(1,length(chars))] paste(gsub("\\\\","/",chars),collapse="") } unback("\n") | David Duffy (MBBS PhD) ,-_|\ | email: davidD at qimr.edu.au ph:

I couldn't resist adding a more literal answer unback <- function(x) { chars <- unlist(strsplit(deparse(x),"")) chars <- chars[-c(1,length(chars))] paste(gsub("\\\\","/",chars),collapse="") } unback("\n") | David Duffy (MBBS PhD) ,-_|\ | email: davidD at qimr.edu.au ph:

Tony Rossini wrote: > > For various reasons, I spent part of my time today looking at sample > size and power calculation tools (don't ask, don't tell...). This > seems to be one area that R is incredibly weak in (well, nearly all > stat packages, except perhaps specialized tools and SAS); sure, there > are a number of functions in various packages: > >

C?dric Finet wrote: > > I thank you for your answer but I do not understand yet why the Fisher?s exact > test does not work. And why is a "negative key". > > C?dric Finet > Running the original TOMS643 fortran code (R uses an f2c translation of this) says: FEXACT ERROR: 30 Stack length exceeded in f3xact. This problem should not occur. The integer hash key is

Newsgroup members, I appreciate the help on this topic. David Duffy provided a solution (below) that was quite helpful, and came close to what I needed. It did a great job creating two vectors of dichotomous variables with a known correlation (what I referred to as a phi-coefficient). My situation is a bit more complicated and I'm not sure it is easily solved. The problem is that I must

Hi R-users, I need to run Filliben correlation test, but I'm not able to find this function in any package. Perhaps it isn't in a package, but sometimes anybody have program this function or create a routine to estimate it. I found it in google and I hope what I found it's in this page, http://genepi.qimr.edu.au/staff/davidD/R/filliben.R but i can't open it. Anybody can help me?

Hi everybody, I got the following problems, as I tried to connect from ssh (1.2.27) client to openssh (2.1.1p4) server: Client: ------- $ ssh -l user1 192.168.0.2 user1 at 192.168.0.2's password: Last login: Mon Jul 17 11.05.44 2000 from 192.168.0.1 -bash: ?Ptty3: command not found -bash: Zg9tty3: command not found connection to 192.168.0.2 closed. Server: ------- logfile-entries: Jul 17

I've just gotten around to reading the IRC chat with the developers of Unreal Tournament 2003. Looks like Vorbis support is a possibility: [21:53] <Mancubus> Has the idea of a built in mp3 player been introduced? :) [21:53] <Orpheus> Mancubus, wont happen [21:53] <Orpheus> Fraunhofer owns the rights to Mp3. [21:53] <Mancubus> Why not? [21:53] <Orpheus> Epic would

Hi all, I have a question that I don't have a good answer for (note the word "good"; I have an answer, but I consider it not "good"). Take the following data in a single tab-delimited text file: <text> A Labels Value SE 2.5% 97.5% R90 0.231787 1.148044 0.035074 1.531779 R0 0.500861 0.604406 0.185336 1.353552 B Labels Value SE 2.5% 97.5% (Intercept) 1.367514

Release Announcements --------------------- These are security releases in order to address the following defect: o CVE-2017-11103 (Orpheus' Lyre mutual authentication validation bypass) ======= Details ======= o CVE-2017-11103 (Heimdal): All versions of Samba from 4.0.0 onwards using embedded Heimdal Kerberos are vulnerable to a man-in-the-middle attack impersonating a trusted

Thanks Cristoph, I have that code in my backend, but unless I do the following, the registers are never considered 'live' into the call. / Handle a function call let isCall = 1, Defs = [ R0, R1, R2, R3, R4, R5, R6, R7, R8, R9, R10, R11, R12, R13, R14, R15, R16, R17, R18, R19, R20, R21, R22, R23, R24, R25, R26, R27, R28, R29, R30, R31, R32, R33, R34, R35, R36, R37, R38, R39, R40, R41,