similar to: how to install a locally built package

Hi the list, Some rumour (!) say that is it possible to prepare some tests for checking our code using .Rin and .Rout. It seems to be a very good practice, but I did not manage to find information on it. So does someone know how it works ? What are we suppose to write in Rin ? More precisely : - I have a package myPack.r in directories ~/myR/myPack/R/ - I create the directory

Dear all, I writing my first package and everything seems to work (at least up to now) However when I try to build documentation (.dvi or .pdf), using Rcmd Rd2dvi.sh --pdf mypack.Rd I get a mypack.pdf whose title is "R documentation of mypack.Rd" instead of "The mypack package" as it should be, is it right? Also Version, Title, ....License, namely info from the DESCRIPTION

Greetings, I am trying to run a short script from a shell: c:\projects\hell>Rscript --default-packages=mypack X:/4Stephen/commit/curve.R > X:/4Stephen/commit/run1.out Loading required package: utils Warning message: package 'RODBC' was built under R version 2.12.2 Error: could not find function "normalize" Execution halted Warning message: closing unused RODBC handle 1

As the title suggests, when building R packages on Windows, what is the difference between: R CMD build --binary mypack And R CMD INSTALL --build mypack ?? The former is suggested by my previous notes and seems to work, and the latter is suggested by http://www.biostat.jhsph.edu/~kbroman/Rintro/Rwinpack.html, and also seems to work. Thanks in advance Mick

Hi, I have been finding clues on the internet to understand the reason for this warning. The package i have made, builds, installs and works well, except for this warning when I check it: When I run: R CMD check mypack_1.0.tar.gz ... ... .. .. * checking R code for possible problems ... NOTE Found possibly global 'T' or 'F' in the following functions: HWE procRef readMartFile

> > Generally I find it's good to look at examples that work. For > examples of packages using tests, look at source packages on CRAN. > Run the tests on them (using R CMD check), and see what gets produced. > Do you have the name of a package that use it ? I try the 10 first package, and 10 other at random, but none of them use tests... >>> Create tests/myPack.R

Hi, exist any way to create a windows installable package from a Linux R installation ?? I try R CMD build --binary --use-zip MyPack But generate a tar.gz file. Thanks in advance

Hi, I am trying to install a bunch of packages via command line and can use some help in getting it right. My env is a freshly setup OpenSuse 11.4 on an amd desktop. I have not yet installed gcc (Will I need gcc to install packages? I have installed make, assuming R might need it.). I have tried it both under R2.12 and R2.13. I have a list of packages to install such as fImport, fGarch, zoo,

Dear list, I am trying to produce a pdf manual using Rtools (version 3.1.0.1936) on Windows 8 (64-bit). I am also aware of the inconsolata issue posted in the forum (https://stat.ethz.ch/pipermail/r-devel/2013-June/066850.html), and then I have installed the patched version of R-3.0.1. However I still have some errors with the following message: R CMD Rd2pdf mypack Hmm ... looks like a package

hello list, i'm a bit puzzled by the error message i get when i copy past this in R:

Hello, I help to maintain a moderate library of R code. In this code we have a number of calls to the system function along the lines of: exe_output = system("./executable.exe",intern=T) We tend to prefer system() over shell() because, provided the executable has been compiled and the working directory set, the command works under both linux and windows. We've never had a

Hi the devel list. I am adapting the package.skeleton to S4 classes and methods I would have been very proud to post a new working function on this list. Unfortunately, I do not manage to solve all the problems. Mainly - sys.source does not compile a file with setClass - dumpMethod does not exists yet In the following code, thise two problems are notified by a line ################# Still

Dear all, I write to the community to know if other people expierenced the same problem. I want to save a rgl scene where I plotted a 3d cloud of spheres whose radius is set proportional to a given variable and coloured by another group variable and with 95% ellipsoids for distribution of any group. I had no problem at all for coding but I had two problem when saving the scene (in any format)

The xlsReadWrite[Pro] packages allow to natively read/write Excel files (.xls) on the Win 32-bit platform. About a week ago new package versions have been released: * xlsReadWrite 1.5.3 is available at CRAN (for R2.11/2.12) and from www.swissr.org/download (binary builds for R2.9 - R2.12) * xlsReadWritePro 1.6.3 is available from www.swissr.org/download (binary builds for R2.9 - R2.12) * (the

Argh, just now I saw a scrambled start-up message when running xlsReadWrite1.5.2 in R2.12.0 (32-bit) on a Win7 64-bit platform. If you have this situation and use xlsReadWrite 1.5.2 (probably all earlier versions also) you can download a quick fix, see below. I don't know if this also affects Vista/XP 64 bit. - Probably on the weekend I'll have time to release a proper new 1.5.3 version.

Newbie here...just learning Do most packages come with pdf versions of the help files ? If yes, how to I access the entire pdf file to be able to print it ? Is there a standard command for that ? -- View this message in context: http://r.789695.n4.nabble.com/pdf-package-help-files-tp3093926p3093926.html Sent from the R help mailing list archive at Nabble.com.

Hi all, I am trying to understand Writing R Extension... Section 1.1.5, data: I include two datasets in a package, one using 'save', the other using 'write.table': --- 8< ---- myData1 <- data.frame(x=1:10) write.table(myData1,file="myData1.txt") myData2 <- data.frame(x=2:10) save(myData2,file="myData2.Rdata") --- 8< ---- Then R CMD check aks me to

Dear R-Help, On a new server (Ubuntu 10.04.1/Lucid), with R2.14.0, I am trying to create a heatmap using a script that works fine elsewhere (R2.12 on a different Ubuntu server). The script halts when calling png, "Error in X11...unable to start device PNG" (full error message and session info at the bottom of this e-mail). I checked the system requirements within R using: > test =

I have created an R-package with datasets which I want my students to install (the package is not on CRAN). 1) I've put the package on the web in a directory called 'data' and I thought I could do: > install.packages("http://gbi.agrsci.dk/statistics/courses/2011-ISMLS-course/data/LiSciData_0.0-03.tar.gz",repos=NULL,type="source") Warning: invalid package

Dear all, I am trying to conduct an enhanced version of factor analysis with a SPSS interface that allows to use R. This approach has been suggested in the recent article: Basto, M. and J.M. Pereira An SPSS R-Menu for Ordinal Factor Analysis. Journal of Statistical Software 46, pp. 1-29. My variables are ordinal-type and the tool of Basto allows to run polychoric correlations in the SPSS