similar to: Include externally generated pdf in output (without Sweave)

Hi everyone. I want to solve the following problem. I have a data.frame and I create a dotplot using lattice. Then I want to use the grid-package to create a combined graphic which contains the dotplot as well as a textplot() (using package gplots) of the data.frame next to the dotplot. Example code: library(lattice) library(grid) library(gplots) xx <- data.frame(f=factor(rep(1:5, each=5)),

Hello, Someone (Erik) recently posted about putting text on a plot. That thread didn't help. I'd like to put text directly below the 'sub' text (with no gap). The code below is the best I can do. Note the large undesirable gap between 'sub' and 'test'. I'd like the word 'test' to be just below the top box() boarder (directly below 'sub'). year

Hi all, Please can you help me to add text to a plot. I would like 5 graphical plots and 1 text plot. I use par(mfrow=c(2,3)) then textplot() I would like to add various pieces of information to the text plot, i.e. some individual values, a table of statistics, some sentences. Is there any easy way of doing this or am I forced to construct a very complicated dataframe? Is this even possible?

Hello, I am using textplot function in gplots package to put some model output inside a PDF file, but it does not seem to work properly with PDF. I am doing follwing: pdf(file="C:/...", paper="a4", width=8, height=12) .model <- lm(.model.formula, data=database) textplot(capture.output(summary(.model)), valign="top", halign="left") I am getting these

Dear R-Listeners, as the Sweave faq says: http://www.ci.tuwien.ac.at/~leisch/Sweave/FAQ.html creating several figures from one figure chunk does not work, and for standard graphics, a workaround is given. Now I have a multipage trellis plot with an a-priori unknown number of pages, and I don't see an elegant way of dividing it up into multiple pdf-files. I noted there is a "page"

Hi, Is there an analog function of textplot in the lattice package? I need to add a data frame to a lattice plot. I work in a Windows environment and I am using R v 2.6.1 Thank you, Judith ____________________________________________________________________________________ Be a better friend, newshound, and

Dear Rweavers, When generating reports with Sweave, I would like to quote some results in the abstract (Something like "The treatment effect is 10 mbar, see page 100). Currently, I used verbatimwrite and friends to write to multiple files to be included, but I wonder is there is a more elegant method for such accumulated forward references in one file similar to toc creation. Sorry if

Dear list, I have two questions regarding grid.symbols() in the grImport package. This package allows you to import a vector graphic in R, and grid.symbols() can be used to plot the resulting glyph at arbitrary locations in a grid viewport. I have tried the code in the grImport vignette, which is most interesting, however I am stuck with two problems: 1- Is there a possibility to create a

Hi , SO i have been on a role of asking simple questions lately. So much for feeling like im getting this R business. I wrote a script 2 weeks ago that utilized "proportion" to turn values in a table (from "table") into proportions to then graph. I now get an error that proportion is not a function so im confused. I ran the script a few times and im thinking maybe i had

I would like to be able to do something like this: <<echo=F,fig=T,width=mywidth>>= ... @ with mywidth set in a previous code chunk. Is there a way to do this in Sweave? (Sorry for two questions in a row, I have been saving these up.) -- Michael

I would like to be able to do something like this: <<echo=F,fig=T,width=mywidth>>= ... @ with mywidth set in a previous code chunk. Is there a way to do this in Sweave? (Sorry for two questions in a row, I have been saving these up.) -- Michael

Hello All, How do I save the output of the R console and the graphic output to the same PDF file and append these to each other? I need to have a frequency table and a corresponding graph, one below the other in a file. I have tried with sending the cross table to the graph window using 'textplot' and then saving the graphic output. However, the table does not look nice in the graph

We have extracted parameters from physiological measurements by fitting SSlogis-like curves with nlsList and nlme. We presented residuals plot in a paper, but a referee argues that these cannot be included (too technical), and r-square values should be given instead to compare the goodness of fit with those of other authors. I remember that 30 years ago in my stat 101, I learned that r-square is

I can't get the PERL subexpression translated to R. Following, for example, B. Ripley's http://finzi.psych.upenn.edu/R/Rhelp02a/archive/58984.html I am using sub, but it looks like an ugly substitute. Assume I want to extract the first alpha part and the first numeric part, but only if they are in sequence. Do I really have to use the sub twice, first extracting the first variable, then

Hi there, I hope I can get advice regarding the calculation of leverage values or studentized residual values of a non-linear regression model. It seems like rstudent() does not work on a nls object. Many thanks in advance! Best regards, Xingli

Dear List, creating factors in a given non-default orders is notoriously difficult to explain in a course. Students love the ifelse construct given below most, but I remember some comment from Martin M?chler (?) that ifelse should be banned from courses. Any better idea? Not necessarily short, easy to remember is important. Dieter data = c(1,7,10,50,70) levs =

Dear R and lme4 users- I am trying to fit a mixed-effects model, with the glmer function in lme4, to right-skewed, zero-inflated, non-normal data representing understory grass and forb biomass (continuous) as a function of tree density (indicated by leaf-area). Thus, I have tried to specify a Gamma distribution with a log-link function but consistently receive an error as follows: >

I read somewhere that vector graphics such as eps or dpf are more favorable than alternatives (jpeg, bmp or png) for publication because vector graphics scale properly when enlarged. However, my problem is that the file generated from a graph of fixed size is too large (in the order of 10MB) because of many data points in multiple scatterplots. Any suggestions? Thanks, Gang [[alternative HTML

Dear List, assume I want to make a minor local change in a package that is supplied as .rda. For example, I want to get rid of the non-verbose-protected "Iteration" message in GLMM/lme4. Probably I have to load / change / save the package, but could someone help me to get the syntax right? Dieter Menne

How can I insert a vector image in svg or pdf format into a plot. Basically i need the equivalent of what the 'pixmap' package does for bitmap images. Cheers, Will Morris