similar to: ggplot2 - help with intervals in geom plot

Hi all! I want to generate a heat map from an all-vs-all comparison. I have the data, already scaled to 0-1. However, I have the values only for the comparisons in one way, and not for the comparisons between the same group (which are always 1), i.e. I have half the matrix and am missing the other half and the diagonal. What is a good way to get it into a form that ggplot2 can use for the

Dear Ivo, dear list, (see: Message: 70 Date: Thu, 26 Mar 2009 21:39:19 +0000 From: ivowel at gmail.com Subject: [R] pgmm (Blundell-Bond) sample needed) I think I finally figured out how to replicate your supersimple GMM example with pgmm() so as to get the very same results as Stata. Having no other regressors in the formula initially drove me crazy. This was a case where simpler models are

# ggplot2 ggplot2 is a plotting system for R, based on the grammar of graphics, which tries to take the good parts of base and lattice graphics and avoid bad parts. It takes care of many of the fiddly details that make plotting a hassle (like drawing legends) as well as providing a powerful model of graphics that makes it easy to produce complex multi-layered graphics. Find out more at

# ggplot2 ggplot2 is a plotting system for R, based on the grammar of graphics, which tries to take the good parts of base and lattice graphics and avoid bad parts. It takes care of many of the fiddly details that make plotting a hassle (like drawing legends) as well as providing a powerful model of graphics that makes it easy to produce complex multi-layered graphics. Find out more at

Dear all, I want to : 1. Estimate a weighted 2D kernel. 2. Paint a heatmap on a ggmap. Here is some reproducible data / code (I got it from the internet) : s_rit <- structure(list(score = c(45, 60, 38, 98, 98, 53, 90, 42, 96, 45, 89, 18, 66, 2, 45, 98, 6, 83, 63, 86, 63, 81, 70, 8, 78, 15, 7, 86, 15, 63, 55, 13, 83, 76, 78, 70, 64, 88, 61, 78, 4, 7, 1, 70, 88, 58, 70, 58, 11, 45, 28, 42,

Hi, You might get more help from the R-sig-geo list, which is devoted to spatial topics. However. The *.asc file is an ArcGIS raster export format. You should use whatever the appropriate import commands are for your own gridded rainfall data. If you have a different format, you might or might not be able to import it directly with raster. ?raster will tell you more about the kinds of formats

Dear R users, I need to produce rainfall maps using R. I know that this is possible, I looked though the web, I found the example below reported (the author is Andrew Tredennick). I would ask you if this is the most performing way to make rainfall maps; if yes would someone be able to give me an example of how file.asc and pointfile.csv should be? If no would somebody please show me another way

After the recent discussion about future direction of the Mac OS X port, I was toying with the idea to make R a proper Mac OS X framework. There are several advantages: OS X locates frameworks automatically, therefore any program wishing to link against R has only to specify "-framework R" at link time. Furthermore versioning is supported, i.e. if a program is linked against R 1.7.1

I am having trouble getting data labels to display over the provinces in a GADM map of Canada. Specifically, I need the variable "Number" from the data set "by_province", grouped by "region", to appear on the corresponding regions of the map. The data set "by_province" looks like this: long lat order hole piece region

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Hello all! I have a problem with ggplot2 library. I want to do an heat map and the y variables are the year months. If I use the following code, he y values are in alphabetical order, but I want it in month order. The code is: library(reshape) library(ggplot2) library(scales) p <- ggplot(data.m, aes(variable, Month)) + geom_tile(aes(fill = value),

On Tue, Dec 23, 2014 at 10:34 AM, Frank Harrell <f.harrell at vanderbilt.edu> wrote: > I am thinking about adding several geom and stat extensions to ggplot2 > in the Hmisc package. To do this requires using non-exported ggplot2 > functions as discussed in > http://stackoverflow.com/questions/18108406/creating-a-custom-stat-object-in-ggplot2 > > If I use the needed

I am thinking about adding several geom and stat extensions to ggplot2 in the Hmisc package. To do this requires using non-exported ggplot2 functions as discussed in http://stackoverflow.com/questions/18108406/creating-a-custom-stat-object-in-ggplot2 If I use the needed ggplot2::: notation the package will no longer pass CRAN checks. Does anyone know of a solution? I'm assuming that

Hi, I've been looking at ways to make pyramid plots in R. I like the pyramid.plot method in plotrix as it seems the simplest to use and building them in ggplot looks a bit more code intensive than I'd like, being as I'm new to R. This package does pretty much what I need it to do, however I can't seem to scale the x axis labels. The other labels scale fine with labelcex. I

hail, I have a 7-stable: [matheus@xxx /usr/home/matheus]$ uname -a FreeBSD xxx 7.0-STABLE FreeBSD 7.0-STABLE #2: Sun Jul 6 15:03:26 BRT 2008 root@lamneth:/usr/obj/usr/src/sys/xxx_7 i386 and there exists three geom things. gconcat status Name Status Components concat/concat0 UP ad4 ad5 gmirror status Name Status Components

Hi all, Is it possible to change the filling of the squares used to represent the colour legend in a bar plot with ggplot? in this example, fillings are raven black, I'd like them white. ggplot(diamonds, aes(clarity, colour = cut)) + geom_bar() Regards -- ------------- Benoit Boulinguiez Ph.D student Ecole de Chimie de Rennes (ENSCR) Bureau 1.20 Equipe CIP UMR CNRS 6226 "Sciences

Hey, I'd like to apologize in advance if this is an old issue that everyone already dealt with in some new mechanism... But I compiled today's CVS for the first time in a few months, and when i tried to fire up programs/games with --desktop geom 640x480 (or any other dimensions) I get an "unknown option --desktop" error and the "usage" list pops up. I read the man

Fwiw the engine behind geom_raster needs explicit observation-per-row form for input (with no structural normalization), so conversion to points is perfectly proper here, albeit confusing in context. (It's closer to what graphics devices actually use ultimately, but the expansion is laid out very early in ggplot2 because there's no standard for intermediate forms.) Cheers, Mike On Wed,

I have a FreeBSD 6.2-based server running a 1.2TB graid3 volume, which consists of 5x 320gb SATA hard drives. I've been getting errors in /var/log/messages from the graid3 volume, which I suspect means an underlying fault with one of the disks, but is there any way to decipher which one of these drives is throwing errors? I've checked smartctl -a /dev/adXX but nothing shows up there..

Thank you Sarah and Mike for your explanations. My final objective is to produce maps (png image or any kind of extension I can import in LaTeX) where rainfall data are interpolated, using the Inverse Distance method or Kriging. My input file (pointfile.csv in the reported example) reports the station code, lat and long of the meteorological station and the rainfall value (which might be the