similar to: install.packages & reshape failure

According to Hadley's ggplot book (p. 109), both the graphs below should have a legend, and yet none appears in my hands. Any suggestions? I can't see a typo. Is there a bug? library(ggplot2) data(LakeHuron) huron = data.frame(year=1875:1972,level=LakeHuron) p = ggplot(huron, aes(year)) + geom_line(aes(y= level - 5), colour = 'blue') + geom_line(aes(y= level + 5), colour

I am trying to read an xlsx spreadsheet (1506 rows, 501columns) all populated but getting the following error: Please advise as to how to get around this issue. > res <- read.xlsx("c:\\BSE_v2.xlsx",1) Error in .jcall("RJavaTools", "Ljava/lang/Object;", "invokeMethod", cl, : java.lang.OutOfMemoryError: Java heap space Here is the session info:

I have just upgraded to R 2.13 and have library(ggplot2) in my .Rprofile (among other things). when i start R I get an error message. Has something in the start up scripts changed? Is there a better way to specify the library calls in .Rprofile? Thanks for all of the help in advance. Error: Loading required package: grid Loading required package: proto Error in rename(x, .base_to_ggplot) :

Dear all, I need some help on plotting multiple boxplots on one figure. I have three matrix A, B and C. Each of them is a 1000 by 10 matrix. The 10 columns of all three matrix correspond to the 10 values of the same parameter, say k=1, ..., 10. I want to make a plot where x axis represents different values of k. For each k value, I want to plot three boxplots, one on top of another. For

Dear all, ggplot currently requires 13 packages (grid, reshape, RColorBrewer, proto, splines, MASS, Hmisc, boot, butler, hexbin, mapproj, quantreg, sm). Some of these are absolutely necessary (eg. proto), but most are used for one or two specific tasks (eg. boot is only used to get plogis, used for logit scales). Do you think I should make them all "depends" packages, or

Dear R-Helpers, I'm fiddling with my .Rprofile in Windows XP & R 2.7.0 Beta. I prefer to manually save my workspace but automatically save my command history via the .Rprofile. That is working fine once I found that "utils::" was required before the loadhistory & savehistory functions. What I would like to do is add a separator line with a date between the histories of each

Hi I have a long data set on which I want to do Bland-Altman style plots for each rhythm type Using ggplot2, when I use geom_hline with facet_grid I get an extra set of empty panels. I can't get it to do it with the "Diamonds" data supplied with the package so here is a (much abbreviated) example: > lvexs cvd_basestudy ecd_rhythm fixed_time variable_time 1 CBP05J02

Hi all, When installing ggplot2 on with install.packages("ggplot2", dep = T), the colorspace dependency doesn't get installed (see below for transcript from R session). The relevant lines from my description file are: Depends: R (>= 2.4), grid, reshape (>= 0.8.0), proto, splines, MASS, RColorBrewer, colorspace Suggests: quantreg, Hmisc, mapproj, maps Have I done something

Hi, I am having a trouble parsing dates using strptime() that I get in the format of year and week number. The data looks like this "201127" which means year 2011 and week 27. I would like to graph this using ggplot but then I get a gap between 201054 and 201101 so I thought I would just easily convert it. I tried to use strptime and as.Date and the format string of %Y%W but it seems

(re-sending after confirming list subscription; apologies if this ends up being sent to the list twice) Is the expected behavior from cat(), as used below, a hanging space before \n at the end of the emitted line? firstheader = gsub("\\s+$", "", paste(c("Hybridization REF", s, s), collapse = "\t")) cat(firstheader, "\n", file = filename) When

Hi, I received a bug report from a French user who told me there was something wrong with the function packageVersion(), but packageDescription() worked well. Below is the session info; I'm not sure if other French users can reproduce the error message: > packageVersion('base') Erreur : sp?cification de version incorrecte base > sessionInfo() R version 2.12.1 (2010-12-16)

I am trying to reshape a data set. Could someone please help me with the reshape, cast, and melt functions? I am new to R and I have tried reading up on how to use the reshape package, but I am very confused. Here is an example of what I am trying to do: subject coder score time [1,] 1 1 20 5 [2,] 1 2 30 4 [3,] 2 3 10 10 [4,] 2 2

I'm in the middle of my own little intellectual exercise comparing dcast() and reshape() and have successfully stumped myself. I want to melt() a data frame, then dcast() it into a new form. After doing so, I want to duplicate the process using reshape(). So far, I can do the melt and cast require(reshape2) Raw <- data.frame(site = c(1, 1, 1, 1, 2, 2, 2, 2), id =

Hi, I've tried to capture the basics of this problem I'm having. Been working on this for a couple of days and just cannot get past it. As a test of this list software I've attached is a small text file zipped up. I hope it gets through but if it doesn't I'll post the actual text which is only 26 lines. Put it somewhere sensible and change the first line in the code to point

Hello R users and developers, I have a general question about reshaping a wide data frame using the "reshape" command. I have a data frame consisting of 108 columns that I would like to convert to a long table and remove the metadata (embedded in the column names of the wide table) to new metadata columns in the long format. #example data frame. NOTE column names contain metadata::

Hi all, for some reason I always get stuck spending hours when trying to use reshape or the Reshape package. Heaven knows why. My latest frustration (in 2.7.1, so ignore if this has been fixed): test<-data.frame(matrix(rnorm(42*4),ncol=4),rep(1:21,2),rep(c("a","b"),each=21)) reshape(test,varying=list(colnames(test)[1:4]),direction="long")

hi all, i'v got a question here: i'm writing a *.bat file using Rterm.exe to several simliar R files, which all contain functions from some outside package (eg. quantreg). my question is, how to invoke the package in my *.bat file. Anyone give a hand to me? regards, chenwj Dept. of Statistics Fudan Univerisity, China email: chenwj at online.sh.cn

I know there are a lot of reshape questions on the mailing list, but I haven't been able to find an answer to this particular issue. I am trying to get a datafame structured like this: > sub <- rep(1:5) > ta1 <- rep(1,5) > ta2 <- rep(2,5) > tb1<- rep(3,5) > tb2 <- rep(4,5) > DF <- data.frame(sub,ta1,ta2,tb1,tb2) > DF sub ta1 ta2 tb1 tb2 1

I wonder if the 'sep' argument in reshape() is being ignored unintentionally: ## From example(reshape) df <- data.frame(id=rep(1:4,rep(2,4)), visit=I(rep(c("Before","After"),4)), x=rnorm(4), y=runif(4)) reshape(df, timevar="visit", idvar="id", direction="wide", sep = "_") id x.Before

When reshaping a dataframe in which there are unused factor levels in the id variable, I get the following error: Error in if (!all(really.constant)) warning(gettextf("some constant variables (%s) are really varying", : missing value where TRUE/FALSE needed For example, > df <- data.frame(i = factor(rep(1:5, each = 2)), t = factor(rep(1:2, 5)), x = rep(rbinom(5, 1,