similar to: Pairwise combination

Hi there, I run two regressions: y = a1 + b1 * x + e1 y = a2 + b2 * z + e2 I want to test against the null hypothesis: b1 = b2. How do I design the test? I think I can add two equations together and divide both sides by 2: y = 0.5*(a1+a2) + 0.5*b1 * x + 0.5*b2 * z + e3, where e3 = 0.5*(e1 + e2). or just y = a3 + 0.5*b1 * x + 0.5*b2 * z + e3 If I run this new regression, I can test against

Hi there, Maybe people who know both R and econometrics will be able to answer my questions. I want to run panel regressions in R with fixed-effect. I know two ways to do it. First, I can include factor(grouping_variable) in my regression equation. Second, I plan to subtract group mean from my variables and run OLS panel regression with function lm(). I plan to do it with the second way because

Hi there, When I extract data from SQLite to R, the data types (or modes) of the extracted data seems to be determined by the value of the first row. Please see the following example. When I put the missing values first, the column extracted is of the mode character. > str(dbGetQuery(sql.industry, + "select pya_var from annual_data3 + order by

I'd like to write the summary of a dataframe to disk, so that it looks essentially the same as what you'd see on screen; but I can't seem to do it. Can someone tell me how? Thanks! ------------------------ Philip A. Viton City Planning, Ohio State University 275 West Woodruff Avenue, Columbus OH 43210 viton.1 at osu.edu

Dear Sir/Madam, I am running a R program for my SNP data. There are some errors when I run glm model in Hapassoc software, sometimes it is over the memory and sometimes the matrix is singular. I want to ingore these errors and excute the next statement. Otherwise, I have a big big trouble. Do you have some idea about this problem of ingore errors. Wish to get your help assp. thanks. -- Wei

On: R 2.8.1 / Ms Windows / R-Gui-R-console I have a long-ish function, and to re-assure myself that it's actually making progress I've arranged a set of messages to the console (using cat). But what happens is that the messages don't actually display until the function has finished, which sort of negates the purpose. However, if I hit Return after starting the function, then all

i am sure that there is a simple solution that i am just overlooking, but there is no logical test for = there is one for != and >,<, >=, <=... what do i do if i need to check if something IS EQUAL or is there an easy way, in working with a matrix of size n x 3, to sort the matrix by one of the columns? specifically what i am trying to do is i have a matrix with individual and

I'm new to bugs, so please bear with me. Can someone tell me if the following two models are doing the same thing? The reason I ask is that with the same data, the first (based on 4 separate coeffs a1--a4) takes about 50 secs, while the second (based on a vectorized form, a[]) takes about 300. The means are about the same, though R-hat's in the second version are quite a bit better.

Can someone tell me how to make up (eg) a library's html help files by hand? I think I ought to be able to use RCMD Rdconv for this but (R-2.10.0, MS-win) when I type (in a dos session) "rdcmd rdconv --help" I get a message to the effect that a perl script rdconv can't be opened. Can I do this from within R itself? And if so, how (in particular, what is the target file to

Dear list, Following up on an earlier post, I would like to reorder a dataset and compute pairwise correlations. But I'm having some real problems getting this done. My data looks something like: Participant Stimulus Measurement p1 s`1 5 p1 s`2 6.1 p1 s`3 7 p2 s`1 4.8 p2

I downloaded a US states+territories shapefile from http://www.weather.gov/geodata/catalog/national/html/us-state.htm and unzipped it into my working directory. Then in R (version 12.2.0 for ms-win32): library(rgdal) # Version: 0.6-28 library(spdep) # Version: 0.5-24 (loads sp: Version: 0.9-72) # read in the data states<-readOGR(".","s_01de10") summary(states) # now

I'm able to do this as follows, but am wondering if anyone knows a simpler way which still avoids explicit loops? > (mystring <- letters[1:5]) [1] "a" "b" "c" "d" "e" > unlist(sapply(mystring[-length(mystring)], + function(x) paste(x,mystring[(grep(x,mystring)+1):length(mystring)],sep=""))) a1 a2 a3

#Hello, #I have three data frames, X,Y and Z with two columns each and different numbers of rows. # creation of data frame X X.alleles <- c(1,5,6,7,8) X.Freq <- c(0.35, 0.15, 0.05 , 0.10, 0.35) Loc1 <- cbind( X.alleles,X.Freq) X <- data.frame(Loc1) #creation of data frame Y Y.alleles <- c(1,4,6,8) Y.Freq <- c(0.35, 0.35, 0.10, 0.20 )

Hi, I have a number of genes (columns) for which I want to examine pairwise associations of genotypes (each row is an individual)...For example (see data below), I would like to compare M1 to M2, M2 to M3, and M1 to M3 (i.e. does ac from M1 tend to be found with bc from M2 more often than expected.) Down stream I will be performing chi square tests for each pair. But I am looking for a way to

Hello everybody, I'm trying to subset a data frame "foo", which looks like this: sent cond raw V1 10 2 A 614 7 11 2 A 724 6 12 2 A 641 5 13 2 A 665 9 33 5 B 510 7 34 5 B 659 7 35 5 B 607 6 37 5 B 467 8 38 5 B 586 9 39 5 B 523 10 57 8 C 858 8 58 8 C 513 9 59 8 C

Hi, Given names <- c("a", "b", "c", "d"). I would like to generate "a vs. b", "a vs. c", "a vs. d", "b vs. c", "b vs. d", "c vs. d" Thanks [[alternative HTML version deleted]]

Hi , I am new to R . I am facing difficulty how to make pairwise comparisions. For example. I have a file which looks like below a b c d x 3 6 7 6 y 7 8 6 5 z 5 4 7 8 Here I need to look for the each pairwise comparisions (ab,ac,ad,bc,bd,cd for each row) For instance ,looking at first row, for x i need to look for ab values and take the min(3,6) >5 ,if its satistfies the count should be

Hello, I have a sequence of numbers: seq(1:50) and I would like to have all the possible combinations with this numbers without repeating any combination: 11, 12, 13, ... ,22,23,24,... How can I do it? Best, Dani -- Daniel Valverde Saub? Grup de Biologia Molecular de Llevats Facultat de Veterin?ria de la Universitat Aut?noma de Barcelona Edifici V, Campus UAB 08193 Cerdanyola del Vall?s-

Is there a method for creating "animations" using R. Or is there another piece of software (unix perferrably) that can generate a "movie" from many ps/eps/gif/jpg files? Thanks, Jeff. Jeff D. Hamann Hamann, Donald and Associates PO Box 1421 Corvallis, Oregon USA 97339-1421 Bus. 541-753-7333 Cell. 541-740-5988 jeff_hamann at hamanndonald.com www.hamanndonald.com

Hi all, I'm building a plot of the values in tmeant (below) against positions 1 to 5, using matplot. tmeant looks like this: case1 case2 pos1 861.8466 818.5909 pos2 961.2841 976.3466 pos3 878.6080 1262.8523 pos4 950.8011 1129.6080 pos5 968.1080 1063.3920 I also have lower (object tl) and upper (object tu) bounds on the confidence intervals as follows: tl: pos1