Displaying 20 results from an estimated 3000 matches similar to: "Using package amelia"
2012 Dec 11
1
Debian packaging and openblas related crash when profiling in R
Hello R-sig-debian and (hopefully) Dirk:
On Debian wheezy, I have the R packaging that CRAN (you) provide. I
run into a little trouble while trying to fiddle with alternative
BLAS.
I know you and I went around on this last year and I think perhaps
I've found something wrong in the framework, or I've just done
something wrong.
I installed the packages openblas-base and openblas-dev, and
2007 Jun 07
1
MITOOLS: Error in eval(expr, envir, enclos) : invalid 'envir' argument
R-users & helpers:
I am using Amelia, mitools and cmprsk to fit cumulative incidence curves
to multiply imputed datasets. The error message that I get
"Error in eval(expr, envir, enclos) : invalid 'envir' argument"
occurs when I try to fit models to the 50 imputed datasets using the
"with.imputationList" function of mitools. The problem seems to occur
2013 Jan 07
1
Amelia algorithm
Dear all.
First of all, my english isn't verry good, but I hope I can convey my concern.
I've a general question about the Amelia algorithm. I'm no mathematician or
statistician, but I had to use R and impute and analyse some data, and Amelia
showed results that fitted my expectations. I'll have to defend my choice soon,
but I haven't totally grasped what Amelia does. I'm
2011 Jul 14
1
Amelia_Multiple_Imputation_with_observational_priors_noms
I am fairly new at using R/programming in general so I apologize if I am
leaving crucial parts of the puzzle out, but here goes.
First and foremost this is the error I am receiving:
Error in muPriors[priors[, 1:2]] <- priors[, 3] :
NAs are not allowed in subscripted assignments
This occurs only when I am using observational priors and some number of
nominal variables, it does not
2007 May 31
0
Using MIcombine for coxph fits
R-helpers:
I am using R 2.5 on Windows XP, packages all up to date. I have run
into an issue with the MIcombine function of the mitools package that I
hoped some of you might be able to help with. I will work through a
reproducible example to demonstrate the issue.
First, make a dataset from the pbc dataset in the survival package
---------------
# Make a dataset
library(survival)
d <-
2024 Jan 06
0
Amelia. Imputation of time-series data
Colleagues,
I have started working with Amelia, with the aim of imputing missing data for time-series data.
Although I have succeeded in getting Amelia to perform the imputation, I have not found any documentation describing how Amelia imputes time-series data. I have read the basic Amelia documentation, but it does not address how time-series data are imputed. The documentation describes
2012 Apr 25
2
Accessing a list
Hi,
I have the following problem- I want to access a list whose elements are
imp1, imp2, imp3 etc I tried theusing the paste comand in a for loop see
the last for loop below. But I keep calling it df but df = imp1 (for the
first run). Any ideas on how I can access the elements of the list?
Isaac
require(Amelia)
library(Amelia)
data.use <- read.csv("multiplecarol.CSV", header=T)
2012 Oct 30
1
Amelia imputation - column grouping
Hi everybody,
I am quite new to data imputation, but I would like to use the R package '
Amelia II: A Program for Missing Data '. However, its unclear to me how
the input for amelia should look like:
I have a data frame consisting of numerous coulmns, which represent
different experimental conditions, whereby each column has 3 replicates. I
want amelia to perform an imputation across
2012 Feb 21
0
Running Amelia with parallel processors in Windows
Hi,
I want to impute a data set multiple times with Amelia, but the data set is
large so it takes a long time. As a result, I'm trying to run the multiple
imputation with parallel processors in Windows, but am having trouble. Here
is a quick example:
######
library(foreach)
library(doSNOW)
registerDoSNOW(makeCluster(4, type = "SOCK"))
getDoParWorkers()
getDoParName()
2013 Feb 15
0
Ho w Do I Get Cox Model Convergence After Multiple Imputation
Due to missing data with some of my predictor variables I first do multiple
imputation as follows:
library(foreign)
library(Amelia)
library(norm)
set.seed(666)
M=10
impdat <-
2009 Apr 22
1
Multiple imputations : wicked dataset ? Wicked computers ? Am I cursed ? (or stupid ?)
Dear list,
I'd like to use multiple imputations to try and save a somewhat badly
mangled dataset (lousy data collection, worse than lousy monitoring, you
know that drill... especially when I am consulted for the first time
about one year *after* data collection).
