similar to: Hgu133acdf Installation Problem

Hi all , I have one query. i have list of some .cel files. in my program i have to mention the path of these .cel files part of my program is, rna.data<-exprs(justRMA(filenames=file.names, celfile.path=*datadir*, sampleNames=sample.names, phenoData=pheno.data, cdfname=cleancdfname(hg18_Affymetrix U133A))) in the place of "datadir" i have to mention the character string of the

Hi, I have a set of genes and its chromosomal physical position in a text file. I want to view those genes in the chromosome using R package GenePlotter. Could any one please tell how to view this. Thanks in advance. Yours sincerely, S.Mahalakshmi [[alternative HTML version deleted]]

Hello, After running R CMD check on my package I received the following error on package dependencies: * using log directory 'C:/z-zBackup/Nuvera Bio on Iatros01/Development/RPackages/nvNormalize/nvNormalize.Rcheck' * using R version 2.9.1 (2009-06-26) * using session charset: ISO8859-1 * checking for file 'nvNormalize/DESCRIPTION' ... OK * checking extension type ... Package *

Hello all, I am trying to use "clim.pact" package for my work, but since this is the beginning for me to use gridded datasets in "R", I am having some trouble. I want to do seasonal analyses like trends, anomalies, variograms, EOF and probably kriging too to downscale my 1 degree gridded data to 0.5.  So, as a first step, I compiled my entire dataset (with 25

Hi, Plotting a graphic into a postscript device using family="mono" returns the following error message: >> family 'mono' not included in PostScript device Looking at postscriptFonts() however lists the "Courier" font as availeable mono font. So where is the problem? Thanks guys for your help. Best regards Benjamin sessionInfo() R version 2.5.0

Hi everyone, My purpose is to read a .CEL file into R. The .CEL file was created from a .CAB by using DTT software found on Affymetrix website I read the .CEL file in R using ReadAffy as follows: > d2=ReadAffy(widget=T) and I complete the fields as required. It does not complain. For example I could find the description: > description(d2) Experimenter name: BB Laboratory: FFL Contact

Hi all,  I have a matrix as given below... year month day prec 1   1980    10   1 13.4 2   1980    10   2  0.0 3   1980    10   3  0.0 4   1980    10   4  0.0 5   1980    10   5  0.0 6   1980    10   6  0.0 7   1980    10   7  0.0 8   1980    10   8  0.0 9   1980    10   9  0.0 10  1980    10  10  0.0 11  1980    10  11  7.4 12  1980    10  12  5.4 13  1980    10  13  7.2 14  1980    10  14  0.0

FYI, I plan on implementing this for F31 if no issues arise. ---------- Forwarded message --------- From: Ben Cotton <bcotton at redhat.com> Date: Tue, 2 Jul 2019 at 10:55 Subject: Fedora 31 System-Wide change proposal: Automatic R runtime dependencies To: <devel-announce at lists.fedoraproject.org>, Development discussions related to Fedora <devel at lists.fedoraproject.org>

I have recently upgraded to Ubuntu Gutsy and, for the first time, am using a 64-bit installation. After failing miserably to install R from source, not a problem for me in the past with a 32-bit install, I went the route of using the Debian Etch build. This went smoothly, but I am unable to update my numerous R and BioConductor packages, getting non-zero exit status errors on each package. Is

Hi all, I'm just tried to start analysing some micro-array chips. And R was asking for this package. When I tried to install it it says that: Using R version 2.10.1, biocinstall version 2.5.10. Installing Bioconductor version 2.5 packages: [1] "hugene10stv1cdf" Please wait... Warning message: In getDependencies(pkgs, dependencies, available, lib) : package ?hugene10stv1cdf? is

Neither biocLite nor the GUI menus can install packages on my system. Here is relevant output: > version _ platform i386-pc-mingw32 arch i386 os mingw32 system i386, mingw32 status major 2 minor 11.1 year 2010 month 05 day 31 svn rev 52157 language R version.string R version 2.11.1 (2010-05-31) > source("http://bioconductor.org/biocLite.R") BioC_mirror =

Send CentOS-announce mailing list submissions to centos-announce at centos.org To subscribe or unsubscribe via the World Wide Web, visit http://lists.centos.org/mailman/listinfo/centos-announce or, via email, send a message with subject or body 'help' to centos-announce-request at centos.org You can reach the person managing the list at centos-announce-owner at centos.org When

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CentOS Errata and Security Advisory 2008:0032 https://rhn.redhat.com/errata/RHSA-2008-0032.html The following updated files have been uploaded and are currently syncing to the mirrors: s390: updates/s390/RPMS/libxml2-2.5.10-8.s390.rpm updates/s390/RPMS/libxml2-devel-2.5.10-8.s390.rpm updates/s390/RPMS/libxml2-python-2.5.10-8.s390.rpm s390x: updates/s390x/RPMS/libxml2-2.5.10-8.s390x.rpm

CentOS Errata and Security Advisory 2008:0836 https://rhn.redhat.com/errata/RHSA-2008-0836.html The following updated files have been uploaded and are currently syncing to the mirrors: s390: updates/s390/RPMS/libxml2-2.5.10-10.s390.rpm updates/s390/RPMS/libxml2-devel-2.5.10-10.s390.rpm updates/s390/RPMS/libxml2-python-2.5.10-10.s390.rpm s390x: updates/s390x/RPMS/libxml2-2.5.10-10.s390x.rpm

CentOS Errata and Security Advisory 2008:0884 https://rhn.redhat.com/errata/RHSA-2008-0884.html The following updated files have been uploaded and are currently syncing to the mirrors: s390: updates/s390/RPMS/libxml2-2.5.10-13.s390.rpm updates/s390/RPMS/libxml2-devel-2.5.10-13.s390.rpm updates/s390/RPMS/libxml2-python-2.5.10-13.s390.rpm s390x: updates/s390x/RPMS/libxml2-2.5.10-13.s390x.rpm

CentOS Errata and Security Advisory 2008:0988 https://rhn.redhat.com/errata/RHSA-2008-0988.html The following updated files have been uploaded and are currently syncing to the mirrors: s390: updates/s390/RPMS/libxml2-2.5.10-14.s390.rpm updates/s390/RPMS/libxml2-devel-2.5.10-14.s390.rpm updates/s390/RPMS/libxml2-python-2.5.10-14.s390.rpm s390x: updates/s390x/RPMS/libxml2-2.5.10-14.s390x.rpm

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Send CentOS-announce mailing list submissions to centos-announce at centos.org To subscribe or unsubscribe via the World Wide Web, visit http://lists.centos.org/mailman/listinfo/centos-announce or, via email, send a message with subject or body 'help' to centos-announce-request at centos.org You can reach the person managing the list at centos-announce-owner at centos.org When

Send CentOS-announce mailing list submissions to centos-announce at centos.org To subscribe or unsubscribe via the World Wide Web, visit http://lists.centos.org/mailman/listinfo/centos-announce or, via email, send a message with subject or body 'help' to centos-announce-request at centos.org You can reach the person managing the list at centos-announce-owner at centos.org When