similar to: "Optional" package dependency

I have a package that can use rmpi, but works fine without it. None of the automatic test code invokes rmpi functionality. (One test file illustrates how to use it, but has quit() as its first command.) What's the best way to handle this? In particular, what is the appropriate form for upload to CRAN? When I omitted rmpi from the DESCRITPION file R CMD check gave <quote> * checking

Hello all, I'm trying to use the package qvalue. Upon trying to install it I'm running into trouble. I re-downloaded and installed the most recent CRAN distribution of R which announced itself to have tcltk included. Now when I try to load qvalue I'm getting errors that seem to indicate that I need tcltk2. I tried going to get that package and loading it but both qvalue and tcltk seem

Well, I see ezstream 0.2.0 is downloadable, so I downloaded it and tried to compile. Unfortunately it won't compile for me. The configure script runs fine. Here's the output of make. Joel make all-recursive make[1]: Entering directory `/home/jbebel/ezstream-0.2.0' Making all in src make[2]: Entering directory `/home/jbebel/ezstream-0.2.0/src' source='ezstream.c'

Hi, All I got trouble on installing the qvalue package. Error message: package 'tcltk' does not have a name space [cchen1 at ibibmem Yale_CB]$ R CMD INSTALL qvalue.tar.gz * installing to library '/cchome/cchen1/R/x86_64-unknown-linux-gnu-library/2.10' * installing *source* package 'qvalue' ... ** R ** data ** inst ** preparing package for lazy loading Error : package

At 10:21 PM 1/8/2005, you wrote: >Well, I see ezstream 0.2.0 is downloadable, so I downloaded it and tried >to compile. Unfortunately it won't compile for me. The configure >script runs fine. Here's the output of make. > >Joel > >ezstream.c:406: warning: unused variable `ret' >ezstream.c: In function `main': >ezstream.c:576: error:

Dear list, I have been trying to run the function "qvalue" under the package qvalue on a vector with about 20 million values. > asso_p.qvalue<-qvalue(asso_p.vector) Error: cannot allocate vector of size 156513 Kb > sessionInfo() Version 2.3.1 (2006-06-01) i686-pc-linux-gnu attached base packages: [1] "methods" "stats" "graphics"

Hi, I am trying to install qvalue, however its giving installation error -> Error : package 'tcltk' does not have a name space ERROR: lazy loading failed for package ?qvalue? * removing ?/home/sbw/R/x86_64-unknown-linux-gnu-library/2.12/qvalue? The downloaded packages are in ?/tmp/RtmpKnS1X4/downloaded_packages? Warning message: In install.packages(pkgs = pkgs, repos = repos, ...)

FYI, I plan on implementing this for F31 if no issues arise. ---------- Forwarded message --------- From: Ben Cotton <bcotton at redhat.com> Date: Tue, 2 Jul 2019 at 10:55 Subject: Fedora 31 System-Wide change proposal: Automatic R runtime dependencies To: <devel-announce at lists.fedoraproject.org>, Development discussions related to Fedora <devel at lists.fedoraproject.org>

I am using storey's qvalue package but I keep on getting errors. Why is this? > qvalue(p, lambda=0.5)$pi0 [1] "ERROR: p-values not in valid range." Error in qvalue(p, lambda = 0.5)$pi0 : $ operator is invalid for atomic vectors -- Thanks, Jim. [[alternative HTML version deleted]]

Good Morning Everyone, I was going through my list of FTBFS packages today and I fixed all my R packages but 2: qvalue and xtable. qvalue requires ggplot2 xtable requires: lsmeans, spdep, splm, sphet, plm I am not doing any R anymore these days and in fact spot has been the one maintaining most of my R packages these days (thanks spot!!), so I am not really interested in maintaining more R

Hi, I have a huge dataset (53 million records). I have to calculate the p and q values of my data. How can I do it in R or perl? I have downloaded R (I'm completely new to R). and the package qvalue but I don't understand how can I call/use qvalue package with R. When I type library(qvalue), it gives me an error that this package doesn't exist. What should I do? Thanks! -- View this

In order to coerce Rails 1.2.x into supporting Unicode values for an attribute in a model, I found I had to do the following: 1) Change the underlying column type from varchar to nvarchar. 2) Prepend any quoted values going into nvarchar columns with a capital-letter-N, e. g. ''unicode'' becomes N''unicode'' In order to accomplish this, I modified

Dear All, In Storey's estimator of the proportion of true nulls, the estimator depends on the tuning parameter lamda. Suppose now that an estimator of this proportion has been obtained by the qvalue package, what is the lamda that corresponds to the estimate? How to get this lamda? Thanks, -Chee [[alternative HTML version deleted]]

Dear colleagues, This is not strictly a R question, but I hope it is ok to ask on the list. I fed a vector of p-values from about 20 million anova tests to the package q-value and obtained this output: > qsummary(asso_p.qvalue) Call: qvalue(p = asso_p.vec) pi0: 1 Cumulative number of significant calls: <1e-04 <0.001 <0.01 <0.025 <0.05 <0.1 <1

This is a follow-up to a message I posted yesterday concerning building R-1.6.2. After a deafening silence regarding that first message I decided to be fool-hardy and just comment out the line that seemed to be giving trouble in the file /usr/include/sys/stream.h. This worked for a while, but soon another error resulted:

Ronald, Grandstream products have a one year warrantee. If you don't have any luck with Pulver, contact us and we can probably get your phones exchanged. Please don't assume that your experience with Grandstream is typical. We sell a lot of these phones and the overwhelming majority of the purchasers are very happy with their units. The quality has improved tremendously over the last

Hi, I have asked this question before, but the solution I ended up with (see below) creates a note when running R CMD check. So I am trying again... I am developing a package B that, among other things, also offers some extra S3-methods for functions in package A if the user has installed A. I do not want to list A under Depends of B, as the dependency list of A is rather long, and most

I just checked IceCast out from CVS in an attempt to compile it again (I went through the whole build cycle just a couple of months ago), and I came across this error when I was building it: <p>source='yp.c' object='yp.o' libtool=no \ depfile='.deps/yp.Po' tmpdepfile='.deps/yp.TPo' \ depmode=gcc3 /bin/sh ../depcomp \ gcc -DPACKAGE_NAME=\"\"

Hi, I get an error from loadNamespace in the following situation (on R-2.15.3, R-devel 2013-03-26 r62409, and fresh R-3.0.0): - package A has an optional (suggests) dependency to package C, which is tested at load time in .onLoad, via require(). - package B depends on package A, which is loaded when B is lazy-loaded at install time. - package B is installed with package C installed If one now

I discovered an interesting problem with ezstream. I'm using version 1.2. I see 2 is listed on the website but appears to be a broken link. Otherwise I'd try it to see if it exhibits the same problem. I'm using ezstream as a fallback mount for a radio station. It plays a 30 second ogg file over and over. The ogg file is just a 5 second message with 25 seconds of silence