My dataset has 231 observations of 53 variables, of which only a very
few has no missing data. Most variables have 5-10% of
2010 Dec 22
3
Help with Amelia
Hi
I have used the amelia command from the Amelia R package. this gives me a number
of imputed datasets.
This may be a silly question, but i am not a statistician, but I am not sure how
to combine these results to obtain the imputed dataset to usse for further
statistical analysis. I have looked through the amelia and zelig manuals but
still can not find the answer. This maybe because I dont
2009 May 17
0
BizConf at Ritz-Carlton Amelia Island Resort, August 20-21
[Apologies for the slightly-off-topic posting.]
BizConf is a one-of-a-kind event that I am hosting about 3 months from
now here in northern Florida. It''s a 2-day conference specifically
crafted for independent consultants and owners/managers of small to
mid-sized web consultancies. Because of who I am and the audience I
can reach, I expect the majority of the attendees to be involved
2019 Oct 29
0
[PATCH v2 13/15] drm/amdgpu: Use mmu_range_insert instead of hmm_mirror
On 2019-10-28 4:10 p.m., Jason Gunthorpe wrote:
> From: Jason Gunthorpe <jgg at mellanox.com>
>
> Remove the interval tree in the driver and rely on the tree maintained by
> the mmu_notifier for delivering mmu_notifier invalidation callbacks.
>
> For some reason amdgpu has a very complicated arrangement where it tries
> to prevent duplicate entries in the interval_tree,
2019 Oct 29
0
[PATCH v2 13/15] drm/amdgpu: Use mmu_range_insert instead of hmm_mirror
Am 28.10.19 um 21:10 schrieb Jason Gunthorpe:
> From: Jason Gunthorpe <jgg at mellanox.com>
>
> Remove the interval tree in the driver and rely on the tree maintained by
> the mmu_notifier for delivering mmu_notifier invalidation callbacks.
>
> For some reason amdgpu has a very complicated arrangement where it tries
> to prevent duplicate entries in the interval_tree,
2019 Oct 28
2
[PATCH v2 13/15] drm/amdgpu: Use mmu_range_insert instead of hmm_mirror
From: Jason Gunthorpe <jgg at mellanox.com>
Remove the interval tree in the driver and rely on the tree maintained by
the mmu_notifier for delivering mmu_notifier invalidation callbacks.
For some reason amdgpu has a very complicated arrangement where it tries
to prevent duplicate entries in the interval_tree, this is not necessary,
each amdgpu_bo can be its own stand alone entry.
2010 Jun 04
1
Ignoring missing elements in data.frame()
Hello, I am trying to make a data frame from many elements after
running a function which creates many elements, some of which may not
end up being real elements due to errors or missing data. For example,
I have the following three elements p1s, p2s, and p3s. p9s did not
generate the same data as there was an error in the function for some
reason. I currently have to delete p9s from the
2010 Aug 18
0
info: Retrieving plugin, err: /File[/var/lib/puppet/lib]: Failed to generate additional resources using 'eval_generate': undefined method `closed?' for nil:NilClass
I''m not really sure the problem is a Plugin problem!! Note than a
puppet client was installed, i change the setting of ip/hosname and
try to re inscription the node to puppetmaster. I would like to
understand what happen. The errors/warnings messages are not very easy
to understand and sometime i''m lost. thank you for you advice. Eric
Puppet version: 0.25.4-2ubuntu6
2019 Oct 29
0
[PATCH v2 14/15] drm/amdgpu: Use mmu_range_notifier instead of hmm_mirror
Hi Jason,
I did quick test after merging amd-staging-drm-next with the
mmu_notifier branch, which includes this set changes. The test result
has different failures, app stuck intermittently, GUI no display etc. I
am understanding the changes and will try to figure out the cause.
Regards,
Philip
On 2019-10-28 4:10 p.m., Jason Gunthorpe wrote:
> From: Jason Gunthorpe <jgg at
2019 Oct 28
1
[PATCH v2 14/15] drm/amdgpu: Use mmu_range_notifier instead of hmm_mirror
From: Jason Gunthorpe <jgg at mellanox.com>
Convert the collision-retry lock around hmm_range_fault to use the one now
provided by the mmu_range notifier.
Although this driver does not seem to use the collision retry lock that
hmm provides correctly, it can still be converted over to use the
mmu_range_notifier api instead of hmm_mirror without too much trouble.
This also deletes another