similar to: R and ATLAS

Rhelpers: I'd like to modify this RSQLite statement: rs_stations<-dbSendQuery(con_stations, "select * from stations") so that stations is actually an R variable, e.g.: stations=c("stationA","stationB") How would I modify the above statement to query from stations[[1]] (aka "stationA")? --j

Dear Rhelpers, Is there a faster way than below to set a vector based on values from another vector? I'd like to call a pre-existing function for this, but one which can also handle an arbitrarily large number of categories. Any ideas? Cat=c('a','a','a','b','b','b','a','a','b') # Categorical variable

Hi Rhelpers, I would like to have some help with a plot which is beyond my capabilities. This plot that I am seeking involves an overlay of two different barcharts and one xyplot. The code that I have used is the following : #save(df1,file="M:\\KBR\\df1.RData") load(file="M:\\KBR\\df1.RData") # df1$Year.ord created to obtain the right order i.e. 2015M < 2015K

Rhelpers: I'm trying to make a barchart of a 2-group dataset (barchart(x~y,data=data,groups=z,horizontal=FALSE)). My problem is that I can't, for the life of me, seem to get rid of the inter-bar space -- box.ratio set to 10000 doesn't do much. Any ideas? I'd ideally want zero space between the bars. Thanks! --j -- Jonathan A. Greenberg, PhD Assistant Project Scientist

Rhelpers: Having a problem solving this. I have an xyplot call that looks like this: print(xyplot(temp_species_EAM_Pred_Pop$x+temp_species_NULL_Pred_Pop$x~temp_species_EAM_Pred_Pop$Action,main=current_species, xlab="Action",ylab="Predicted Pop", xlim=c(xmin,xmax),ylim=c(ymin,ymax),

Dear RHelpers, Does anyone know of any R code to perform bivariate Poisson regression (including random effects)? Best wishes Simon Simon D.W. Frost, M.A., D.Phil. Department of Pathology University of California, San Diego Antiviral Research Center (Formerly: UCSD Treatment Center) 150 W. Washington St., Suite 100 San Diego, CA 92103 USA Tel: +1 619 543 8080 x275 Fax: +1 619 298 0177 Email:

Hello, I am having problems installing RSQLite under FC8. The error message seems to indicate Rversion.h and Rconfig.h are missing. To illustrate the problem, I have copied below the output shown when I first install R (binary distribution) and then try to install RSQLite. Because the problem does not occur when installing RSQLite with R under Windows I suspect the problem is perhaps due to my

Hello RHelpers, This may already have been answered, but despite days of scouring through the archives I haven't found it. My goal is to add multiple fitted curves to a plot. An example data set (a data frame named df in following code) is: x1 y1 factor1 4 1298.25 0.00000000 1 5 1393.25 0.00000000 1 6 1471.50

Hello RHelpers! I'm very ashamed but.... I'm creating quite a lot of plots in a big loop...each times the program ask me : > Hit <Return> to see next plot: How do I avoid that? Many, many thanks as always.... Anne ---------------------------------------------------- Anne Piotet Tel: +41 79 359 83 32 (mobile) Email: anne.piotet@m-td.com

Rhelpers: I'm curious what the appropriate analysis to use for testing the hypothesis that two histograms are statistically different from one another? Thanks! --j

Hello Rhelpers, I am trying to represent the following data (hereafter named donnees) in a barchart with a grouping variable : site traitement date s res 1 NT 17/10/2005 normal 76.2 1 T 17/10/2005 normal 103.2 1 NT 23/11/2005 tardif 81.6 1 T 23/11/2005 tardif 98 2 NT 15/10/2005 normal 72.71 2 T 15/10/2005 normal 94.47 2 NT 15/11/2005 tardif 79.65 2 T 15/11/2005 tardif 94.7

Dear Rhelpers I have the problem with initial values, could you please tell me how to solve it? Thank you June > p = summary(maxLik(fr,start=c(0,0,0,1,0,-25,-0.2))) Error in maxRoutine(fn = logLik, grad = grad, hess = hess, start = start, : NA in the initial gradient > p = summary(maxLik(fr,start=c(0,0,0,1,0,-25,-0.2),method="BFGS")) Error in optim(start, func, gr =

Hello. I am a Linux neophyte and know almost nothing ?about compiling, so I would appreciate any help and advice y'all would care to offer. I am trying to compile the 64 bit version of R using a tuned ATLAS and LAPACK (ATLAS 3.9.24). I am running Ubunto 10.04 LTS (through wubi, FWIW). The ATLAS and LAPACK files (atlas.so, f77blas.so, lapack.so, and cblas.so) are sitting in the folder

Hello Rhelpers, I need to run the following loop over a large number of data-sets, and was wondering if it could somehow be vectorized. It's more or less a cumulative sum, but slightly more complex. Here's the code, and an example dataset (called tab in my code) follows. Thanks in advance for any suggestions! res<-0 for (i in min(tab$Date):max(tab$Date)) { if

On 14 March 2012 at 23:09, Simon Urbanek wrote: | I thought I'll post this here since I could not find an answer anywhere I searched: how to setup R with threaded BLAS on Debian/Ubuntu. | | First, neither Debian nor Ubuntu come with optimized ATLAS binaries, simply because by definition they need to be optimized for a particular machine. The good news: it is easy to build: | | apt-get source

Dear R helpers, I would like to have abline, for a lm model for example, lying within data range. Do you know how to get it? Thank in advance Nguyen D Nguyen #CODE x<- rnorm(200, 35,5) y<- rnorm(200, 0.87,0.12) plot(y~x, xlim=c(0,50), pch=17, bty="l") abline(lm(y~x)) # I would like abline is between min(x) and max(x) [[alternative HTML version deleted]]

Hi folks, if you want to use MKL (the fast BLAS I have tested on my Thinkpad T410) with the R 2.14.0 built as Debian/Ubuntu packages available on CRAN mirror, the following tricks may works for without some known side-effects (likes openmp breaking issues), you may try to build your own libblas.so.3gf.0 with following command: $ gfortran -L/opt/intel/lib/intel64 -liomp5

I feel like Marlon Brando in "On the Waterfront" where he's told "It's not your night, kid", except for me it has been the last two months trying to debug memory problems. Now I can't even install an old version of this package on a netbook running the Ubuntu 10.10 netbook remix because it can't find the libraries libf77blas and libatlas. I have even gone to

Hi, Since upgrading to version 2.11.0~20100402-1, starting R fails with: /usr/lib64/R/bin/exec/R: error while loading shared libraries: libblas.so.3gf: cannot open shared object file: No such file or directory Is this occurring to others on sid? -- Seb

I just dumped Vista off a laptop and installed Ubuntu 10.10 (latest release) as the single operating system. I did all of the updates and then installed emacs and ess. Next I installed R by following the the usual instructions on the CRAN site. At this point all is working I am now in the process of installing the packages that I normally have installed. I am having a problem with the LAPACK